RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 LOC101927531A0A1B0GV80 90 aa7.9□□□□□ -1.14
SRRT-216ENST00000618262 DYNC2H1Q8NCM8 4307 aaKnown RBP7.9□□□□□ -1.15
SRRT-216ENST00000618262 VPS13DQ5THJ4 4388 aa7.89□□□□□ -1.15
SRRT-216ENST00000618262 LELP1Q5T871 98 aa7.89□□□□□ -1.15
SRRT-216ENST00000618262 IGKV2-28A0A075B6P5 120 aa7.89□□□□□ -1.15
SRRT-216ENST00000618262 IGKV2D-28P01615 120 aa7.89□□□□□ -1.15
SRRT-216ENST00000618262 KRTAP1-5Q9BYS1 174 aa7.89□□□□□ -1.15
SRRT-216ENST00000618262 PLA2G2DQ9UNK4 145 aa7.89□□□□□ -1.15
SRRT-216ENST00000618262 FRAS1Q86XX4 4008 aa7.88□□□□□ -1.15
SRRT-216ENST00000618262 CDKN2A-AS1Q9UH64 79 aa7.87□□□□□ -1.15
SRRT-216ENST00000618262 H3BNG1 76 aa7.86□□□□□ -1.15
SRRT-216ENST00000618262 ASB16-AS1Q495Z4 193 aa7.86□□□□□ -1.15
SRRT-216ENST00000618262 PDE6GP18545 87 aa7.86□□□□□ -1.15
SRRT-216ENST00000618262 FAM104AQ969W3 186 aa7.86□□□□□ -1.15
SRRT-216ENST00000618262 LCE6AA0A183 80 aa7.85□□□□□ -1.15
SRRT-216ENST00000618262 DNAH2Q9P225 4427 aa7.85□□□□□ -1.15
SRRT-216ENST00000618262 ZCCHC13Q8WW36 166 aaKnown RBP7.85□□□□□ -1.15
SRRT-216ENST00000618262 IGLV5-39A0A0G2JS06 123 aa7.84□□□□□ -1.15
SRRT-216ENST00000618262 SACSQ9NZJ4 4579 aa7.83□□□□□ -1.16
SRRT-216ENST00000618262 IGKV2D-24A0A075B6R9 120 aa7.83□□□□□ -1.16
SRRT-216ENST00000618262 IGLV5-45A0A087WSX0 123 aa7.83□□□□□ -1.16
SRRT-216ENST00000618262 ELOF1P60002 83 aaKnown RBP7.83□□□□□ -1.16
SRRT-216ENST00000618262 RYR3Q15413 4870 aa7.83□□□□□ -1.16
SRRT-216ENST00000618262 COX6A2Q02221 97 aa7.82□□□□□ -1.16
SRRT-216ENST00000618262 NDUFB1O75438 58 aa7.82□□□□□ -1.16
SRRT-216ENST00000618262 ROMO1P60602 79 aa7.82□□□□□ -1.16
SRRT-216ENST00000618262 REG3GQ6UW15 175 aa7.82□□□□□ -1.16
SRRT-216ENST00000618262 IGKV4-1P06312 121 aa7.81□□□□□ -1.16
SRRT-216ENST00000618262 NOTCH2NLQ7Z3S9 236 aa7.81□□□□□ -1.16
SRRT-216ENST00000618262 LINC00208Q96KT6 92 aa7.81□□□□□ -1.16
SRRT-216ENST00000618262 CSAG1Q6PB30 78 aa7.8□□□□□ -1.16
SRRT-216ENST00000618262 Q9BRP9 147 aa7.79□□□□□ -1.16
SRRT-216ENST00000618262 LINC00959A0A1B0GUT2 108 aa7.78□□□□□ -1.16
SRRT-216ENST00000618262 Q8N9L7 120 aa7.78□□□□□ -1.16
SRRT-216ENST00000618262 KRTAP16-1A8MUX0 517 aa7.77□□□□□ -1.16
SRRT-216ENST00000618262 LINC01556Q5JQF7 62 aa7.77□□□□□ -1.16
SRRT-216ENST00000618262 NBDYA0A0U1RRE5 68 aa7.77□□□□□ -1.17
SRRT-216ENST00000618262 DNAH10OSP0CZ25 163 aa7.77□□□□□ -1.17
SRRT-216ENST00000618262 TOMM7Q9P0U1 55 aa7.77□□□□□ -1.17
SRRT-216ENST00000618262 LINC00242Q5T6M2 205 aa7.76□□□□□ -1.17
SRRT-216ENST00000618262 A0A1B0GUV1 79 aa7.76□□□□□ -1.17
SRRT-216ENST00000618262 SMIM1B2RUZ4 78 aa7.75□□□□□ -1.17
SRRT-216ENST00000618262 CDK2AP2O75956 126 aa7.75□□□□□ -1.17
SRRT-216ENST00000618262 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.74□□□□□ -1.17
SRRT-216ENST00000618262 SEC61BP60468 96 aaKnown RBP7.74□□□□□ -1.17
SRRT-216ENST00000618262 RYR2Q92736 4967 aa7.74□□□□□ -1.17
SRRT-216ENST00000618262 A0A087X002 238 aa7.74□□□□□ -1.17
SRRT-216ENST00000618262 SPINK7P58062 85 aa7.74□□□□□ -1.17
SRRT-216ENST00000618262 COX7B2Q8TF08 81 aa7.74□□□□□ -1.17
SRRT-216ENST00000618262 SMIM29Q86T20 159 aa7.73□□□□□ -1.17
SRRT-216ENST00000618262 TNP2Q05952 138 aa7.73□□□□□ -1.17
SRRT-216ENST00000618262 A0A1W2PNM2 257 aa7.72□□□□□ -1.17
SRRT-216ENST00000618262 Q6ZR54 194 aa7.72□□□□□ -1.17
SRRT-216ENST00000618262 LINC00158P58513 81 aa7.71□□□□□ -1.17
SRRT-216ENST00000618262 PRR34Q9NV39 138 aa7.71□□□□□ -1.17
SRRT-216ENST00000618262 RTL8CO15255 209 aa7.71□□□□□ -1.18
SRRT-216ENST00000618262 ETDCA0A1B0GVM5 59 aa7.7□□□□□ -1.18
SRRT-216ENST00000618262 IGLV9-49A0A0B4J1Y8 123 aa7.68□□□□□ -1.18
SRRT-216ENST00000618262 SPANXA2-OT1Q8N9U9 137 aa7.68□□□□□ -1.18
SRRT-216ENST00000618262 MIR22HGQ0VDD5 57 aa7.68□□□□□ -1.18
SRRT-216ENST00000618262 DNAH6Q9C0G6 4158 aa7.68□□□□□ -1.18
SRRT-216ENST00000618262 H3BQ85 93 aa7.68□□□□□ -1.18
SRRT-216ENST00000618262 LINC01558Q9Y6Z2 57 aa7.68□□□□□ -1.18
SRRT-216ENST00000618262 PKHD1P08F94 4074 aa7.67□□□□□ -1.18
SRRT-216ENST00000618262 SPAG11BQ08648 103 aa7.67□□□□□ -1.18
SRRT-216ENST00000618262 SPAG11AQ6PDA7 123 aa7.67□□□□□ -1.18
SRRT-216ENST00000618262 ALMS1Q8TCU4 4167 aa7.66□□□□□ -1.18
SRRT-216ENST00000618262 KRTAP26-1Q6PEX3 210 aa7.65□□□□□ -1.18
SRRT-216ENST00000618262 C10orf25Q5T742 122 aa7.64□□□□□ -1.19
SRRT-216ENST00000618262 LINC00575Q6W349 94 aa7.64□□□□□ -1.19
SRRT-216ENST00000618262 FAT2Q9NYQ8 4349 aa7.64□□□□□ -1.19
SRRT-216ENST00000618262 C15orf56Q8N910 161 aa7.63□□□□□ -1.19
SRRT-216ENST00000618262 ST20-AS1Q8NBB2 130 aa7.63□□□□□ -1.19
SRRT-216ENST00000618262 PLAC8Q9NZF1 115 aa7.63□□□□□ -1.19
SRRT-216ENST00000618262 UNQ6190/PRO20217Q6UXQ8 127 aa7.63□□□□□ -1.19
SRRT-216ENST00000618262 Q6ZRN7 208 aaPredicted RBP7.62□□□□□ -1.19
SRRT-216ENST00000618262 COX7BP24311 80 aa7.61□□□□□ -1.19
SRRT-216ENST00000618262 A0A1B0GW54 56 aa7.6□□□□□ -1.19
SRRT-216ENST00000618262 COA5Q86WW8 74 aa7.6□□□□□ -1.19
SRRT-216ENST00000618262 DNAH17Q9UFH2 4485 aa7.6□□□□□ -1.19
SRRT-216ENST00000618262 P0C880 135 aa7.6□□□□□ -1.19
SRRT-216ENST00000618262 CAMK2N2Q96S95 79 aa7.6□□□□□ -1.19
SRRT-216ENST00000618262 HECTD4Q9Y4D8 3996 aa7.59□□□□□ -1.19
SRRT-216ENST00000618262 CNBPP62633 177 aaKnown RBP7.59□□□□□ -1.2
SRRT-216ENST00000618262 EPPK1P58107 5090 aaKnown RBP7.58□□□□□ -1.2
SRRT-216ENST00000618262 CHTF8P0CG12 524 aa7.58□□□□□ -1.2
SRRT-216ENST00000618262 KRTAP10-2P60368 255 aa7.58□□□□□ -1.2
SRRT-216ENST00000618262 A0A087WTM6 91 aa7.58□□□□□ -1.2
SRRT-216ENST00000618262 IGKV2-24A0A0C4DH68 120 aa7.58□□□□□ -1.2
SRRT-216ENST00000618262 XAGE1AQ9HD64 81 aa7.58□□□□□ -1.2
SRRT-216ENST00000618262 DNAH11Q96DT5 4516 aa7.57□□□□□ -1.2
SRRT-216ENST00000618262 Q6ZQY7 126 aa7.56□□□□□ -1.2
SRRT-216ENST00000618262 KCNQ1DNQ9H478 68 aa7.56□□□□□ -1.2
SRRT-216ENST00000618262 PKD1P98161 4303 aa7.56□□□□□ -1.2
SRRT-216ENST00000618262 Q8NDZ9 215 aa7.56□□□□□ -1.2
SRRT-216ENST00000618262 C6orf48Q9UBA6 75 aa7.54□□□□□ -1.2
SRRT-216ENST00000618262 DNAH5Q8TE73 4624 aa7.54□□□□□ -1.2
SRRT-216ENST00000618262 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.53□□□□□ -1.2
SRRT-216ENST00000618262 H0Y9P7 68 aa7.52□□□□□ -1.21
SRRT-216ENST00000618262 LUZP6Q538Z0 58 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms