RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 CRYGAP11844 174 aa6.96□□□□□ -1.3
TARDBP-217ENST00000616545 NDUFV3P56181 108 aaKnown RBP6.96□□□□□ -1.3
TARDBP-217ENST00000616545 ANKRD29Q8N6D5 301 aa6.96□□□□□ -1.3
TARDBP-217ENST00000616545 JMJD7-PLA2G4BH0Y9G9 81 aa6.95□□□□□ -1.3
TARDBP-217ENST00000616545 SMIM29Q86T20 159 aa6.95□□□□□ -1.3
TARDBP-217ENST00000616545 KRTAP17-1Q9BYP8 105 aa6.95□□□□□ -1.3
TARDBP-217ENST00000616545 IGLV8-61A0A075B6I0 122 aa6.94□□□□□ -1.3
TARDBP-217ENST00000616545 PRO0461Q9UI25 63 aa6.94□□□□□ -1.3
TARDBP-217ENST00000616545 RYR1P21817 5038 aa6.93□□□□□ -1.3
TARDBP-217ENST00000616545 C21orf62-AS1Q17RA5 79 aa6.93□□□□□ -1.3
TARDBP-217ENST00000616545 Q6JHZ5 121 aa6.93□□□□□ -1.3
TARDBP-217ENST00000616545 SSBP3-AS1Q7Z2R9 100 aa6.93□□□□□ -1.3
TARDBP-217ENST00000616545 VPS13BQ7Z7G8 4022 aa6.92□□□□□ -1.3
TARDBP-217ENST00000616545 Q8NBF4 154 aa6.92□□□□□ -1.3
TARDBP-217ENST00000616545 RBM3P98179 157 aaKnown RBP6.91□□□□□ -1.3
TARDBP-217ENST00000616545 BIRC6Q9NR09 4857 aa6.91□□□□□ -1.3
TARDBP-217ENST00000616545 KIAA1109Q2LD37 5005 aa6.9□□□□□ -1.3
TARDBP-217ENST00000616545 HSPG2P98160 4391 aa6.9□□□□□ -1.3
TARDBP-217ENST00000616545 OXTP01178 125 aa6.9□□□□□ -1.3
TARDBP-217ENST00000616545 PDE6GP18545 87 aa6.9□□□□□ -1.3
TARDBP-217ENST00000616545 SMCPP49901 116 aaPredicted RBP6.9□□□□□ -1.3
TARDBP-217ENST00000616545 ANAPC11Q9NYG5 84 aa6.9□□□□□ -1.3
TARDBP-217ENST00000616545 A0A087X002 238 aa6.89□□□□□ -1.31
TARDBP-217ENST00000616545 IGLV9-49A0A0B4J1Y8 123 aa6.89□□□□□ -1.31
TARDBP-217ENST00000616545 C9orf153Q5TBE3 101 aa6.89□□□□□ -1.31
TARDBP-217ENST00000616545 MTURNQ8N3F0 131 aa6.89□□□□□ -1.31
TARDBP-217ENST00000616545 C3orf22Q8N5N4 141 aa6.89□□□□□ -1.31
TARDBP-217ENST00000616545 TYMSOSQ8TAI1 123 aa6.89□□□□□ -1.31
TARDBP-217ENST00000616545 OBSCN-AS1Q96MR7 158 aa6.89□□□□□ -1.31
TARDBP-217ENST00000616545 DSCR8Q96T75 97 aa6.89□□□□□ -1.31
TARDBP-217ENST00000616545 MOBPQ13875 183 aa6.88□□□□□ -1.31
TARDBP-217ENST00000616545 KRTAP4-5Q9BYR2 181 aa6.88□□□□□ -1.31
TARDBP-217ENST00000616545 KRTAP13-2Q52LG2 175 aa6.87□□□□□ -1.31
TARDBP-217ENST00000616545 TEN1Q86WV5 123 aa6.87□□□□□ -1.31
TARDBP-217ENST00000616545 SRRM2Q9UQ35 2752 aaKnown RBP6.86□□□□□ -1.31
TARDBP-217ENST00000616545 TRBV7-4A0A0J9YYF1 115 aa6.86□□□□□ -1.31
TARDBP-217ENST00000616545 CD164Q04900 197 aa6.86□□□□□ -1.31
TARDBP-217ENST00000616545 PRR26Q8N8Z3 221 aa6.86□□□□□ -1.31
TARDBP-217ENST00000616545 LOC110117498A0A087WWA1 95 aa6.85□□□□□ -1.31
TARDBP-217ENST00000616545 SPAG11AQ6PDA7 123 aa6.85□□□□□ -1.31
TARDBP-217ENST00000616545 A0A1B0GW54 56 aa6.84□□□□□ -1.31
TARDBP-217ENST00000616545 KRTAP29-1A8MX34 341 aaPredicted RBP6.84□□□□□ -1.31
TARDBP-217ENST00000616545 KRTAP10-8P60410 259 aa6.84□□□□□ -1.31
TARDBP-217ENST00000616545 ETDBQ3ZM63 59 aa6.83□□□□□ -1.32
TARDBP-217ENST00000616545 Q6Q795 121 aa6.83□□□□□ -1.32
TARDBP-217ENST00000616545 IGFL1Q6UW32 110 aa6.83□□□□□ -1.32
TARDBP-217ENST00000616545 FAT1Q14517 4588 aa6.82□□□□□ -1.32
TARDBP-217ENST00000616545 RPS29P62273 56 aaKnown RBP6.81□□□□□ -1.32
TARDBP-217ENST00000616545 Q6ZQT0 140 aa6.81□□□□□ -1.32
TARDBP-217ENST00000616545 LINC00304Q8N9R0 145 aa6.81□□□□□ -1.32
TARDBP-217ENST00000616545 C14orf132Q9NPU4 83 aa6.81□□□□□ -1.32
TARDBP-217ENST00000616545 SPINK1P00995 79 aa6.8□□□□□ -1.32
TARDBP-217ENST00000616545 CCKP06307 115 aa6.8□□□□□ -1.32
TARDBP-217ENST00000616545 A0A1B0GV72 72 aa6.79□□□□□ -1.32
TARDBP-217ENST00000616545 FLG2Q5D862 2391 aaPredicted RBP6.79□□□□□ -1.32
TARDBP-217ENST00000616545 TRBV7-7A0A0K0K1E9 115 aa6.77□□□□□ -1.33
TARDBP-217ENST00000616545 A0A1W2PNM2 257 aa6.77□□□□□ -1.33
TARDBP-217ENST00000616545 MT1HL1P0DM35 61 aa6.77□□□□□ -1.33
TARDBP-217ENST00000616545 Q5XG85 94 aa6.77□□□□□ -1.33
TARDBP-217ENST00000616545 LIMD2Q9BT23 127 aa6.77□□□□□ -1.33
TARDBP-217ENST00000616545 SS18L2Q9UHA2 77 aa6.76□□□□□ -1.33
TARDBP-217ENST00000616545 HERC2O95714 4834 aa6.75□□□□□ -1.33
TARDBP-217ENST00000616545 J3QR89 54 aa6.74□□□□□ -1.33
TARDBP-217ENST00000616545 VPS25Q9BRG1 176 aa6.74□□□□□ -1.33
TARDBP-217ENST00000616545 A0A0G2JQZ4 141 aa6.73□□□□□ -1.33
TARDBP-217ENST00000616545 ACYP1P07311 99 aa6.73□□□□□ -1.33
TARDBP-217ENST00000616545 ASB16-AS1Q495Z4 193 aa6.73□□□□□ -1.33
TARDBP-217ENST00000616545 PKHD1L1Q86WI1 4243 aa6.72□□□□□ -1.33
TARDBP-217ENST00000616545 FAM240AA0A1B0GVK7 77 aa6.72□□□□□ -1.33
TARDBP-217ENST00000616545 HRCT1Q6UXD1 115 aa6.72□□□□□ -1.33
TARDBP-217ENST00000616545 A0A087WSZ3 146 aa6.71□□□□□ -1.34
TARDBP-217ENST00000616545 K7ERU9 68 aa6.66□□□□□ -1.34
TARDBP-217ENST00000616545 NREPQ16612 68 aa6.66□□□□□ -1.34
TARDBP-217ENST00000616545 UBL5Q9BZL1 73 aa6.66□□□□□ -1.34
TARDBP-217ENST00000616545 DMBT1Q9UGM3 2413 aaPredicted RBP6.65□□□□□ -1.34
TARDBP-217ENST00000616545 J3KT08 172 aa6.64□□□□□ -1.35
TARDBP-217ENST00000616545 LINC00846Q9NV44 126 aa6.64□□□□□ -1.35
TARDBP-217ENST00000616545 FP248Q71RG6 208 aaPredicted RBP6.63□□□□□ -1.35
TARDBP-217ENST00000616545 LINC00472Q9H8W2 130 aa6.63□□□□□ -1.35
TARDBP-217ENST00000616545 C1orf195Q5TG92 126 aa6.62□□□□□ -1.35
TARDBP-217ENST00000616545 Q6ZVQ6 151 aa6.61□□□□□ -1.35
TARDBP-217ENST00000616545 LRP1Q07954 4544 aaKnown RBP6.59□□□□□ -1.35
TARDBP-217ENST00000616545 Q96NJ1 140 aa6.59□□□□□ -1.35
TARDBP-217ENST00000616545 MYCBP2O75592 4640 aa6.58□□□□□ -1.36
TARDBP-217ENST00000616545 SIGMAR1Q99720 223 aa6.58□□□□□ -1.36
TARDBP-217ENST00000616545 ABCA13Q86UQ4 5058 aa6.58□□□□□ -1.36
TARDBP-217ENST00000616545 BPY2O14599 106 aa6.57□□□□□ -1.36
TARDBP-217ENST00000616545 IGKV4-1P06312 121 aa6.57□□□□□ -1.36
TARDBP-217ENST00000616545 ATP5EP2Q5VTU8 51 aa6.57□□□□□ -1.36
TARDBP-217ENST00000616545 LINC00643Q86TS7 51 aa6.57□□□□□ -1.36
TARDBP-217ENST00000616545 FAT3Q8TDW7 4589 aa6.56□□□□□ -1.36
TARDBP-217ENST00000616545 NDUFB1O75438 58 aa6.56□□□□□ -1.36
TARDBP-217ENST00000616545 CXCL6P80162 114 aa6.56□□□□□ -1.36
TARDBP-217ENST00000616545 TNXBP22105 4242 aa6.55□□□□□ -1.36
TARDBP-217ENST00000616545 A8MWP4 228 aa6.54□□□□□ -1.36
TARDBP-217ENST00000616545 IGLV7-46A0A075B6I9 117 aa6.53□□□□□ -1.36
TARDBP-217ENST00000616545 RETNLBQ9BQ08 111 aa6.53□□□□□ -1.36
TARDBP-217ENST00000616545 DEFB116Q30KQ4 102 aa6.52□□□□□ -1.37
TARDBP-217ENST00000616545 PRR4Q16378 134 aa6.51□□□□□ -1.37
TARDBP-217ENST00000616545 CDIP1Q9H305 208 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms