RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 FAM229AH3BQW9 127 aa7.97□□□□□ -1.13
SHKBP1-209ENST00000595803 ST20-AS1Q8NBB2 130 aa7.97□□□□□ -1.13
SHKBP1-209ENST00000595803 SMCPP49901 116 aaPredicted RBP7.96□□□□□ -1.14
SHKBP1-209ENST00000595803 TEX49A0A1B0GTD5 131 aa7.94□□□□□ -1.14
SHKBP1-209ENST00000595803 PPDPFLQ8WWR9 84 aa7.94□□□□□ -1.14
SHKBP1-209ENST00000595803 LINC01600Q96MT4 127 aa7.94□□□□□ -1.14
SHKBP1-209ENST00000595803 ZNF706Q9Y5V0 76 aaPredicted RBP7.94□□□□□ -1.14
SHKBP1-209ENST00000595803 IGLV5-48A0A075B6I7 105 aa7.93□□□□□ -1.14
SHKBP1-209ENST00000595803 GAGE2AQ6NT46 116 aa7.93□□□□□ -1.14
SHKBP1-209ENST00000595803 Q8N377 158 aa7.93□□□□□ -1.14
SHKBP1-209ENST00000595803 LAMTOR3Q9UHA4 124 aa7.93□□□□□ -1.14
SHKBP1-209ENST00000595803 LINC01547P58512 204 aaPredicted RBP7.92□□□□□ -1.14
SHKBP1-209ENST00000595803 PLA2G1BP04054 148 aaKnown RBP7.9□□□□□ -1.14
SHKBP1-209ENST00000595803 NDUFV3P56181 108 aaKnown RBP7.9□□□□□ -1.14
SHKBP1-209ENST00000595803 ETDBQ3ZM63 59 aa7.9□□□□□ -1.14
SHKBP1-209ENST00000595803 SPRR4Q96PI1 79 aa7.9□□□□□ -1.14
SHKBP1-209ENST00000595803 LRP1Q07954 4544 aaKnown RBP7.88□□□□□ -1.15
SHKBP1-209ENST00000595803 JMJD7-PLA2G4BH0Y9G9 81 aa7.88□□□□□ -1.15
SHKBP1-209ENST00000595803 SPRR1BP22528 89 aa7.88□□□□□ -1.15
SHKBP1-209ENST00000595803 SPINK6Q6UWN8 80 aa7.88□□□□□ -1.15
SHKBP1-209ENST00000595803 TEN1Q86WV5 123 aa7.88□□□□□ -1.15
SHKBP1-209ENST00000595803 A0A1B0GV72 72 aa7.86□□□□□ -1.15
SHKBP1-209ENST00000595803 F8WEM9 126 aa7.86□□□□□ -1.15
SHKBP1-209ENST00000595803 RBM3P98179 157 aaKnown RBP7.85□□□□□ -1.15
SHKBP1-209ENST00000595803 SMIM29Q86T20 159 aa7.85□□□□□ -1.15
SHKBP1-209ENST00000595803 C3orf22Q8N5N4 141 aa7.85□□□□□ -1.15
SHKBP1-209ENST00000595803 LINC00483Q53H64 154 aa7.84□□□□□ -1.15
SHKBP1-209ENST00000595803 KRTAP9-2Q9BYQ4 174 aa7.84□□□□□ -1.15
SHKBP1-209ENST00000595803 OBSCN-AS1Q96MR7 158 aa7.83□□□□□ -1.16
SHKBP1-209ENST00000595803 KRTAP10-4P60372 401 aaPredicted RBP7.82□□□□□ -1.16
SHKBP1-209ENST00000595803 DSCR8Q96T75 97 aa7.82□□□□□ -1.16
SHKBP1-209ENST00000595803 ANAPC11Q9NYG5 84 aa7.82□□□□□ -1.16
SHKBP1-209ENST00000595803 LRP2P98164 4655 aa7.82□□□□□ -1.16
SHKBP1-209ENST00000595803 C14orf132Q9NPU4 83 aa7.81□□□□□ -1.16
SHKBP1-209ENST00000595803 IGLV9-49A0A0B4J1Y8 123 aa7.79□□□□□ -1.16
SHKBP1-209ENST00000595803 KRTAP9-6A0A140TA67 174 aa7.79□□□□□ -1.16
SHKBP1-209ENST00000595803 OXTP01178 125 aa7.79□□□□□ -1.16
SHKBP1-209ENST00000595803 PDE6GP18545 87 aa7.79□□□□□ -1.16
SHKBP1-209ENST00000595803 C9orf153Q5TBE3 101 aa7.79□□□□□ -1.16
SHKBP1-209ENST00000595803 FAM229BQ4G0N7 80 aa7.78□□□□□ -1.16
SHKBP1-209ENST00000595803 FAT3Q8TDW7 4589 aa7.77□□□□□ -1.17
SHKBP1-209ENST00000595803 IGLV8-61A0A075B6I0 122 aa7.77□□□□□ -1.17
SHKBP1-209ENST00000595803 LOC110117498A0A087WWA1 95 aa7.77□□□□□ -1.17
SHKBP1-209ENST00000595803 J3QR89 54 aa7.77□□□□□ -1.17
SHKBP1-209ENST00000595803 Q6JHZ5 121 aa7.77□□□□□ -1.17
SHKBP1-209ENST00000595803 TRBV7-4A0A0J9YYF1 115 aa7.76□□□□□ -1.17
SHKBP1-209ENST00000595803 CRYGAP11844 174 aa7.76□□□□□ -1.17
SHKBP1-209ENST00000595803 CCKP06307 115 aa7.75□□□□□ -1.17
SHKBP1-209ENST00000595803 KRTAP1-4P0C5Y4 121 aa7.75□□□□□ -1.17
SHKBP1-209ENST00000595803 MOBPQ13875 183 aa7.75□□□□□ -1.17
SHKBP1-209ENST00000595803 C21orf62-AS1Q17RA5 79 aa7.75□□□□□ -1.17
SHKBP1-209ENST00000595803 IGFL1Q6UW32 110 aa7.74□□□□□ -1.17
SHKBP1-209ENST00000595803 Q6ZQT0 140 aa7.74□□□□□ -1.17
SHKBP1-209ENST00000595803 SSBP3-AS1Q7Z2R9 100 aa7.74□□□□□ -1.17
SHKBP1-209ENST00000595803 Q8NBF4 154 aa7.74□□□□□ -1.17
SHKBP1-209ENST00000595803 VPS25Q9BRG1 176 aa7.74□□□□□ -1.17
SHKBP1-209ENST00000595803 PKHD1L1Q86WI1 4243 aa7.73□□□□□ -1.17
SHKBP1-209ENST00000595803 A0A087X002 238 aa7.71□□□□□ -1.18
SHKBP1-209ENST00000595803 A0A0G2JQZ4 141 aa7.71□□□□□ -1.18
SHKBP1-209ENST00000595803 K7ERU9 68 aa7.71□□□□□ -1.18
SHKBP1-209ENST00000595803 A0A1W2PNM2 257 aa7.69□□□□□ -1.18
SHKBP1-209ENST00000595803 ACYP1P07311 99 aa7.69□□□□□ -1.18
SHKBP1-209ENST00000595803 KRTAP13-2Q52LG2 175 aa7.69□□□□□ -1.18
SHKBP1-209ENST00000595803 TYMSOSQ8TAI1 123 aa7.69□□□□□ -1.18
SHKBP1-209ENST00000595803 PRR26Q8N8Z3 221 aa7.68□□□□□ -1.18
SHKBP1-209ENST00000595803 A0A1B0GW54 56 aa7.66□□□□□ -1.18
SHKBP1-209ENST00000595803 HRCT1Q6UXD1 115 aa7.66□□□□□ -1.18
SHKBP1-209ENST00000595803 C4orf48Q5BLP8 95 aa7.65□□□□□ -1.18
SHKBP1-209ENST00000595803 Q6Q795 121 aa7.65□□□□□ -1.18
SHKBP1-209ENST00000595803 FAM240AA0A1B0GVK7 77 aa7.64□□□□□ -1.19
SHKBP1-209ENST00000595803 MT1HL1P0DM35 61 aa7.63□□□□□ -1.19
SHKBP1-209ENST00000595803 CD164Q04900 197 aa7.63□□□□□ -1.19
SHKBP1-209ENST00000595803 TRBV7-7A0A0K0K1E9 115 aa7.62□□□□□ -1.19
SHKBP1-209ENST00000595803 LINC00846Q9NV44 126 aa7.62□□□□□ -1.19
SHKBP1-209ENST00000595803 TNXBP22105 4242 aa7.62□□□□□ -1.19
SHKBP1-209ENST00000595803 A0A087WSZ3 146 aa7.61□□□□□ -1.19
SHKBP1-209ENST00000595803 NREPQ16612 68 aa7.6□□□□□ -1.19
SHKBP1-209ENST00000595803 UBL5Q9BZL1 73 aa7.6□□□□□ -1.19
SHKBP1-209ENST00000595803 SPAG11AQ6PDA7 123 aa7.59□□□□□ -1.19
SHKBP1-209ENST00000595803 LINC00304Q8N9R0 145 aa7.58□□□□□ -1.2
SHKBP1-209ENST00000595803 KRTAP10-8P60410 259 aa7.57□□□□□ -1.2
SHKBP1-209ENST00000595803 SPINK1P00995 79 aa7.56□□□□□ -1.2
SHKBP1-209ENST00000595803 Q6ZVQ6 151 aa7.56□□□□□ -1.2
SHKBP1-209ENST00000595803 SS18L2Q9UHA2 77 aa7.56□□□□□ -1.2
SHKBP1-209ENST00000595803 LIMD2Q9BT23 127 aa7.54□□□□□ -1.2
SHKBP1-209ENST00000595803 CDIP1Q9H305 208 aa7.54□□□□□ -1.2
SHKBP1-209ENST00000595803 LINC00643Q86TS7 51 aa7.53□□□□□ -1.2
SHKBP1-209ENST00000595803 FAT4Q6V0I7 4981 aa7.52□□□□□ -1.21
SHKBP1-209ENST00000595803 Q5XG85 94 aa7.51□□□□□ -1.21
SHKBP1-209ENST00000595803 BPY2O14599 106 aa7.5□□□□□ -1.21
SHKBP1-209ENST00000595803 RPS29P62273 56 aaKnown RBP7.5□□□□□ -1.21
SHKBP1-209ENST00000595803 ASB16-AS1Q495Z4 193 aa7.49□□□□□ -1.21
SHKBP1-209ENST00000595803 IGKV3D-7A0A0C4DH55 119 aa7.48□□□□□ -1.21
SHKBP1-209ENST00000595803 DEFB116Q30KQ4 102 aa7.48□□□□□ -1.21
SHKBP1-209ENST00000595803 SIGMAR1Q99720 223 aa7.48□□□□□ -1.21
SHKBP1-209ENST00000595803 LINC00472Q9H8W2 130 aa7.48□□□□□ -1.21
SHKBP1-209ENST00000595803 J3KT08 172 aa7.47□□□□□ -1.21
SHKBP1-209ENST00000595803 ATP5EP2Q5VTU8 51 aa7.46□□□□□ -1.22
SHKBP1-209ENST00000595803 IGKV4-1P06312 121 aa7.45□□□□□ -1.22
SHKBP1-209ENST00000595803 CXCL6P80162 114 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms