RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 DPH3Q96FX2 82 aa12.17□□□□□ -0.46
TREX1-205ENST00000625293 IGLV5-52A0A0A0MRZ9 124 aa12.16□□□□□ -0.46
TREX1-205ENST00000625293 DNAH5Q8TE73 4624 aa12.16□□□□□ -0.46
TREX1-205ENST00000625293 PKD1P98161 4303 aa12.15□□□□□ -0.46
TREX1-205ENST00000625293 HIST1H4AP62805 103 aaKnown RBP12.15□□□□□ -0.46
TREX1-205ENST00000625293 PLAC8Q9NZF1 115 aa12.15□□□□□ -0.46
TREX1-205ENST00000625293 C1orf137Q5JT78 98 aa12.14□□□□□ -0.47
TREX1-205ENST00000625293 A0A1W2PNM2 257 aa12.13□□□□□ -0.47
TREX1-205ENST00000625293 SPRR1BP22528 89 aa12.13□□□□□ -0.47
TREX1-205ENST00000625293 BIRC6Q9NR09 4857 aa12.12□□□□□ -0.47
TREX1-205ENST00000625293 UBE2AP49459 152 aa12.12□□□□□ -0.47
TREX1-205ENST00000625293 A0A087WVE0 104 aa12.1□□□□□ -0.47
TREX1-205ENST00000625293 A0A1B0GW54 56 aa12.1□□□□□ -0.47
TREX1-205ENST00000625293 IGLV8-61A0A075B6I0 122 aa12.1□□□□□ -0.47
TREX1-205ENST00000625293 Q8NBF4 154 aa12.1□□□□□ -0.47
TREX1-205ENST00000625293 A0A1B0GVY2 172 aa12.09□□□□□ -0.47
TREX1-205ENST00000625293 PKHD1P08F94 4074 aa12.09□□□□□ -0.47
TREX1-205ENST00000625293 LINC00336Q6ZUF6 198 aa12.09□□□□□ -0.47
TREX1-205ENST00000625293 CXCL6P80162 114 aa12.08□□□□□ -0.48
TREX1-205ENST00000625293 HAMPP81172 84 aa12.07□□□□□ -0.48
TREX1-205ENST00000625293 SPRR4Q96PI1 79 aa12.07□□□□□ -0.48
TREX1-205ENST00000625293 F8WEM9 126 aa12.06□□□□□ -0.48
TREX1-205ENST00000625293 KRTAP10-2P60368 255 aa12.04□□□□□ -0.48
TREX1-205ENST00000625293 IGFL1Q6UW32 110 aa12.03□□□□□ -0.48
TREX1-205ENST00000625293 PSORS1C2Q9UIG4 136 aa12.02□□□□□ -0.48
TREX1-205ENST00000625293 NREPQ16612 68 aa12.02□□□□□ -0.49
TREX1-205ENST00000625293 CRYGAP11844 174 aa12.01□□□□□ -0.49
TREX1-205ENST00000625293 DYNC1H1Q14204 4646 aaKnown RBP12□□□□□ -0.49
TREX1-205ENST00000625293 ATOX1O00244 68 aa12□□□□□ -0.49
TREX1-205ENST00000625293 A0A0G2JQZ4 141 aa11.98□□□□□ -0.49
TREX1-205ENST00000625293 SCXQ7RTU7 201 aa11.98□□□□□ -0.49
TREX1-205ENST00000625293 CCDC179H3BU77 68 aa11.97□□□□□ -0.49
TREX1-205ENST00000625293 FAM30AQ9NZY2 134 aa11.96□□□□□ -0.49
TREX1-205ENST00000625293 KIAA1109Q2LD37 5005 aa11.95□□□□□ -0.5
TREX1-205ENST00000625293 LINC00483Q53H64 154 aa11.95□□□□□ -0.5
TREX1-205ENST00000625293 SRRM2Q9UQ35 2752 aaKnown RBP11.94□□□□□ -0.5
TREX1-205ENST00000625293 ZNF861PO60384 105 aa11.93□□□□□ -0.5
TREX1-205ENST00000625293 Q6ZSA8 131 aa11.93□□□□□ -0.5
TREX1-205ENST00000625293 BPY2O14599 106 aa11.92□□□□□ -0.5
TREX1-205ENST00000625293 CIRBP-AS1Q8TBR5 109 aa11.91□□□□□ -0.5
TREX1-205ENST00000625293 LRP1BQ9NZR2 4599 aa11.91□□□□□ -0.5
TREX1-205ENST00000625293 IGKV4-1P06312 121 aa11.9□□□□□ -0.51
TREX1-205ENST00000625293 KRTAP10-1P60331 282 aa11.9□□□□□ -0.51
TREX1-205ENST00000625293 ZNF706Q9Y5V0 76 aaPredicted RBP11.89□□□□□ -0.51
TREX1-205ENST00000625293 COX7CP15954 63 aa11.88□□□□□ -0.51
TREX1-205ENST00000625293 Q8N9L7 120 aa11.87□□□□□ -0.51
TREX1-205ENST00000625293 UQCRQO14949 82 aa11.87□□□□□ -0.51
TREX1-205ENST00000625293 IGLV7-43P04211 117 aa11.87□□□□□ -0.51
TREX1-205ENST00000625293 SERP2Q8N6R1 65 aa11.86□□□□□ -0.51
TREX1-205ENST00000625293 A0A087WSZ3 146 aa11.85□□□□□ -0.51
TREX1-205ENST00000625293 DSCR10P59022 87 aa11.82□□□□□ -0.52
TREX1-205ENST00000625293 RPL37AP61513 92 aaKnown RBP11.81□□□□□ -0.52
TREX1-205ENST00000625293 IGLV9-49A0A0B4J1Y8 123 aa11.79□□□□□ -0.52
TREX1-205ENST00000625293 HERC2O95714 4834 aa11.79□□□□□ -0.52
TREX1-205ENST00000625293 APOBP04114 4563 aaKnown RBP11.78□□□□□ -0.52
TREX1-205ENST00000625293 RYR1P21817 5038 aa11.78□□□□□ -0.52
TREX1-205ENST00000625293 C9orf153Q5TBE3 101 aa11.77□□□□□ -0.52
TREX1-205ENST00000625293 ANAPC11Q9NYG5 84 aa11.76□□□□□ -0.53
TREX1-205ENST00000625293 KRTAP17-1Q9BYP8 105 aa11.75□□□□□ -0.53
TREX1-205ENST00000625293 HSPG2P98160 4391 aa11.75□□□□□ -0.53
TREX1-205ENST00000625293 K7EQZ3 153 aa11.74□□□□□ -0.53
TREX1-205ENST00000625293 SMIM20Q8N5G0 67 aa11.74□□□□□ -0.53
TREX1-205ENST00000625293 TRAV7A0A075B6U4 112 aa11.74□□□□□ -0.53
TREX1-205ENST00000625293 LINC00472Q9H8W2 130 aa11.72□□□□□ -0.53
TREX1-205ENST00000625293 MOBPQ13875 183 aa11.72□□□□□ -0.53
TREX1-205ENST00000625293 DEFB116Q30KQ4 102 aa11.71□□□□□ -0.54
TREX1-205ENST00000625293 CYSTM1Q9H1C7 97 aa11.66□□□□□ -0.54
TREX1-205ENST00000625293 VPS13BQ7Z7G8 4022 aa11.65□□□□□ -0.54
TREX1-205ENST00000625293 OCR1Q9BZK8 76 aa11.64□□□□□ -0.55
TREX1-205ENST00000625293 CDK2AP2O75956 126 aa11.64□□□□□ -0.55
TREX1-205ENST00000625293 Q96NJ1 140 aa11.63□□□□□ -0.55
TREX1-205ENST00000625293 KRTAP4-5Q9BYR2 181 aa11.62□□□□□ -0.55
TREX1-205ENST00000625293 HRCT1Q6UXD1 115 aa11.62□□□□□ -0.55
TREX1-205ENST00000625293 FAT1Q14517 4588 aa11.61□□□□□ -0.55
TREX1-205ENST00000625293 A8MWP4 228 aa11.61□□□□□ -0.55
TREX1-205ENST00000625293 HCG22E2RYF7 251 aa11.61□□□□□ -0.55
TREX1-205ENST00000625293 PRR15Q8IV56 129 aa11.6□□□□□ -0.55
TREX1-205ENST00000625293 SS18L2Q9UHA2 77 aa11.6□□□□□ -0.55
TREX1-205ENST00000625293 J3KT08 172 aa11.59□□□□□ -0.55
TREX1-205ENST00000625293 C20orf197Q8N268 126 aa11.59□□□□□ -0.55
TREX1-205ENST00000625293 SSBP3-AS1Q7Z2R9 100 aa11.58□□□□□ -0.56
TREX1-205ENST00000625293 SMR3BP02814 79 aaPredicted RBP11.56□□□□□ -0.56
TREX1-205ENST00000625293 FAM229BQ4G0N7 80 aa11.55□□□□□ -0.56
TREX1-205ENST00000625293 PCLOQ9Y6V0 5065 aa11.55□□□□□ -0.56
TREX1-205ENST00000625293 A0A087X002 238 aa11.54□□□□□ -0.56
TREX1-205ENST00000625293 KRTAP29-1A8MX34 341 aaPredicted RBP11.54□□□□□ -0.56
TREX1-205ENST00000625293 KRTAP1-4P0C5Y4 121 aa11.54□□□□□ -0.56
TREX1-205ENST00000625293 CD164Q04900 197 aa11.54□□□□□ -0.56
TREX1-205ENST00000625293 KLKP1Q107X0 134 aa11.54□□□□□ -0.56
TREX1-205ENST00000625293 ABCA13Q86UQ4 5058 aa11.54□□□□□ -0.56
TREX1-205ENST00000625293 KRTAP13-2Q52LG2 175 aa11.54□□□□□ -0.56
TREX1-205ENST00000625293 WFDC13Q8IUB5 93 aa11.5□□□□□ -0.57
TREX1-205ENST00000625293 Q8N1X5 172 aa11.49□□□□□ -0.57
TREX1-205ENST00000625293 TMEM254Q8TBM7 123 aa11.48□□□□□ -0.57
TREX1-205ENST00000625293 SNURFQ9Y675 71 aa11.48□□□□□ -0.57
TREX1-205ENST00000625293 MMP24-AS1A0A0U1RRL7 71 aa11.47□□□□□ -0.57
TREX1-205ENST00000625293 TMEM258P61165 79 aa11.47□□□□□ -0.57
TREX1-205ENST00000625293 NDUFB1O75438 58 aa11.46□□□□□ -0.57
TREX1-205ENST00000625293 CASC2Q6XLA1 102 aa11.46□□□□□ -0.57
TREX1-205ENST00000625293 A0A0U1RQV1 116 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms