RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 K7EP34 96 aa8.93□□□□□ -0.98
TRIM28-207ENST00000597136 LINC01547P58512 204 aaPredicted RBP8.93□□□□□ -0.98
TRIM28-207ENST00000597136 DEFB105AQ8NG35 78 aa8.93□□□□□ -0.98
TRIM28-207ENST00000597136 OCIAD2Q56VL3 154 aa8.92□□□□□ -0.98
TRIM28-207ENST00000597136 GAGE2AQ6NT46 116 aa8.92□□□□□ -0.98
TRIM28-207ENST00000597136 TEX49A0A1B0GTD5 131 aa8.9□□□□□ -0.98
TRIM28-207ENST00000597136 LINC00483Q53H64 154 aa8.9□□□□□ -0.98
TRIM28-207ENST00000597136 GTF2H5Q6ZYL4 71 aa8.9□□□□□ -0.98
TRIM28-207ENST00000597136 Q8N377 158 aa8.9□□□□□ -0.98
TRIM28-207ENST00000597136 ORMDL1Q9P0S3 153 aa8.9□□□□□ -0.98
TRIM28-207ENST00000597136 SPRR1BP22528 89 aa8.9□□□□□ -0.99
TRIM28-207ENST00000597136 C9JAW5 83 aa8.89□□□□□ -0.99
TRIM28-207ENST00000597136 A0A087X002 238 aa8.88□□□□□ -0.99
TRIM28-207ENST00000597136 PPDPFLQ8WWR9 84 aa8.88□□□□□ -0.99
TRIM28-207ENST00000597136 GHRHP01286 108 aa8.87□□□□□ -0.99
TRIM28-207ENST00000597136 BAALC-AS2P0C853 105 aa8.87□□□□□ -0.99
TRIM28-207ENST00000597136 H3BQ85 93 aa8.86□□□□□ -0.99
TRIM28-207ENST00000597136 TMEM256-PLSCR3K7ERE1 68 aa8.86□□□□□ -0.99
TRIM28-207ENST00000597136 FAM229BQ4G0N7 80 aa8.85□□□□□ -0.99
TRIM28-207ENST00000597136 SMIM29Q86T20 159 aa8.85□□□□□ -0.99
TRIM28-207ENST00000597136 MTURNQ8N3F0 131 aa8.85□□□□□ -0.99
TRIM28-207ENST00000597136 C3orf22Q8N5N4 141 aa8.85□□□□□ -0.99
TRIM28-207ENST00000597136 KRTAP13-2Q52LG2 175 aa8.84□□□□□ -0.99
TRIM28-207ENST00000597136 UBE2V1Q13404 147 aa8.82□□□□□ -1
TRIM28-207ENST00000597136 LAMTOR3Q9UHA4 124 aa8.82□□□□□ -1
TRIM28-207ENST00000597136 PRO0461Q9UI25 63 aa8.82□□□□□ -1
TRIM28-207ENST00000597136 H3BT86 120 aa8.82□□□□□ -1
TRIM28-207ENST00000597136 CRYGAP11844 174 aa8.82□□□□□ -1
TRIM28-207ENST00000597136 NDUFV3P56181 108 aaKnown RBP8.82□□□□□ -1
TRIM28-207ENST00000597136 ANKRD29Q8N6D5 301 aa8.81□□□□□ -1
TRIM28-207ENST00000597136 SMCPP49901 116 aaPredicted RBP8.8□□□□□ -1
TRIM28-207ENST00000597136 IGLV9-49A0A0B4J1Y8 123 aa8.79□□□□□ -1
TRIM28-207ENST00000597136 F8W1H4 67 aa8.78□□□□□ -1
TRIM28-207ENST00000597136 F8WEM9 126 aa8.78□□□□□ -1
TRIM28-207ENST00000597136 TYMSOSQ8TAI1 123 aa8.78□□□□□ -1
TRIM28-207ENST00000597136 IGLV8-61A0A075B6I0 122 aa8.76□□□□□ -1.01
TRIM28-207ENST00000597136 MOBPQ13875 183 aa8.76□□□□□ -1.01
TRIM28-207ENST00000597136 C9orf153Q5TBE3 101 aa8.75□□□□□ -1.01
TRIM28-207ENST00000597136 A0A1B0GV72 72 aa8.74□□□□□ -1.01
TRIM28-207ENST00000597136 Q8NBF4 154 aa8.73□□□□□ -1.01
TRIM28-207ENST00000597136 OBSCN-AS1Q96MR7 158 aa8.73□□□□□ -1.01
TRIM28-207ENST00000597136 RBM3P98179 157 aaKnown RBP8.72□□□□□ -1.01
TRIM28-207ENST00000597136 SSBP3-AS1Q7Z2R9 100 aa8.72□□□□□ -1.01
TRIM28-207ENST00000597136 JMJD7-PLA2G4BH0Y9G9 81 aa8.71□□□□□ -1.02
TRIM28-207ENST00000597136 Q6JHZ5 121 aa8.71□□□□□ -1.02
TRIM28-207ENST00000597136 IGFL1Q6UW32 110 aa8.7□□□□□ -1.02
TRIM28-207ENST00000597136 A0A0G2JQZ4 141 aa8.69□□□□□ -1.02
TRIM28-207ENST00000597136 TRBV7-4A0A0J9YYF1 115 aa8.68□□□□□ -1.02
TRIM28-207ENST00000597136 ETDBQ3ZM63 59 aa8.68□□□□□ -1.02
TRIM28-207ENST00000597136 TEN1Q86WV5 123 aa8.68□□□□□ -1.02
TRIM28-207ENST00000597136 DSCR8Q96T75 97 aa8.68□□□□□ -1.02
TRIM28-207ENST00000597136 LINC00304Q8N9R0 145 aa8.67□□□□□ -1.02
TRIM28-207ENST00000597136 C14orf132Q9NPU4 83 aa8.67□□□□□ -1.02
TRIM28-207ENST00000597136 HMCN2Q8NDA2 5059 aa8.67□□□□□ -1.02
TRIM28-207ENST00000597136 LOC110117498A0A087WWA1 95 aa8.65□□□□□ -1.03
TRIM28-207ENST00000597136 PDE6GP18545 87 aa8.63□□□□□ -1.03
TRIM28-207ENST00000597136 Q6ZQT0 140 aa8.63□□□□□ -1.03
TRIM28-207ENST00000597136 A0A1W2PNM2 257 aa8.62□□□□□ -1.03
TRIM28-207ENST00000597136 CCKP06307 115 aa8.61□□□□□ -1.03
TRIM28-207ENST00000597136 CD164Q04900 197 aa8.61□□□□□ -1.03
TRIM28-207ENST00000597136 HRCT1Q6UXD1 115 aa8.61□□□□□ -1.03
TRIM28-207ENST00000597136 C4orf48Q5BLP8 95 aa8.61□□□□□ -1.03
TRIM28-207ENST00000597136 Q6Q795 121 aa8.61□□□□□ -1.03
TRIM28-207ENST00000597136 SPAG11AQ6PDA7 123 aa8.6□□□□□ -1.03
TRIM28-207ENST00000597136 VPS25Q9BRG1 176 aa8.59□□□□□ -1.03
TRIM28-207ENST00000597136 SPINK1P00995 79 aa8.58□□□□□ -1.04
TRIM28-207ENST00000597136 TRBV7-7A0A0K0K1E9 115 aa8.57□□□□□ -1.04
TRIM28-207ENST00000597136 RETNLBQ9BQ08 111 aa8.57□□□□□ -1.04
TRIM28-207ENST00000597136 LPAP08519 4548 aa8.57□□□□□ -1.04
TRIM28-207ENST00000597136 C21orf62-AS1Q17RA5 79 aa8.56□□□□□ -1.04
TRIM28-207ENST00000597136 LRP2P98164 4655 aa8.56□□□□□ -1.04
TRIM28-207ENST00000597136 PRR4Q16378 134 aa8.55□□□□□ -1.04
TRIM28-207ENST00000597136 RPS29P62273 56 aaKnown RBP8.53□□□□□ -1.04
TRIM28-207ENST00000597136 A0A087WSZ3 146 aa8.52□□□□□ -1.04
TRIM28-207ENST00000597136 A0A1B0GW54 56 aa8.52□□□□□ -1.04
TRIM28-207ENST00000597136 Q5XG85 94 aa8.51□□□□□ -1.05
TRIM28-207ENST00000597136 LIMD2Q9BT23 127 aa8.5□□□□□ -1.05
TRIM28-207ENST00000597136 SS18L2Q9UHA2 77 aa8.48□□□□□ -1.05
TRIM28-207ENST00000597136 ASB16-AS1Q495Z4 193 aa8.46□□□□□ -1.06
TRIM28-207ENST00000597136 UBR4Q5T4S7 5183 aa8.45□□□□□ -1.06
TRIM28-207ENST00000597136 FAM240AA0A1B0GVK7 77 aa8.44□□□□□ -1.06
TRIM28-207ENST00000597136 J3QR89 54 aa8.44□□□□□ -1.06
TRIM28-207ENST00000597136 LINC00846Q9NV44 126 aa8.44□□□□□ -1.06
TRIM28-207ENST00000597136 C1orf195Q5TG92 126 aa8.43□□□□□ -1.06
TRIM28-207ENST00000597136 IGLV7-46A0A075B6I9 117 aa8.42□□□□□ -1.06
TRIM28-207ENST00000597136 ACYP1P07311 99 aa8.42□□□□□ -1.06
TRIM28-207ENST00000597136 NREPQ16612 68 aa8.41□□□□□ -1.06
TRIM28-207ENST00000597136 Q96NJ1 140 aa8.41□□□□□ -1.06
TRIM28-207ENST00000597136 LINC00472Q9H8W2 130 aa8.4□□□□□ -1.06
TRIM28-207ENST00000597136 K7ERU9 68 aa8.39□□□□□ -1.07
TRIM28-207ENST00000597136 Q6ZVQ6 151 aa8.39□□□□□ -1.07
TRIM28-207ENST00000597136 UBL5Q9BZL1 73 aa8.38□□□□□ -1.07
TRIM28-207ENST00000597136 DEFB116Q30KQ4 102 aa8.37□□□□□ -1.07
TRIM28-207ENST00000597136 FP248Q71RG6 208 aaPredicted RBP8.36□□□□□ -1.07
TRIM28-207ENST00000597136 IGKV4-1P06312 121 aa8.34□□□□□ -1.07
TRIM28-207ENST00000597136 TPRXLQ17RH7 258 aa8.33□□□□□ -1.08
TRIM28-207ENST00000597136 J3KT08 172 aa8.32□□□□□ -1.08
TRIM28-207ENST00000597136 KRTAP13-3Q3SY46 172 aa8.32□□□□□ -1.08
TRIM28-207ENST00000597136 BPY2O14599 106 aa8.31□□□□□ -1.08
TRIM28-207ENST00000597136 SIGMAR1Q99720 223 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms