RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 GAGE2AQ6NT46 116 aa8.86□□□□□ -0.99
SHKBP1-211ENST00000595945 TEN1Q86WV5 123 aa8.86□□□□□ -0.99
SHKBP1-211ENST00000595945 OBSCN-AS1Q96MR7 158 aa8.86□□□□□ -0.99
SHKBP1-211ENST00000595945 NDUFV3P56181 108 aaKnown RBP8.85□□□□□ -0.99
SHKBP1-211ENST00000595945 SPINK6Q6UWN8 80 aa8.85□□□□□ -0.99
SHKBP1-211ENST00000595945 KRTAP17-1Q9BYP8 105 aa8.85□□□□□ -0.99
SHKBP1-211ENST00000595945 FAM229AH3BQW9 127 aa8.84□□□□□ -0.99
SHKBP1-211ENST00000595945 PLA2G1BP04054 148 aaKnown RBP8.83□□□□□ -1
SHKBP1-211ENST00000595945 C3orf22Q8N5N4 141 aa8.83□□□□□ -1
SHKBP1-211ENST00000595945 Q5VSD8 79 aa8.82□□□□□ -1
SHKBP1-211ENST00000595945 LAMTOR3Q9UHA4 124 aa8.82□□□□□ -1
SHKBP1-211ENST00000595945 JMJD7-PLA2G4BH0Y9G9 81 aa8.81□□□□□ -1
SHKBP1-211ENST00000595945 IGLV8-61A0A075B6I0 122 aa8.8□□□□□ -1
SHKBP1-211ENST00000595945 KRTAP1-4P0C5Y4 121 aa8.8□□□□□ -1
SHKBP1-211ENST00000595945 Q8N1X5 172 aa8.8□□□□□ -1
SHKBP1-211ENST00000595945 ANAPC11Q9NYG5 84 aa8.79□□□□□ -1
SHKBP1-211ENST00000595945 TRBV7-4A0A0J9YYF1 115 aa8.77□□□□□ -1.01
SHKBP1-211ENST00000595945 RBM3P98179 157 aaKnown RBP8.77□□□□□ -1.01
SHKBP1-211ENST00000595945 FAM229BQ4G0N7 80 aa8.77□□□□□ -1.01
SHKBP1-211ENST00000595945 A0A1B0GV72 72 aa8.76□□□□□ -1.01
SHKBP1-211ENST00000595945 F8WEM9 126 aa8.76□□□□□ -1.01
SHKBP1-211ENST00000595945 LOC110117498A0A087WWA1 95 aa8.75□□□□□ -1.01
SHKBP1-211ENST00000595945 C14orf132Q9NPU4 83 aa8.75□□□□□ -1.01
SHKBP1-211ENST00000595945 HERC2O95714 4834 aa8.75□□□□□ -1.01
SHKBP1-211ENST00000595945 Q6ZQT0 140 aa8.72□□□□□ -1.01
SHKBP1-211ENST00000595945 FLG2Q5D862 2391 aaPredicted RBP8.72□□□□□ -1.01
SHKBP1-211ENST00000595945 A0A087X002 238 aa8.71□□□□□ -1.02
SHKBP1-211ENST00000595945 IGLV9-49A0A0B4J1Y8 123 aa8.71□□□□□ -1.02
SHKBP1-211ENST00000595945 PDE6GP18545 87 aa8.71□□□□□ -1.02
SHKBP1-211ENST00000595945 KRTAP13-2Q52LG2 175 aa8.71□□□□□ -1.02
SHKBP1-211ENST00000595945 Q6JHZ5 121 aa8.71□□□□□ -1.02
SHKBP1-211ENST00000595945 IGFL1Q6UW32 110 aa8.71□□□□□ -1.02
SHKBP1-211ENST00000595945 DSCR8Q96T75 97 aa8.71□□□□□ -1.02
SHKBP1-211ENST00000595945 Q8NBF4 154 aa8.7□□□□□ -1.02
SHKBP1-211ENST00000595945 CCKP06307 115 aa8.69□□□□□ -1.02
SHKBP1-211ENST00000595945 CRYGAP11844 174 aa8.69□□□□□ -1.02
SHKBP1-211ENST00000595945 MOBPQ13875 183 aa8.69□□□□□ -1.02
SHKBP1-211ENST00000595945 C9orf153Q5TBE3 101 aa8.69□□□□□ -1.02
SHKBP1-211ENST00000595945 C21orf62-AS1Q17RA5 79 aa8.68□□□□□ -1.02
SHKBP1-211ENST00000595945 A0A0G2JQZ4 141 aa8.67□□□□□ -1.02
SHKBP1-211ENST00000595945 A0A1W2PNM2 257 aa8.67□□□□□ -1.02
SHKBP1-211ENST00000595945 SSBP3-AS1Q7Z2R9 100 aa8.67□□□□□ -1.02
SHKBP1-211ENST00000595945 FAT3Q8TDW7 4589 aa8.65□□□□□ -1.03
SHKBP1-211ENST00000595945 Q6Q795 121 aa8.64□□□□□ -1.03
SHKBP1-211ENST00000595945 PRR26Q8N8Z3 221 aa8.64□□□□□ -1.03
SHKBP1-211ENST00000595945 LRP1Q07954 4544 aaKnown RBP8.63□□□□□ -1.03
SHKBP1-211ENST00000595945 J3QR89 54 aa8.63□□□□□ -1.03
SHKBP1-211ENST00000595945 KRTAP4-5Q9BYR2 181 aa8.63□□□□□ -1.03
SHKBP1-211ENST00000595945 FAM240AA0A1B0GVK7 77 aa8.62□□□□□ -1.03
SHKBP1-211ENST00000595945 A0A1B0GW54 56 aa8.61□□□□□ -1.03
SHKBP1-211ENST00000595945 K7ERU9 68 aa8.61□□□□□ -1.03
SHKBP1-211ENST00000595945 VPS25Q9BRG1 176 aa8.61□□□□□ -1.03
SHKBP1-211ENST00000595945 TYMSOSQ8TAI1 123 aa8.6□□□□□ -1.03
SHKBP1-211ENST00000595945 ABCA13Q86UQ4 5058 aa8.59□□□□□ -1.03
SHKBP1-211ENST00000595945 ACYP1P07311 99 aa8.59□□□□□ -1.03
SHKBP1-211ENST00000595945 CD164Q04900 197 aa8.59□□□□□ -1.03
SHKBP1-211ENST00000595945 TRBV7-7A0A0K0K1E9 115 aa8.57□□□□□ -1.04
SHKBP1-211ENST00000595945 KRTAP10-8P60410 259 aa8.56□□□□□ -1.04
SHKBP1-211ENST00000595945 LINC00846Q9NV44 126 aa8.55□□□□□ -1.04
SHKBP1-211ENST00000595945 MYCBP2O75592 4640 aa8.54□□□□□ -1.04
SHKBP1-211ENST00000595945 TNXBP22105 4242 aa8.53□□□□□ -1.04
SHKBP1-211ENST00000595945 A0A087WSZ3 146 aa8.53□□□□□ -1.04
SHKBP1-211ENST00000595945 HRCT1Q6UXD1 115 aa8.53□□□□□ -1.04
SHKBP1-211ENST00000595945 LINC00304Q8N9R0 145 aa8.52□□□□□ -1.05
SHKBP1-211ENST00000595945 DMBT1Q9UGM3 2413 aaPredicted RBP8.51□□□□□ -1.05
SHKBP1-211ENST00000595945 CDIP1Q9H305 208 aa8.51□□□□□ -1.05
SHKBP1-211ENST00000595945 OXTP01178 125 aa8.5□□□□□ -1.05
SHKBP1-211ENST00000595945 Q5XG85 94 aa8.5□□□□□ -1.05
SHKBP1-211ENST00000595945 SPAG11AQ6PDA7 123 aa8.5□□□□□ -1.05
SHKBP1-211ENST00000595945 MT1HL1P0DM35 61 aa8.49□□□□□ -1.05
SHKBP1-211ENST00000595945 Q6ZVQ6 151 aa8.49□□□□□ -1.05
SHKBP1-211ENST00000595945 SPINK1P00995 79 aa8.48□□□□□ -1.05
SHKBP1-211ENST00000595945 C4orf48Q5BLP8 95 aa8.48□□□□□ -1.05
SHKBP1-211ENST00000595945 RPS29P62273 56 aaKnown RBP8.47□□□□□ -1.05
SHKBP1-211ENST00000595945 UBL5Q9BZL1 73 aa8.47□□□□□ -1.05
SHKBP1-211ENST00000595945 SS18L2Q9UHA2 77 aa8.47□□□□□ -1.05
SHKBP1-211ENST00000595945 NREPQ16612 68 aa8.46□□□□□ -1.06
SHKBP1-211ENST00000595945 ASB16-AS1Q495Z4 193 aa8.46□□□□□ -1.06
SHKBP1-211ENST00000595945 KRTAP29-1A8MX34 341 aaPredicted RBP8.45□□□□□ -1.06
SHKBP1-211ENST00000595945 Q96NJ1 140 aa8.44□□□□□ -1.06
SHKBP1-211ENST00000595945 LIMD2Q9BT23 127 aa8.44□□□□□ -1.06
SHKBP1-211ENST00000595945 LINC00472Q9H8W2 130 aa8.44□□□□□ -1.06
SHKBP1-211ENST00000595945 LINC00643Q86TS7 51 aa8.43□□□□□ -1.06
SHKBP1-211ENST00000595945 C1orf195Q5TG92 126 aa8.38□□□□□ -1.07
SHKBP1-211ENST00000595945 BPY2O14599 106 aa8.37□□□□□ -1.07
SHKBP1-211ENST00000595945 CXCL6P80162 114 aa8.37□□□□□ -1.07
SHKBP1-211ENST00000595945 ATP5EP2Q5VTU8 51 aa8.37□□□□□ -1.07
SHKBP1-211ENST00000595945 DEFB116Q30KQ4 102 aa8.36□□□□□ -1.07
SHKBP1-211ENST00000595945 SIGMAR1Q99720 223 aa8.36□□□□□ -1.07
SHKBP1-211ENST00000595945 IGKV3D-7A0A0C4DH55 119 aa8.35□□□□□ -1.07
SHKBP1-211ENST00000595945 J3KT08 172 aa8.35□□□□□ -1.07
SHKBP1-211ENST00000595945 DSCR10P59022 87 aa8.35□□□□□ -1.07
SHKBP1-211ENST00000595945 MT-ATP8P03928 68 aa8.34□□□□□ -1.07
SHKBP1-211ENST00000595945 PCLOQ9Y6V0 5065 aa8.33□□□□□ -1.08
SHKBP1-211ENST00000595945 IGKV4-1P06312 121 aa8.32□□□□□ -1.08
SHKBP1-211ENST00000595945 A8MWP4 228 aa8.29□□□□□ -1.08
SHKBP1-211ENST00000595945 J3QL48 77 aa8.27□□□□□ -1.09
SHKBP1-211ENST00000595945 K7EQZ3 153 aa8.27□□□□□ -1.09
SHKBP1-211ENST00000595945 Q8N9L7 120 aa8.27□□□□□ -1.09
SHKBP1-211ENST00000595945 IMUPQ9GZP8 106 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms