RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 ZCCHC13Q8WW36 166 aaKnown RBP6.82□□□□□ -1.32
SHANK2-219ENST00000606715 IGSF10Q6WRI0 2623 aa6.81□□□□□ -1.32
SHANK2-219ENST00000606715 OXTP01178 125 aa6.81□□□□□ -1.32
SHANK2-219ENST00000606715 BAHCC1Q9P281 2608 aa6.8□□□□□ -1.32
SHANK2-219ENST00000606715 SPRR1AP35321 89 aa6.79□□□□□ -1.32
SHANK2-219ENST00000606715 R4GN34 69 aa6.79□□□□□ -1.32
SHANK2-219ENST00000606715 A0A1B0GU33 70 aa6.78□□□□□ -1.32
SHANK2-219ENST00000606715 STAB1Q9NY15 2570 aa6.78□□□□□ -1.32
SHANK2-219ENST00000606715 TEP1Q99973 2627 aaKnown RBP6.78□□□□□ -1.32
SHANK2-219ENST00000606715 LAMA3Q16787 3333 aa6.78□□□□□ -1.32
SHANK2-219ENST00000606715 COL6A5A8TX70 2615 aa6.78□□□□□ -1.32
SHANK2-219ENST00000606715 MKI67P46013 3256 aaKnown RBP6.75□□□□□ -1.33
SHANK2-219ENST00000606715 SPRR1BP22528 89 aa6.75□□□□□ -1.33
SHANK2-219ENST00000606715 PLAC4Q8WY50 150 aa6.75□□□□□ -1.33
SHANK2-219ENST00000606715 SETXQ7Z333 2677 aaKnown RBP6.75□□□□□ -1.33
SHANK2-219ENST00000606715 KRTAP10-1P60331 282 aa6.74□□□□□ -1.33
SHANK2-219ENST00000606715 MGAQ8IWI9 3026 aa6.74□□□□□ -1.33
SHANK2-219ENST00000606715 TEX15Q9BXT5 2789 aa6.74□□□□□ -1.33
SHANK2-219ENST00000606715 SPINK7P58062 85 aa6.73□□□□□ -1.33
SHANK2-219ENST00000606715 H3BS24 57 aa6.72□□□□□ -1.33
SHANK2-219ENST00000606715 KRTAP26-1Q6PEX3 210 aa6.71□□□□□ -1.33
SHANK2-219ENST00000606715 KRTAP1-5Q9BYS1 174 aa6.71□□□□□ -1.33
SHANK2-219ENST00000606715 AKAP13Q12802 2813 aa6.71□□□□□ -1.33
SHANK2-219ENST00000606715 BRCA2P51587 3418 aa6.7□□□□□ -1.34
SHANK2-219ENST00000606715 KRTAP10-2P60368 255 aa6.7□□□□□ -1.34
SHANK2-219ENST00000606715 A0A0A0MQY5 61 aa6.7□□□□□ -1.34
SHANK2-219ENST00000606715 Q6ZR54 194 aa6.68□□□□□ -1.34
SHANK2-219ENST00000606715 DMAC1Q96GE9 116 aa6.68□□□□□ -1.34
SHANK2-219ENST00000606715 FP248Q71RG6 208 aaPredicted RBP6.67□□□□□ -1.34
SHANK2-219ENST00000606715 OCR1Q9BZK8 76 aa6.67□□□□□ -1.34
SHANK2-219ENST00000606715 DSPP15924 2871 aaKnown RBP6.66□□□□□ -1.34
SHANK2-219ENST00000606715 Q75L30 129 aa6.64□□□□□ -1.35
SHANK2-219ENST00000606715 PRAC1Q96KF2 57 aa6.64□□□□□ -1.35
SHANK2-219ENST00000606715 Q8N9P0 234 aaPredicted RBP6.64□□□□□ -1.35
SHANK2-219ENST00000606715 CHD6Q8TD26 2715 aa6.63□□□□□ -1.35
SHANK2-219ENST00000606715 M0QZ58 72 aa6.63□□□□□ -1.35
SHANK2-219ENST00000606715 MMP24-AS1A0A0U1RRL7 71 aa6.62□□□□□ -1.35
SHANK2-219ENST00000606715 Q8NDZ9 215 aa6.61□□□□□ -1.35
SHANK2-219ENST00000606715 Q5W150 140 aa6.61□□□□□ -1.35
SHANK2-219ENST00000606715 PRUNE2Q8WUY3 3088 aa6.6□□□□□ -1.35
SHANK2-219ENST00000606715 NOTCH1P46531 2555 aa6.59□□□□□ -1.35
SHANK2-219ENST00000606715 A0A0C4DFX4 3053 aa6.59□□□□□ -1.35
SHANK2-219ENST00000606715 GCN1Q92616 2671 aaKnown RBP6.59□□□□□ -1.35
SHANK2-219ENST00000606715 LINC01558Q9Y6Z2 57 aa6.58□□□□□ -1.36
SHANK2-219ENST00000606715 LINC00472Q9H8W2 130 aa6.56□□□□□ -1.36
SHANK2-219ENST00000606715 WDFY4Q6ZS81 3184 aa6.56□□□□□ -1.36
SHANK2-219ENST00000606715 CFAP54Q96N23 3096 aa6.55□□□□□ -1.36
SHANK2-219ENST00000606715 NSD1Q96L73 2696 aaPredicted RBP6.52□□□□□ -1.37
SHANK2-219ENST00000606715 UNC80Q8N2C7 3258 aa6.52□□□□□ -1.37
SHANK2-219ENST00000606715 ITPR2Q14571 2701 aa6.52□□□□□ -1.37
SHANK2-219ENST00000606715 KMT2BQ9UMN6 2715 aaPredicted RBP6.52□□□□□ -1.37
SHANK2-219ENST00000606715 FLG2Q5D862 2391 aaPredicted RBP6.51□□□□□ -1.37
SHANK2-219ENST00000606715 NBEAL1Q6ZS30 2694 aa6.51□□□□□ -1.37
SHANK2-219ENST00000606715 UBR5O95071 2799 aaPredicted RBP6.51□□□□□ -1.37
SHANK2-219ENST00000606715 LAMA2P24043 3122 aaKnown RBP6.5□□□□□ -1.37
SHANK2-219ENST00000606715 ADM2Q7Z4H4 148 aa6.5□□□□□ -1.37
SHANK2-219ENST00000606715 KRTAP4-16G5E9R7 235 aaPredicted RBP6.5□□□□□ -1.37
SHANK2-219ENST00000606715 Q6ZRN7 208 aaPredicted RBP6.49□□□□□ -1.37
SHANK2-219ENST00000606715 XIRP2A4UGR9 3374 aa6.49□□□□□ -1.37
SHANK2-219ENST00000606715 H1FX-AS1Q4G0G2 97 aa6.49□□□□□ -1.37
SHANK2-219ENST00000606715 Q5VV11 94 aa6.47□□□□□ -1.37
SHANK2-219ENST00000606715 CDH23Q9H251 3354 aa6.47□□□□□ -1.37
SHANK2-219ENST00000606715 RPL37P61927 97 aaKnown RBP6.47□□□□□ -1.37
SHANK2-219ENST00000606715 RPS29P62273 56 aaKnown RBP6.46□□□□□ -1.37
SHANK2-219ENST00000606715 Q5XG85 94 aa6.46□□□□□ -1.38
SHANK2-219ENST00000606715 ROMO1P60602 79 aa6.46□□□□□ -1.38
SHANK2-219ENST00000606715 FLNCQ14315 2725 aa6.45□□□□□ -1.38
SHANK2-219ENST00000606715 MAP1AP78559 2803 aaPredicted RBP6.45□□□□□ -1.38
SHANK2-219ENST00000606715 PANO1I0J062 215 aa6.44□□□□□ -1.38
SHANK2-219ENST00000606715 ITPR1Q14643 2758 aa6.42□□□□□ -1.38
SHANK2-219ENST00000606715 A0A087X002 238 aa6.41□□□□□ -1.38
SHANK2-219ENST00000606715 TRIOO75962 3097 aa6.41□□□□□ -1.38
SHANK2-219ENST00000606715 ASB16-AS1Q495Z4 193 aa6.41□□□□□ -1.38
SHANK2-219ENST00000606715 CYSTM1Q9H1C7 97 aa6.4□□□□□ -1.39
SHANK2-219ENST00000606715 HIVEP1P15822 2718 aa6.39□□□□□ -1.39
SHANK2-219ENST00000606715 C20orf166-AS1Q96NR2 134 aa6.37□□□□□ -1.39
SHANK2-219ENST00000606715 VPS13AQ96RL7 3174 aa6.35□□□□□ -1.39
SHANK2-219ENST00000606715 SPATA8Q6RVD6 105 aa6.34□□□□□ -1.4
SHANK2-219ENST00000606715 NBEAL2Q6ZNJ1 2754 aa6.34□□□□□ -1.4
SHANK2-219ENST00000606715 SZT2Q5T011 3432 aa6.33□□□□□ -1.4
SHANK2-219ENST00000606715 TNRC18O15417 2968 aaPredicted RBP6.31□□□□□ -1.4
SHANK2-219ENST00000606715 STAB2Q8WWQ8 2551 aa6.31□□□□□ -1.4
SHANK2-219ENST00000606715 A8MUU9 505 aa6.3□□□□□ -1.4
SHANK2-219ENST00000606715 KRTAP13-1Q8IUC0 172 aa6.28□□□□□ -1.4
SHANK2-219ENST00000606715 UTP20O75691 2785 aaKnown RBP6.28□□□□□ -1.4
SHANK2-219ENST00000606715 APCP25054 2843 aa6.28□□□□□ -1.4
SHANK2-219ENST00000606715 KRTAP16-1A8MUX0 517 aa6.27□□□□□ -1.41
SHANK2-219ENST00000606715 KRTAP29-1A8MX34 341 aaPredicted RBP6.27□□□□□ -1.41
SHANK2-219ENST00000606715 FRYQ5TBA9 3013 aa6.26□□□□□ -1.41
SHANK2-219ENST00000606715 ATMQ13315 3056 aa6.26□□□□□ -1.41
SHANK2-219ENST00000606715 KRTAP7-1Q8IUC3 87 aa6.25□□□□□ -1.41
SHANK2-219ENST00000606715 KRTAP11-1Q8IUC1 163 aa6.25□□□□□ -1.41
SHANK2-219ENST00000606715 CELSR3Q9NYQ7 3312 aa6.24□□□□□ -1.41
SHANK2-219ENST00000606715 TENM4Q6N022 2769 aa6.24□□□□□ -1.41
SHANK2-219ENST00000606715 COL12A1Q99715 3063 aa6.24□□□□□ -1.41
SHANK2-219ENST00000606715 FRYLO94915 3013 aa6.23□□□□□ -1.41
SHANK2-219ENST00000606715 NIPBLQ6KC79 2804 aaeCLIP6.22□□□□□ -1.41
SHANK2-219ENST00000606715 DMBT1Q9UGM3 2413 aaPredicted RBP6.22□□□□□ -1.41
SHANK2-219ENST00000606715 KRTAP13-2Q52LG2 175 aa6.2□□□□□ -1.42
SHANK2-219ENST00000606715 VCANP13611 3396 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms