RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 LST1O00453 97 aa4.54□□□□□ -1.68
MSH6-211ENST00000606499 TCL1BO95988 128 aa4.54□□□□□ -1.68
MSH6-211ENST00000606499 OXTP01178 125 aa4.54□□□□□ -1.68
MSH6-211ENST00000606499 MT1HL1P0DM35 61 aa4.54□□□□□ -1.68
MSH6-211ENST00000606499 CRYGAP11844 174 aa4.54□□□□□ -1.68
MSH6-211ENST00000606499 SPRR1BP22528 89 aa4.54□□□□□ -1.68
MSH6-211ENST00000606499 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.54□□□□□ -1.68
MSH6-211ENST00000606499 Q8N377 158 aa4.54□□□□□ -1.68
MSH6-211ENST00000606499 IGLV9-49A0A0B4J1Y8 123 aa4.53□□□□□ -1.68
MSH6-211ENST00000606499 TEX49A0A1B0GTD5 131 aa4.53□□□□□ -1.68
MSH6-211ENST00000606499 SNCGO76070 127 aa4.53□□□□□ -1.68
MSH6-211ENST00000606499 DNAL4O96015 105 aa4.53□□□□□ -1.68
MSH6-211ENST00000606499 LYRM7Q5U5X0 104 aa4.53□□□□□ -1.68
MSH6-211ENST00000606499 TRACP01848 142 aa4.52□□□□□ -1.69
MSH6-211ENST00000606499 FABP2P12104 132 aa4.52□□□□□ -1.69
MSH6-211ENST00000606499 KRTAP10-8P60410 259 aa4.52□□□□□ -1.69
MSH6-211ENST00000606499 MOBPQ13875 183 aa4.52□□□□□ -1.69
MSH6-211ENST00000606499 SMIM29Q86T20 159 aa4.52□□□□□ -1.69
MSH6-211ENST00000606499 HERC1Q15751 4861 aa4.51□□□□□ -1.69
MSH6-211ENST00000606499 DMBT1Q9UGM3 2413 aaPredicted RBP4.51□□□□□ -1.69
MSH6-211ENST00000606499 ATXN8Q156A1 80 aa4.51□□□□□ -1.69
MSH6-211ENST00000606499 C9orf153Q5TBE3 101 aa4.51□□□□□ -1.69
MSH6-211ENST00000606499 TYMSOSQ8TAI1 123 aa4.51□□□□□ -1.69
MSH6-211ENST00000606499 TRBV20-1A0A075B6N2 111 aa4.5□□□□□ -1.69
MSH6-211ENST00000606499 OCIAD2Q56VL3 154 aa4.5□□□□□ -1.69
MSH6-211ENST00000606499 PPDPFLQ8WWR9 84 aa4.5□□□□□ -1.69
MSH6-211ENST00000606499 ORMDL1Q9P0S3 153 aa4.5□□□□□ -1.69
MSH6-211ENST00000606499 LAMTOR3Q9UHA4 124 aa4.5□□□□□ -1.69
MSH6-211ENST00000606499 H3BMG7 143 aa4.49□□□□□ -1.69
MSH6-211ENST00000606499 Q8NBF4 154 aa4.49□□□□□ -1.69
MSH6-211ENST00000606499 SPCS1Q9Y6A9 102 aa4.49□□□□□ -1.69
MSH6-211ENST00000606499 A0A0G2JQZ4 141 aa4.48□□□□□ -1.69
MSH6-211ENST00000606499 A0A1B0GV72 72 aa4.48□□□□□ -1.69
MSH6-211ENST00000606499 C9JAW5 83 aa4.48□□□□□ -1.69
MSH6-211ENST00000606499 F8WEM9 126 aa4.48□□□□□ -1.69
MSH6-211ENST00000606499 MTURNQ8N3F0 131 aa4.48□□□□□ -1.69
MSH6-211ENST00000606499 NDUFV3P56181 108 aaKnown RBP4.47□□□□□ -1.69
MSH6-211ENST00000606499 K7EP34 96 aa4.46□□□□□ -1.7
MSH6-211ENST00000606499 TMEM256-PLSCR3K7ERE1 68 aa4.46□□□□□ -1.7
MSH6-211ENST00000606499 BAALC-AS2P0C853 105 aa4.46□□□□□ -1.7
MSH6-211ENST00000606499 LINC00304Q8N9R0 145 aa4.46□□□□□ -1.7
MSH6-211ENST00000606499 IGLV8-61A0A075B6I0 122 aa4.45□□□□□ -1.7
MSH6-211ENST00000606499 H3BQ85 93 aa4.45□□□□□ -1.7
MSH6-211ENST00000606499 UBE2V1Q13404 147 aa4.45□□□□□ -1.7
MSH6-211ENST00000606499 SSBP3-AS1Q7Z2R9 100 aa4.45□□□□□ -1.7
MSH6-211ENST00000606499 ANKRD29Q8N6D5 301 aa4.45□□□□□ -1.7
MSH6-211ENST00000606499 IGFL1Q6UW32 110 aa4.44□□□□□ -1.7
MSH6-211ENST00000606499 HRCT1Q6UXD1 115 aa4.44□□□□□ -1.7
MSH6-211ENST00000606499 H3BT86 120 aa4.43□□□□□ -1.7
MSH6-211ENST00000606499 A0A1B0GV90 55 aa4.42□□□□□ -1.7
MSH6-211ENST00000606499 Q6JHZ5 121 aa4.42□□□□□ -1.7
MSH6-211ENST00000606499 GTF2H5Q6ZYL4 71 aa4.42□□□□□ -1.7
MSH6-211ENST00000606499 PRO0461Q9UI25 63 aa4.42□□□□□ -1.7
MSH6-211ENST00000606499 SPAG11AQ6PDA7 123 aa4.41□□□□□ -1.7
MSH6-211ENST00000606499 HMCN2Q8NDA2 5059 aa4.4□□□□□ -1.7
MSH6-211ENST00000606499 SPINK1P00995 79 aa4.4□□□□□ -1.71
MSH6-211ENST00000606499 TRBV7-4A0A0J9YYF1 115 aa4.39□□□□□ -1.71
MSH6-211ENST00000606499 A0A1W2PNM2 257 aa4.39□□□□□ -1.71
MSH6-211ENST00000606499 RBM3P98179 157 aaKnown RBP4.39□□□□□ -1.71
MSH6-211ENST00000606499 CD164Q04900 197 aa4.39□□□□□ -1.71
MSH6-211ENST00000606499 OBSCN-AS1Q96MR7 158 aa4.39□□□□□ -1.71
MSH6-211ENST00000606499 RETNLBQ9BQ08 111 aa4.39□□□□□ -1.71
MSH6-211ENST00000606499 C14orf132Q9NPU4 83 aa4.39□□□□□ -1.71
MSH6-211ENST00000606499 JMJD7-PLA2G4BH0Y9G9 81 aa4.38□□□□□ -1.71
MSH6-211ENST00000606499 CCKP06307 115 aa4.38□□□□□ -1.71
MSH6-211ENST00000606499 DSCR8Q96T75 97 aa4.38□□□□□ -1.71
MSH6-211ENST00000606499 VPS25Q9BRG1 176 aa4.38□□□□□ -1.71
MSH6-211ENST00000606499 TRBV7-7A0A0K0K1E9 115 aa4.37□□□□□ -1.71
MSH6-211ENST00000606499 RPS29P62273 56 aaKnown RBP4.37□□□□□ -1.71
MSH6-211ENST00000606499 TEN1Q86WV5 123 aa4.37□□□□□ -1.71
MSH6-211ENST00000606499 LIMD2Q9BT23 127 aa4.37□□□□□ -1.71
MSH6-211ENST00000606499 LOC110117498A0A087WWA1 95 aa4.36□□□□□ -1.71
MSH6-211ENST00000606499 F8W1H4 67 aa4.36□□□□□ -1.71
MSH6-211ENST00000606499 Q6Q795 121 aa4.36□□□□□ -1.71
MSH6-211ENST00000606499 Q6ZQT0 140 aa4.36□□□□□ -1.71
MSH6-211ENST00000606499 A0A087WSZ3 146 aa4.35□□□□□ -1.71
MSH6-211ENST00000606499 SVIPQ8NHG7 77 aa4.35□□□□□ -1.71
MSH6-211ENST00000606499 PRR4Q16378 134 aa4.34□□□□□ -1.71
MSH6-211ENST00000606499 ETDBQ3ZM63 59 aa4.34□□□□□ -1.71
MSH6-211ENST00000606499 Q5XG85 94 aa4.34□□□□□ -1.71
MSH6-211ENST00000606499 PDE6GP18545 87 aa4.33□□□□□ -1.72
MSH6-211ENST00000606499 LPAP08519 4548 aa4.33□□□□□ -1.72
MSH6-211ENST00000606499 ASB16-AS1Q495Z4 193 aa4.32□□□□□ -1.72
MSH6-211ENST00000606499 C1orf195Q5TG92 126 aa4.32□□□□□ -1.72
MSH6-211ENST00000606499 SS18L2Q9UHA2 77 aa4.32□□□□□ -1.72
MSH6-211ENST00000606499 Q96NJ1 140 aa4.3□□□□□ -1.72
MSH6-211ENST00000606499 IGLV7-46A0A075B6I9 117 aa4.29□□□□□ -1.72
MSH6-211ENST00000606499 FP248Q71RG6 208 aaPredicted RBP4.29□□□□□ -1.72
MSH6-211ENST00000606499 LRP2P98164 4655 aa4.29□□□□□ -1.72
MSH6-211ENST00000606499 A0A1B0GW54 56 aa4.28□□□□□ -1.72
MSH6-211ENST00000606499 H3BS24 57 aa4.28□□□□□ -1.72
MSH6-211ENST00000606499 C21orf62-AS1Q17RA5 79 aa4.28□□□□□ -1.72
MSH6-211ENST00000606499 DEFB116Q30KQ4 102 aa4.28□□□□□ -1.72
MSH6-211ENST00000606499 SIGMAR1Q99720 223 aa4.27□□□□□ -1.73
MSH6-211ENST00000606499 LINC00472Q9H8W2 130 aa4.27□□□□□ -1.73
MSH6-211ENST00000606499 UBR4Q5T4S7 5183 aa4.26□□□□□ -1.73
MSH6-211ENST00000606499 C9orf92A6NGG3 77 aa4.25□□□□□ -1.73
MSH6-211ENST00000606499 IGKV4-1P06312 121 aa4.25□□□□□ -1.73
MSH6-211ENST00000606499 NREPQ16612 68 aa4.25□□□□□ -1.73
MSH6-211ENST00000606499 TPRXLQ17RH7 258 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms