RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 DEFB105AQ8NG35 78 aa7.46□□□□□ -1.22
CHMP2A-206ENST00000600118 TRACP01848 142 aa7.45□□□□□ -1.22
CHMP2A-206ENST00000600118 A0A1W2PPM0 123 aa7.44□□□□□ -1.22
CHMP2A-206ENST00000600118 TCL1BO95988 128 aa7.44□□□□□ -1.22
CHMP2A-206ENST00000600118 OCIAD2Q56VL3 154 aa7.44□□□□□ -1.22
CHMP2A-206ENST00000600118 LYRM7Q5U5X0 104 aa7.44□□□□□ -1.22
CHMP2A-206ENST00000600118 C3orf22Q8N5N4 141 aa7.44□□□□□ -1.22
CHMP2A-206ENST00000600118 PPDPFLQ8WWR9 84 aa7.44□□□□□ -1.22
CHMP2A-206ENST00000600118 ATXN8Q156A1 80 aa7.42□□□□□ -1.22
CHMP2A-206ENST00000600118 LAMTOR3Q9UHA4 124 aa7.42□□□□□ -1.22
CHMP2A-206ENST00000600118 TRBV20-1A0A075B6N2 111 aa7.41□□□□□ -1.22
CHMP2A-206ENST00000600118 DNAL4O96015 105 aa7.41□□□□□ -1.22
CHMP2A-206ENST00000600118 TYMSOSQ8TAI1 123 aa7.41□□□□□ -1.22
CHMP2A-206ENST00000600118 IGLV9-49A0A0B4J1Y8 123 aa7.4□□□□□ -1.22
CHMP2A-206ENST00000600118 GHRHP01286 108 aa7.4□□□□□ -1.22
CHMP2A-206ENST00000600118 FABP2P12104 132 aa7.4□□□□□ -1.22
CHMP2A-206ENST00000600118 ORMDL1Q9P0S3 153 aa7.4□□□□□ -1.22
CHMP2A-206ENST00000600118 J3QL48 77 aa7.39□□□□□ -1.23
CHMP2A-206ENST00000600118 MOBPQ13875 183 aa7.39□□□□□ -1.23
CHMP2A-206ENST00000600118 SSBP3-AS1Q7Z2R9 100 aa7.39□□□□□ -1.23
CHMP2A-206ENST00000600118 H3BQ85 93 aa7.38□□□□□ -1.23
CHMP2A-206ENST00000600118 Q8NBF4 154 aa7.38□□□□□ -1.23
CHMP2A-206ENST00000600118 DMBT1Q9UGM3 2413 aaPredicted RBP7.37□□□□□ -1.23
CHMP2A-206ENST00000600118 IGLV8-61A0A075B6I0 122 aa7.36□□□□□ -1.23
CHMP2A-206ENST00000600118 NDUFV3P56181 108 aaKnown RBP7.36□□□□□ -1.23
CHMP2A-206ENST00000600118 LCE2AQ5TA79 106 aaPredicted RBP7.36□□□□□ -1.23
CHMP2A-206ENST00000600118 C9orf153Q5TBE3 101 aa7.36□□□□□ -1.23
CHMP2A-206ENST00000600118 SPCS1Q9Y6A9 102 aa7.36□□□□□ -1.23
CHMP2A-206ENST00000600118 TMEM256-PLSCR3K7ERE1 68 aa7.35□□□□□ -1.23
CHMP2A-206ENST00000600118 F8WEM9 126 aa7.34□□□□□ -1.23
CHMP2A-206ENST00000600118 BAALC-AS2P0C853 105 aa7.34□□□□□ -1.23
CHMP2A-206ENST00000600118 UBE2V1Q13404 147 aa7.34□□□□□ -1.23
CHMP2A-206ENST00000600118 LINC00304Q8N9R0 145 aa7.34□□□□□ -1.23
CHMP2A-206ENST00000600118 H3BMG7 143 aa7.33□□□□□ -1.24
CHMP2A-206ENST00000600118 K7EP34 96 aa7.33□□□□□ -1.24
CHMP2A-206ENST00000600118 C9JAW5 83 aa7.32□□□□□ -1.24
CHMP2A-206ENST00000600118 SPAG11AQ6PDA7 123 aa7.32□□□□□ -1.24
CHMP2A-206ENST00000600118 Q6JHZ5 121 aa7.31□□□□□ -1.24
CHMP2A-206ENST00000600118 A0A0G2JQZ4 141 aa7.3□□□□□ -1.24
CHMP2A-206ENST00000600118 IGFL1Q6UW32 110 aa7.3□□□□□ -1.24
CHMP2A-206ENST00000600118 ANKRD29Q8N6D5 301 aa7.3□□□□□ -1.24
CHMP2A-206ENST00000600118 H3BT86 120 aa7.29□□□□□ -1.24
CHMP2A-206ENST00000600118 HERC1Q15751 4861 aa7.29□□□□□ -1.24
CHMP2A-206ENST00000600118 SPINK1P00995 79 aa7.28□□□□□ -1.24
CHMP2A-206ENST00000600118 CD164Q04900 197 aa7.28□□□□□ -1.24
CHMP2A-206ENST00000600118 PRO0461Q9UI25 63 aa7.28□□□□□ -1.24
CHMP2A-206ENST00000600118 C4orf48Q5BLP8 95 aa7.27□□□□□ -1.25
CHMP2A-206ENST00000600118 GTF2H5Q6ZYL4 71 aa7.27□□□□□ -1.25
CHMP2A-206ENST00000600118 MTURNQ8N3F0 131 aa7.27□□□□□ -1.25
CHMP2A-206ENST00000600118 RPS29P62273 56 aaKnown RBP7.26□□□□□ -1.25
CHMP2A-206ENST00000600118 SMCPP49901 116 aaPredicted RBP7.25□□□□□ -1.25
CHMP2A-206ENST00000600118 OBSCN-AS1Q96MR7 158 aa7.25□□□□□ -1.25
CHMP2A-206ENST00000600118 TRBV7-4A0A0J9YYF1 115 aa7.24□□□□□ -1.25
CHMP2A-206ENST00000600118 HRCT1Q6UXD1 115 aa7.24□□□□□ -1.25
CHMP2A-206ENST00000600118 A0A1B0GV72 72 aa7.23□□□□□ -1.25
CHMP2A-206ENST00000600118 JMJD7-PLA2G4BH0Y9G9 81 aa7.23□□□□□ -1.25
CHMP2A-206ENST00000600118 RBM3P98179 157 aaKnown RBP7.23□□□□□ -1.25
CHMP2A-206ENST00000600118 Q6Q795 121 aa7.23□□□□□ -1.25
CHMP2A-206ENST00000600118 A0A1W2PNM2 257 aa7.22□□□□□ -1.25
CHMP2A-206ENST00000600118 Q5XG85 94 aa7.22□□□□□ -1.25
CHMP2A-206ENST00000600118 TRBV7-7A0A0K0K1E9 115 aa7.21□□□□□ -1.26
CHMP2A-206ENST00000600118 A0A1B0GV90 55 aa7.2□□□□□ -1.26
CHMP2A-206ENST00000600118 TEN1Q86WV5 123 aa7.2□□□□□ -1.26
CHMP2A-206ENST00000600118 DSCR8Q96T75 97 aa7.2□□□□□ -1.26
CHMP2A-206ENST00000600118 LOC110117498A0A087WWA1 95 aa7.19□□□□□ -1.26
CHMP2A-206ENST00000600118 F8W1H4 67 aa7.19□□□□□ -1.26
CHMP2A-206ENST00000600118 LIMD2Q9BT23 127 aa7.19□□□□□ -1.26
CHMP2A-206ENST00000600118 HMCN2Q8NDA2 5059 aa7.19□□□□□ -1.26
CHMP2A-206ENST00000600118 LCE2CQ5TA81 110 aa7.17□□□□□ -1.26
CHMP2A-206ENST00000600118 Q6ZQT0 140 aa7.17□□□□□ -1.26
CHMP2A-206ENST00000600118 C14orf132Q9NPU4 83 aa7.17□□□□□ -1.26
CHMP2A-206ENST00000600118 CCKP06307 115 aa7.16□□□□□ -1.26
CHMP2A-206ENST00000600118 PDE6GP18545 87 aa7.16□□□□□ -1.26
CHMP2A-206ENST00000600118 ASB16-AS1Q495Z4 193 aa7.15□□□□□ -1.26
CHMP2A-206ENST00000600118 RETNLBQ9BQ08 111 aa7.15□□□□□ -1.26
CHMP2A-206ENST00000600118 A0A087WSZ3 146 aa7.14□□□□□ -1.27
CHMP2A-206ENST00000600118 C21orf62-AS1Q17RA5 79 aa7.12□□□□□ -1.27
CHMP2A-206ENST00000600118 C1orf195Q5TG92 126 aa7.12□□□□□ -1.27
CHMP2A-206ENST00000600118 FP248Q71RG6 208 aaPredicted RBP7.12□□□□□ -1.27
CHMP2A-206ENST00000600118 VPS25Q9BRG1 176 aa7.12□□□□□ -1.27
CHMP2A-206ENST00000600118 SS18L2Q9UHA2 77 aa7.12□□□□□ -1.27
CHMP2A-206ENST00000600118 A0A1B0GW54 56 aa7.11□□□□□ -1.27
CHMP2A-206ENST00000600118 PRR4Q16378 134 aa7.1□□□□□ -1.27
CHMP2A-206ENST00000600118 ETDBQ3ZM63 59 aa7.1□□□□□ -1.27
CHMP2A-206ENST00000600118 IGLV7-46A0A075B6I9 117 aa7.07□□□□□ -1.28
CHMP2A-206ENST00000600118 Q96NJ1 140 aa7.07□□□□□ -1.28
CHMP2A-206ENST00000600118 LINC00472Q9H8W2 130 aa7.05□□□□□ -1.28
CHMP2A-206ENST00000600118 TPRXLQ17RH7 258 aa7.03□□□□□ -1.28
CHMP2A-206ENST00000600118 KRTAP13-3Q3SY46 172 aa7.01□□□□□ -1.29
CHMP2A-206ENST00000600118 LORP23490 312 aaPredicted RBP7□□□□□ -1.29
CHMP2A-206ENST00000600118 LPAP08519 4548 aa7□□□□□ -1.29
CHMP2A-206ENST00000600118 NREPQ16612 68 aa6.98□□□□□ -1.29
CHMP2A-206ENST00000600118 DEFB116Q30KQ4 102 aa6.98□□□□□ -1.29
CHMP2A-206ENST00000600118 LRP2P98164 4655 aa6.98□□□□□ -1.29
CHMP2A-206ENST00000600118 IGKV4-1P06312 121 aa6.97□□□□□ -1.29
CHMP2A-206ENST00000600118 LINC00846Q9NV44 126 aa6.97□□□□□ -1.29
CHMP2A-206ENST00000600118 J3KT08 172 aa6.96□□□□□ -1.3
CHMP2A-206ENST00000600118 Q6ZVQ6 151 aa6.95□□□□□ -1.3
CHMP2A-206ENST00000600118 SIGMAR1Q99720 223 aa6.95□□□□□ -1.3
CHMP2A-206ENST00000600118 FAM240AA0A1B0GVK7 77 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms