RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 Q6ZRX8 168 aa11.56□□□□□ -0.56
PNKP-207ENST00000596014 LINC00575Q6W349 94 aa11.55□□□□□ -0.56
PNKP-207ENST00000596014 SMCR5Q8TEV8 140 aa11.55□□□□□ -0.56
PNKP-207ENST00000596014 KRTAP10-8P60410 259 aa11.54□□□□□ -0.56
PNKP-207ENST00000596014 Q9BRP9 147 aa11.53□□□□□ -0.56
PNKP-207ENST00000596014 HERC1Q15751 4861 aa11.53□□□□□ -0.56
PNKP-207ENST00000596014 SNCGO76070 127 aa11.52□□□□□ -0.56
PNKP-207ENST00000596014 PRR26Q8N8Z3 221 aa11.52□□□□□ -0.56
PNKP-207ENST00000596014 FAM240AA0A1B0GVK7 77 aa11.52□□□□□ -0.57
PNKP-207ENST00000596014 TRBV7-6A0A0J9YX20 115 aa11.51□□□□□ -0.57
PNKP-207ENST00000596014 COX7BP24311 80 aa11.51□□□□□ -0.57
PNKP-207ENST00000596014 SIGMAR1Q99720 223 aa11.51□□□□□ -0.57
PNKP-207ENST00000596014 hADV29S1A0JD25 119 aa11.5□□□□□ -0.57
PNKP-207ENST00000596014 SCGB1A1P11684 91 aa11.5□□□□□ -0.57
PNKP-207ENST00000596014 ELOF1P60002 83 aaKnown RBP11.5□□□□□ -0.57
PNKP-207ENST00000596014 ANAPC11Q9NYG5 84 aa11.5□□□□□ -0.57
PNKP-207ENST00000596014 ERC2-IT1O76042 136 aa11.49□□□□□ -0.57
PNKP-207ENST00000596014 C21orf62-AS1Q17RA5 79 aa11.49□□□□□ -0.57
PNKP-207ENST00000596014 OBSCN-AS1Q96MR7 158 aa11.49□□□□□ -0.57
PNKP-207ENST00000596014 SPRR4Q96PI1 79 aa11.48□□□□□ -0.57
PNKP-207ENST00000596014 ZNF706Q9Y5V0 76 aaPredicted RBP11.47□□□□□ -0.57
PNKP-207ENST00000596014 A0A087X002 238 aa11.46□□□□□ -0.57
PNKP-207ENST00000596014 CRYGAP11844 174 aa11.46□□□□□ -0.58
PNKP-207ENST00000596014 FAM229BQ4G0N7 80 aa11.46□□□□□ -0.58
PNKP-207ENST00000596014 TMEM256-PLSCR3K7ERE1 68 aa11.45□□□□□ -0.58
PNKP-207ENST00000596014 C14orf132Q9NPU4 83 aa11.44□□□□□ -0.58
PNKP-207ENST00000596014 DHRS4-AS1Q9P1J3 65 aa11.44□□□□□ -0.58
PNKP-207ENST00000596014 MT-ATP8P03928 68 aa11.43□□□□□ -0.58
PNKP-207ENST00000596014 ACYP1P07311 99 aa11.43□□□□□ -0.58
PNKP-207ENST00000596014 Q6ZQY7 126 aa11.43□□□□□ -0.58
PNKP-207ENST00000596014 JMJD7-PLA2G4BH0Y9G9 81 aa11.41□□□□□ -0.58
PNKP-207ENST00000596014 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.41□□□□□ -0.58
PNKP-207ENST00000596014 H3BQ85 93 aa11.4□□□□□ -0.58
PNKP-207ENST00000596014 KRTAP13-2Q52LG2 175 aa11.4□□□□□ -0.58
PNKP-207ENST00000596014 GAGE2AQ6NT46 116 aa11.4□□□□□ -0.58
PNKP-207ENST00000596014 A0A1B0GV72 72 aa11.4□□□□□ -0.59
PNKP-207ENST00000596014 ST20-AS1Q8NBB2 130 aa11.4□□□□□ -0.59
PNKP-207ENST00000596014 LINC00483Q53H64 154 aa11.39□□□□□ -0.59
PNKP-207ENST00000596014 TYMSOSQ8TAI1 123 aa11.38□□□□□ -0.59
PNKP-207ENST00000596014 GHRHP01286 108 aa11.34□□□□□ -0.59
PNKP-207ENST00000596014 C3orf22Q8N5N4 141 aa11.34□□□□□ -0.59
PNKP-207ENST00000596014 LAMTOR3Q9UHA4 124 aa11.33□□□□□ -0.6
PNKP-207ENST00000596014 CCKP06307 115 aa11.31□□□□□ -0.6
PNKP-207ENST00000596014 SPRR1BP22528 89 aa11.3□□□□□ -0.6
PNKP-207ENST00000596014 DEFB105AQ8NG35 78 aa11.3□□□□□ -0.6
PNKP-207ENST00000596014 RBM3P98179 157 aaKnown RBP11.29□□□□□ -0.6
PNKP-207ENST00000596014 LOC110117498A0A087WWA1 95 aa11.28□□□□□ -0.6
PNKP-207ENST00000596014 LINC00643Q86TS7 51 aa11.27□□□□□ -0.6
PNKP-207ENST00000596014 IGLV9-49A0A0B4J1Y8 123 aa11.27□□□□□ -0.61
PNKP-207ENST00000596014 LINC01547P58512 204 aaPredicted RBP11.27□□□□□ -0.61
PNKP-207ENST00000596014 IGLV5-48A0A075B6I7 105 aa11.26□□□□□ -0.61
PNKP-207ENST00000596014 Q6ZQT0 140 aa11.26□□□□□ -0.61
PNKP-207ENST00000596014 Q6Q795 121 aa11.25□□□□□ -0.61
PNKP-207ENST00000596014 LINC00304Q8N9R0 145 aa11.25□□□□□ -0.61
PNKP-207ENST00000596014 TRBV7-7A0A0K0K1E9 115 aa11.24□□□□□ -0.61
PNKP-207ENST00000596014 NDUFV3P56181 108 aaKnown RBP11.24□□□□□ -0.61
PNKP-207ENST00000596014 MOBPQ13875 183 aa11.24□□□□□ -0.61
PNKP-207ENST00000596014 LINC00846Q9NV44 126 aa11.24□□□□□ -0.61
PNKP-207ENST00000596014 DSCR8Q96T75 97 aa11.23□□□□□ -0.61
PNKP-207ENST00000596014 SSBP3-AS1Q7Z2R9 100 aa11.22□□□□□ -0.61
PNKP-207ENST00000596014 Q8N377 158 aa11.22□□□□□ -0.61
PNKP-207ENST00000596014 Q8NBF4 154 aa11.22□□□□□ -0.61
PNKP-207ENST00000596014 TRBV7-4A0A0J9YYF1 115 aa11.2□□□□□ -0.62
PNKP-207ENST00000596014 PDE6GP18545 87 aa11.2□□□□□ -0.62
PNKP-207ENST00000596014 C9orf153Q5TBE3 101 aa11.2□□□□□ -0.62
PNKP-207ENST00000596014 SMIM29Q86T20 159 aa11.2□□□□□ -0.62
PNKP-207ENST00000596014 HMCN2Q8NDA2 5059 aa11.2□□□□□ -0.62
PNKP-207ENST00000596014 Q6JHZ5 121 aa11.19□□□□□ -0.62
PNKP-207ENST00000596014 SPAG11AQ6PDA7 123 aa11.17□□□□□ -0.62
PNKP-207ENST00000596014 IMUPQ9GZP8 106 aa11.17□□□□□ -0.62
PNKP-207ENST00000596014 C4orf48Q5BLP8 95 aa11.16□□□□□ -0.62
PNKP-207ENST00000596014 ATP5EP2Q5VTU8 51 aa11.11□□□□□ -0.63
PNKP-207ENST00000596014 UBL5Q9BZL1 73 aa11.11□□□□□ -0.63
PNKP-207ENST00000596014 SPINK1P00995 79 aa11.11□□□□□ -0.63
PNKP-207ENST00000596014 IGKV3D-7A0A0C4DH55 119 aa11.1□□□□□ -0.63
PNKP-207ENST00000596014 F8WEM9 126 aa11.08□□□□□ -0.64
PNKP-207ENST00000596014 FAM236AA0A1B0GUQ0 79 aa11.05□□□□□ -0.64
PNKP-207ENST00000596014 FAM236BA0A1B0GV22 79 aa11.05□□□□□ -0.64
PNKP-207ENST00000596014 Q6ZVQ6 151 aa11.05□□□□□ -0.64
PNKP-207ENST00000596014 ANAPC13Q9BS18 74 aa11.05□□□□□ -0.64
PNKP-207ENST00000596014 A0A0G2JQZ4 141 aa11.04□□□□□ -0.64
PNKP-207ENST00000596014 RPS29P62273 56 aaKnown RBP11.04□□□□□ -0.64
PNKP-207ENST00000596014 HRCT1Q6UXD1 115 aa11.03□□□□□ -0.64
PNKP-207ENST00000596014 RETNLBQ9BQ08 111 aa11.03□□□□□ -0.64
PNKP-207ENST00000596014 IGLV8-61A0A075B6I0 122 aa11.02□□□□□ -0.64
PNKP-207ENST00000596014 PRR4Q16378 134 aa11.02□□□□□ -0.64
PNKP-207ENST00000596014 CD164Q04900 197 aa11.01□□□□□ -0.65
PNKP-207ENST00000596014 LRP2P98164 4655 aa10.98□□□□□ -0.65
PNKP-207ENST00000596014 LPAP08519 4548 aa10.98□□□□□ -0.65
PNKP-207ENST00000596014 HIST1H4AP62805 103 aaKnown RBP10.98□□□□□ -0.65
PNKP-207ENST00000596014 A0A1W2PNM2 257 aa10.97□□□□□ -0.65
PNKP-207ENST00000596014 IGFL1Q6UW32 110 aa10.97□□□□□ -0.65
PNKP-207ENST00000596014 A0A087WVE0 104 aa10.96□□□□□ -0.65
PNKP-207ENST00000596014 CXCL6P80162 114 aa10.95□□□□□ -0.66
PNKP-207ENST00000596014 A0A1B0GW54 56 aa10.95□□□□□ -0.66
PNKP-207ENST00000596014 LIMD2Q9BT23 127 aa10.94□□□□□ -0.66
PNKP-207ENST00000596014 IGLV7-46A0A075B6I9 117 aa10.9□□□□□ -0.66
PNKP-207ENST00000596014 ATOX1O00244 68 aa10.9□□□□□ -0.66
PNKP-207ENST00000596014 FP248Q71RG6 208 aaPredicted RBP10.9□□□□□ -0.66
PNKP-207ENST00000596014 NREPQ16612 68 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms