RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 IGIPA6NJ69 53 aa0.94□□□□□ -2.26
SGMS1-207ENST00000602619 H3BUA1 57 aa0.94□□□□□ -2.26
SGMS1-207ENST00000602619 NDUFA4O00483 81 aa0.94□□□□□ -2.26
SGMS1-207ENST00000602619 USMG5Q96IX5 58 aa0.94□□□□□ -2.26
SGMS1-207ENST00000602619 TIMM8BQ9Y5J9 83 aaPredicted RBP0.94□□□□□ -2.26
SGMS1-207ENST00000602619 CEP290O15078 2479 aa0.94□□□□□ -2.26
SGMS1-207ENST00000602619 MAP1BP46821 2468 aaKnown RBP0.94□□□□□ -2.26
SGMS1-207ENST00000602619 BOD1L1Q8NFC6 3051 aa0.94□□□□□ -2.26
SGMS1-207ENST00000602619 TNCP24821 2201 aa0.93□□□□□ -2.26
SGMS1-207ENST00000602619 MED13LQ71F56 2210 aa0.93□□□□□ -2.26
SGMS1-207ENST00000602619 TACC2O95359 2948 aa0.93□□□□□ -2.26
SGMS1-207ENST00000602619 COL6A3P12111 3177 aa0.93□□□□□ -2.26
SGMS1-207ENST00000602619 NBPF19A0A087WUL8 3843 aa0.93□□□□□ -2.26
SGMS1-207ENST00000602619 A0A1B0GU69 56 aa0.93□□□□□ -2.26
SGMS1-207ENST00000602619 H3BVH4 76 aa0.93□□□□□ -2.26
SGMS1-207ENST00000602619 NDUFB1O75438 58 aa0.93□□□□□ -2.26
SGMS1-207ENST00000602619 DEFB109BQ30KR1 87 aa0.93□□□□□ -2.26
SGMS1-207ENST00000602619 SSBP3-AS1Q7Z2R9 100 aa0.93□□□□□ -2.26
SGMS1-207ENST00000602619 ASH1LQ9NR48 2969 aaKnown RBP0.93□□□□□ -2.26
SGMS1-207ENST00000602619 PLAC8Q9NZF1 115 aa0.93□□□□□ -2.26
SGMS1-207ENST00000602619 LAMA5O15230 3695 aa0.93□□□□□ -2.26
SGMS1-207ENST00000602619 LOC400499M0QZD8 3231 aa0.93□□□□□ -2.26
SGMS1-207ENST00000602619 KNTC1P50748 2209 aa0.93□□□□□ -2.26
SGMS1-207ENST00000602619 MUC3AQ02505 3323 aa0.93□□□□□ -2.26
SGMS1-207ENST00000602619 RP1L1Q8IWN7 2480 aaPredicted RBP0.93□□□□□ -2.26
SGMS1-207ENST00000602619 DMXL1Q9Y485 3027 aa0.93□□□□□ -2.26
SGMS1-207ENST00000602619 ZFHX4Q86UP3 3567 aa0.92□□□□□ -2.26
SGMS1-207ENST00000602619 A8MTW9 85 aa0.92□□□□□ -2.26
SGMS1-207ENST00000602619 I3L3M4 83 aa0.92□□□□□ -2.26
SGMS1-207ENST00000602619 M0QY20 66 aa0.92□□□□□ -2.26
SGMS1-207ENST00000602619 NDUFA1O15239 70 aa0.92□□□□□ -2.26
SGMS1-207ENST00000602619 APELAP0DMC3 54 aa0.92□□□□□ -2.26
SGMS1-207ENST00000602619 SPINK7P58062 85 aa0.92□□□□□ -2.26
SGMS1-207ENST00000602619 RPL39LQ96EH5 51 aaKnown RBP0.92□□□□□ -2.26
SGMS1-207ENST00000602619 ANKHD1Q8IWZ3 2542 aaKnown RBP0.92□□□□□ -2.26
SGMS1-207ENST00000602619 MGAQ8IWI9 3026 aa0.92□□□□□ -2.26
SGMS1-207ENST00000602619 ZDBF2Q9HCK1 2354 aa0.92□□□□□ -2.26
SGMS1-207ENST00000602619 TENM1Q9UKZ4 2725 aa0.92□□□□□ -2.26
SGMS1-207ENST00000602619 ATMQ13315 3056 aa0.92□□□□□ -2.26
SGMS1-207ENST00000602619 PLCE1Q9P212 2302 aa0.92□□□□□ -2.26
SGMS1-207ENST00000602619 CREBBPQ92793 2442 aa0.91□□□□□ -2.26
SGMS1-207ENST00000602619 PIEZO2Q9H5I5 2752 aa0.91□□□□□ -2.26
SGMS1-207ENST00000602619 ASPMQ8IZT6 3477 aa0.91□□□□□ -2.26
SGMS1-207ENST00000602619 WNK2Q9Y3S1 2297 aa0.91□□□□□ -2.26
SGMS1-207ENST00000602619 BDP1A6H8Y1 2624 aa0.91□□□□□ -2.26
SGMS1-207ENST00000602619 HELZ2Q9BYK8 2649 aaKnown RBP0.91□□□□□ -2.26
SGMS1-207ENST00000602619 CACNA1HO95180 2353 aa0.91□□□□□ -2.26
SGMS1-207ENST00000602619 DNAJC13O75165 2243 aa0.91□□□□□ -2.26
SGMS1-207ENST00000602619 CADP27708 2225 aa0.91□□□□□ -2.26
SGMS1-207ENST00000602619 TRBV7-4A0A0J9YYF1 115 aa0.91□□□□□ -2.26
SGMS1-207ENST00000602619 H0YGX0 51 aa0.91□□□□□ -2.26
SGMS1-207ENST00000602619 RPL39P62891 51 aaKnown RBP0.91□□□□□ -2.26
SGMS1-207ENST00000602619 RHPN1-AS1Q9BWJ2 59 aa0.91□□□□□ -2.26
SGMS1-207ENST00000602619 SPTA1P02549 2419 aa0.91□□□□□ -2.26
SGMS1-207ENST00000602619 COL12A1Q99715 3063 aa0.91□□□□□ -2.26
SGMS1-207ENST00000602619 URB1O60287 2271 aaKnown RBP0.91□□□□□ -2.26
SGMS1-207ENST00000602619 TPRP12270 2363 aaKnown RBP0.91□□□□□ -2.26
SGMS1-207ENST00000602619 NAV3Q8IVL0 2385 aa0.91□□□□□ -2.26
SGMS1-207ENST00000602619 ANKRD11Q6UB99 2663 aaPredicted RBP0.91□□□□□ -2.26
SGMS1-207ENST00000602619 NCOR1O75376 2440 aa0.9□□□□□ -2.26
SGMS1-207ENST00000602619 DCHS1Q96JQ0 3298 aa0.9□□□□□ -2.26
SGMS1-207ENST00000602619 ZNF292O60281 2723 aa0.9□□□□□ -2.26
SGMS1-207ENST00000602619 LYNX1G3V0Z9 82 aa0.9□□□□□ -2.27
SGMS1-207ENST00000602619 DEFB112Q30KQ8 113 aa0.9□□□□□ -2.27
SGMS1-207ENST00000602619 DEFB124Q8NES8 71 aa0.9□□□□□ -2.27
SGMS1-207ENST00000602619 LINC00308Q8TCZ7 52 aa0.9□□□□□ -2.27
SGMS1-207ENST00000602619 C10orf95Q9H7T3 257 aa0.9□□□□□ -2.27
SGMS1-207ENST00000602619 ROS1P08922 2347 aa0.9□□□□□ -2.27
SGMS1-207ENST00000602619 TLN1Q9Y490 2541 aaKnown RBP0.9□□□□□ -2.27
SGMS1-207ENST00000602619 CEP295Q9C0D2 2601 aa0.9□□□□□ -2.27
SGMS1-207ENST00000602619 VPS13CQ709C8 3753 aa0.9□□□□□ -2.27
SGMS1-207ENST00000602619 ANK3Q12955 4377 aaKnown RBP0.9□□□□□ -2.27
SGMS1-207ENST00000602619 TTC28Q96AY4 2481 aa0.9□□□□□ -2.27
SGMS1-207ENST00000602619 DCHS2Q6V1P9 2916 aa0.89□□□□□ -2.27
SGMS1-207ENST00000602619 SVEP1Q4LDE5 3571 aa0.89□□□□□ -2.27
SGMS1-207ENST00000602619 LRBAP50851 2863 aa0.89□□□□□ -2.27
SGMS1-207ENST00000602619 COX6A2Q02221 97 aa0.89□□□□□ -2.27
SGMS1-207ENST00000602619 PRB3Q04118 309 aaPredicted RBP0.89□□□□□ -2.27
SGMS1-207ENST00000602619 DEFB123Q8N688 67 aa0.89□□□□□ -2.27
SGMS1-207ENST00000602619 CDKN2A-AS1Q9UH64 79 aa0.89□□□□□ -2.27
SGMS1-207ENST00000602619 AKAP13Q12802 2813 aa0.89□□□□□ -2.27
SGMS1-207ENST00000602619 EP300Q09472 2414 aaPredicted RBP0.89□□□□□ -2.27
SGMS1-207ENST00000602619 GVINP1Q7Z2Y8 2422 aa0.89□□□□□ -2.27
SGMS1-207ENST00000602619 CEP250Q9BV73 2442 aa0.89□□□□□ -2.27
SGMS1-207ENST00000602619 PKDREJQ9NTG1 2253 aa0.89□□□□□ -2.27
SGMS1-207ENST00000602619 CELSR1Q9NYQ6 3014 aa0.89□□□□□ -2.27
SGMS1-207ENST00000602619 JMJD1CQ15652 2540 aa0.88□□□□□ -2.27
SGMS1-207ENST00000602619 DNAH1Q9P2D7 4330 aa0.88□□□□□ -2.27
SGMS1-207ENST00000602619 SPTBN1Q01082 2364 aaKnown RBP0.88□□□□□ -2.27
SGMS1-207ENST00000602619 DEFB1P60022 68 aa0.88□□□□□ -2.27
SGMS1-207ENST00000602619 Q8IZM0 81 aa0.88□□□□□ -2.27
SGMS1-207ENST00000602619 UBL5Q9BZL1 73 aa0.88□□□□□ -2.27
SGMS1-207ENST00000602619 TP53AIP1Q9HCN2 124 aa0.88□□□□□ -2.27
SGMS1-207ENST00000602619 PTPRZ1P23471 2315 aaPredicted RBP0.88□□□□□ -2.27
SGMS1-207ENST00000602619 CELSR2Q9HCU4 2923 aa0.88□□□□□ -2.27
SGMS1-207ENST00000602619 CNOT1A5YKK6 2376 aaKnown RBP0.88□□□□□ -2.27
SGMS1-207ENST00000602619 KMT2BQ9UMN6 2715 aaPredicted RBP0.87□□□□□ -2.27
SGMS1-207ENST00000602619 DNAH3Q8TD57 4116 aa0.87□□□□□ -2.27
SGMS1-207ENST00000602619 CSMD1Q96PZ7 3565 aa0.87□□□□□ -2.27
SGMS1-207ENST00000602619 APC2O95996 2303 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms