RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 SMIM29Q86T20 159 aa12.92□□□□□ -0.34
CHMP2A-204ENST00000597848 LINC00304Q8N9R0 145 aa12.92□□□□□ -0.34
CHMP2A-204ENST00000597848 Q8NBF4 154 aa12.92□□□□□ -0.34
CHMP2A-204ENST00000597848 DNAL4O96015 105 aa12.91□□□□□ -0.34
CHMP2A-204ENST00000597848 OCIAD2Q56VL3 154 aa12.91□□□□□ -0.34
CHMP2A-204ENST00000597848 TNXBP22105 4242 aa12.9□□□□□ -0.34
CHMP2A-204ENST00000597848 PPDPFLQ8WWR9 84 aa12.89□□□□□ -0.35
CHMP2A-204ENST00000597848 H3BUT2 72 aa12.88□□□□□ -0.35
CHMP2A-204ENST00000597848 C4orf48Q5BLP8 95 aa12.88□□□□□ -0.35
CHMP2A-204ENST00000597848 F8WEM9 126 aa12.87□□□□□ -0.35
CHMP2A-204ENST00000597848 TAX1BP3O14907 124 aa12.87□□□□□ -0.35
CHMP2A-204ENST00000597848 GHRHP01286 108 aa12.87□□□□□ -0.35
CHMP2A-204ENST00000597848 C9orf118A6NHY6 69 aa12.86□□□□□ -0.35
CHMP2A-204ENST00000597848 LST1O00453 97 aa12.86□□□□□ -0.35
CHMP2A-204ENST00000597848 TRACP01848 142 aa12.85□□□□□ -0.35
CHMP2A-204ENST00000597848 FABP2P12104 132 aa12.84□□□□□ -0.35
CHMP2A-204ENST00000597848 LYRM7Q5U5X0 104 aa12.84□□□□□ -0.35
CHMP2A-204ENST00000597848 ORMDL1Q9P0S3 153 aa12.84□□□□□ -0.35
CHMP2A-204ENST00000597848 COL5A1-AS1Q5SY13 56 aa12.83□□□□□ -0.36
CHMP2A-204ENST00000597848 SPAG11AQ6PDA7 123 aa12.83□□□□□ -0.36
CHMP2A-204ENST00000597848 TCL1BO95988 128 aa12.82□□□□□ -0.36
CHMP2A-204ENST00000597848 ATXN8Q156A1 80 aa12.82□□□□□ -0.36
CHMP2A-204ENST00000597848 H3BQ85 93 aa12.79□□□□□ -0.36
CHMP2A-204ENST00000597848 NDUFV3P56181 108 aaKnown RBP12.78□□□□□ -0.36
CHMP2A-204ENST00000597848 A0A1W2PPM0 123 aa12.77□□□□□ -0.37
CHMP2A-204ENST00000597848 TRBV20-1A0A075B6N2 111 aa12.76□□□□□ -0.37
CHMP2A-204ENST00000597848 TMEM256-PLSCR3K7ERE1 68 aa12.76□□□□□ -0.37
CHMP2A-204ENST00000597848 SPINK1P00995 79 aa12.76□□□□□ -0.37
CHMP2A-204ENST00000597848 HRCT1Q6UXD1 115 aa12.76□□□□□ -0.37
CHMP2A-204ENST00000597848 A0A0G2JQZ4 141 aa12.75□□□□□ -0.37
CHMP2A-204ENST00000597848 HERC1Q15751 4861 aa12.73□□□□□ -0.37
CHMP2A-204ENST00000597848 IGLV8-61A0A075B6I0 122 aa12.73□□□□□ -0.37
CHMP2A-204ENST00000597848 Q6JHZ5 121 aa12.73□□□□□ -0.37
CHMP2A-204ENST00000597848 BAALC-AS2P0C853 105 aa12.72□□□□□ -0.37
CHMP2A-204ENST00000597848 H3BMG7 143 aa12.71□□□□□ -0.37
CHMP2A-204ENST00000597848 IGFL1Q6UW32 110 aa12.69□□□□□ -0.38
CHMP2A-204ENST00000597848 CD164Q04900 197 aa12.68□□□□□ -0.38
CHMP2A-204ENST00000597848 UBE2V1Q13404 147 aa12.68□□□□□ -0.38
CHMP2A-204ENST00000597848 A0A1B0GV72 72 aa12.67□□□□□ -0.38
CHMP2A-204ENST00000597848 RPS29P62273 56 aaKnown RBP12.66□□□□□ -0.38
CHMP2A-204ENST00000597848 SPCS1Q9Y6A9 102 aa12.66□□□□□ -0.38
CHMP2A-204ENST00000597848 C9JAW5 83 aa12.65□□□□□ -0.38
CHMP2A-204ENST00000597848 ANKRD29Q8N6D5 301 aa12.65□□□□□ -0.38
CHMP2A-204ENST00000597848 RETNLBQ9BQ08 111 aa12.65□□□□□ -0.38
CHMP2A-204ENST00000597848 PRR4Q16378 134 aa12.63□□□□□ -0.39
CHMP2A-204ENST00000597848 LIMD2Q9BT23 127 aa12.62□□□□□ -0.39
CHMP2A-204ENST00000597848 RBM3P98179 157 aaKnown RBP12.57□□□□□ -0.4
CHMP2A-204ENST00000597848 MTURNQ8N3F0 131 aa12.56□□□□□ -0.4
CHMP2A-204ENST00000597848 TRBV7-7A0A0K0K1E9 115 aa12.55□□□□□ -0.4
CHMP2A-204ENST00000597848 K7EP34 96 aa12.54□□□□□ -0.4
CHMP2A-204ENST00000597848 TEN1Q86WV5 123 aa12.54□□□□□ -0.4
CHMP2A-204ENST00000597848 DSCR8Q96T75 97 aa12.53□□□□□ -0.4
CHMP2A-204ENST00000597848 H3BT86 120 aa12.52□□□□□ -0.41
CHMP2A-204ENST00000597848 JMJD7-PLA2G4BH0Y9G9 81 aa12.51□□□□□ -0.41
CHMP2A-204ENST00000597848 Q5XG85 94 aa12.51□□□□□ -0.41
CHMP2A-204ENST00000597848 Q6Q795 121 aa12.51□□□□□ -0.41
CHMP2A-204ENST00000597848 A0A1W2PNM2 257 aa12.5□□□□□ -0.41
CHMP2A-204ENST00000597848 IGLV7-46A0A075B6I9 117 aa12.49□□□□□ -0.41
CHMP2A-204ENST00000597848 GTF2H5Q6ZYL4 71 aa12.49□□□□□ -0.41
CHMP2A-204ENST00000597848 TRBV7-4A0A0J9YYF1 115 aa12.48□□□□□ -0.41
CHMP2A-204ENST00000597848 CCKP06307 115 aa12.48□□□□□ -0.41
CHMP2A-204ENST00000597848 FP248Q71RG6 208 aaPredicted RBP12.48□□□□□ -0.41
CHMP2A-204ENST00000597848 VPS25Q9BRG1 176 aa12.46□□□□□ -0.41
CHMP2A-204ENST00000597848 HMCN2Q8NDA2 5059 aa12.46□□□□□ -0.42
CHMP2A-204ENST00000597848 A0A087WSZ3 146 aa12.44□□□□□ -0.42
CHMP2A-204ENST00000597848 C1orf195Q5TG92 126 aa12.43□□□□□ -0.42
CHMP2A-204ENST00000597848 SS18L2Q9UHA2 77 aa12.43□□□□□ -0.42
CHMP2A-204ENST00000597848 C14orf132Q9NPU4 83 aa12.42□□□□□ -0.42
CHMP2A-204ENST00000597848 OBSCN-AS1Q96MR7 158 aa12.41□□□□□ -0.42
CHMP2A-204ENST00000597848 SMCPP49901 116 aaPredicted RBP12.4□□□□□ -0.42
CHMP2A-204ENST00000597848 ASB16-AS1Q495Z4 193 aa12.4□□□□□ -0.42
CHMP2A-204ENST00000597848 PRO0461Q9UI25 63 aa12.4□□□□□ -0.42
CHMP2A-204ENST00000597848 LOC110117498A0A087WWA1 95 aa12.39□□□□□ -0.43
CHMP2A-204ENST00000597848 PDE6GP18545 87 aa12.39□□□□□ -0.43
CHMP2A-204ENST00000597848 Q6ZQT0 140 aa12.38□□□□□ -0.43
CHMP2A-204ENST00000597848 TPRXLQ17RH7 258 aa12.33□□□□□ -0.44
CHMP2A-204ENST00000597848 F8W1H4 67 aa12.32□□□□□ -0.44
CHMP2A-204ENST00000597848 CDIP1Q9H305 208 aa12.3□□□□□ -0.44
CHMP2A-204ENST00000597848 C21orf62-AS1Q17RA5 79 aa12.29□□□□□ -0.44
CHMP2A-204ENST00000597848 KRTAP13-3Q3SY46 172 aa12.29□□□□□ -0.44
CHMP2A-204ENST00000597848 A0A1B0GV90 55 aa12.27□□□□□ -0.45
CHMP2A-204ENST00000597848 A0A1B0GW54 56 aa12.25□□□□□ -0.45
CHMP2A-204ENST00000597848 Q96NJ1 140 aa12.24□□□□□ -0.45
CHMP2A-204ENST00000597848 C9orf92A6NGG3 77 aa12.22□□□□□ -0.45
CHMP2A-204ENST00000597848 DEFB116Q30KQ4 102 aa12.21□□□□□ -0.45
CHMP2A-204ENST00000597848 ETDBQ3ZM63 59 aa12.21□□□□□ -0.45
CHMP2A-204ENST00000597848 IGKV4-1P06312 121 aa12.2□□□□□ -0.46
CHMP2A-204ENST00000597848 SIGMAR1Q99720 223 aa12.2□□□□□ -0.46
CHMP2A-204ENST00000597848 LINC00472Q9H8W2 130 aa12.2□□□□□ -0.46
CHMP2A-204ENST00000597848 LPAP08519 4548 aa12.19□□□□□ -0.46
CHMP2A-204ENST00000597848 LRP2P98164 4655 aa12.18□□□□□ -0.46
CHMP2A-204ENST00000597848 NREPQ16612 68 aa12.14□□□□□ -0.47
CHMP2A-204ENST00000597848 XP32Q5T750 250 aa12.11□□□□□ -0.47
CHMP2A-204ENST00000597848 J3KT08 172 aa12.1□□□□□ -0.47
CHMP2A-204ENST00000597848 UBR4Q5T4S7 5183 aa12.03□□□□□ -0.48
CHMP2A-204ENST00000597848 IGHV6-1A0A0B4J1U7 121 aa12.03□□□□□ -0.48
CHMP2A-204ENST00000597848 DSCR10P59022 87 aa12.03□□□□□ -0.48
CHMP2A-204ENST00000597848 NDUFB1O75438 58 aa12.01□□□□□ -0.49
CHMP2A-204ENST00000597848 Q6ZVQ6 151 aa12.01□□□□□ -0.49
CHMP2A-204ENST00000597848 LINC00846Q9NV44 126 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms