RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 PCP2Q8IVA1 136 aa10.11□□□□□ -0.79
CCDC43-205ENST00000592333 F8WEM9 126 aa10.09□□□□□ -0.79
CCDC43-205ENST00000592333 FSIP2Q5CZC0 6907 aa10.08□□□□□ -0.8
CCDC43-205ENST00000592333 CRCT1Q9UGL9 99 aa10.08□□□□□ -0.8
CCDC43-205ENST00000592333 Q6JHZ5 121 aa10.07□□□□□ -0.8
CCDC43-205ENST00000592333 ATOH7Q8N100 152 aa10.07□□□□□ -0.8
CCDC43-205ENST00000592333 A0A0G2JQZ4 141 aa10.05□□□□□ -0.8
CCDC43-205ENST00000592333 LINC00575Q6W349 94 aa10.05□□□□□ -0.8
CCDC43-205ENST00000592333 hADV29S1A0JD25 119 aa10.03□□□□□ -0.8
CCDC43-205ENST00000592333 PPDPFLQ8WWR9 84 aa10.02□□□□□ -0.81
CCDC43-205ENST00000592333 CLEC2BQ92478 149 aa10.01□□□□□ -0.81
CCDC43-205ENST00000592333 KRTAP10-6P60371 365 aaPredicted RBP10□□□□□ -0.81
CCDC43-205ENST00000592333 Q6ZQY7 126 aa10□□□□□ -0.81
CCDC43-205ENST00000592333 TRBV7-7A0A0K0K1E9 115 aa9.99□□□□□ -0.81
CCDC43-205ENST00000592333 HSBP1L1C9JCN9 74 aa9.99□□□□□ -0.81
CCDC43-205ENST00000592333 OCIAD2Q56VL3 154 aa9.98□□□□□ -0.81
CCDC43-205ENST00000592333 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.98□□□□□ -0.81
CCDC43-205ENST00000592333 COX6B2Q6YFQ2 88 aa9.97□□□□□ -0.81
CCDC43-205ENST00000592333 BVES-AS1Q5T3Y7 98 aa9.96□□□□□ -0.82
CCDC43-205ENST00000592333 IGFL1Q6UW32 110 aa9.96□□□□□ -0.82
CCDC43-205ENST00000592333 M0R2T5 61 aa9.95□□□□□ -0.82
CCDC43-205ENST00000592333 SCGB1D1O95968 90 aa9.95□□□□□ -0.82
CCDC43-205ENST00000592333 S100A2P29034 98 aa9.93□□□□□ -0.82
CCDC43-205ENST00000592333 HIST3H2BBQ8N257 126 aa9.93□□□□□ -0.82
CCDC43-205ENST00000592333 HIST1H2BLQ99880 126 aa9.93□□□□□ -0.82
CCDC43-205ENST00000592333 Q75L30 129 aa9.92□□□□□ -0.82
CCDC43-205ENST00000592333 KRTAP4-8Q9BYQ9 185 aa9.92□□□□□ -0.82
CCDC43-205ENST00000592333 ATP11AUNQ6ZP68 121 aa9.91□□□□□ -0.82
CCDC43-205ENST00000592333 SNHG12Q9BXW3 62 aa9.91□□□□□ -0.82
CCDC43-205ENST00000592333 LST1O00453 97 aa9.87□□□□□ -0.83
CCDC43-205ENST00000592333 SNCGO76070 127 aa9.87□□□□□ -0.83
CCDC43-205ENST00000592333 Q6Q795 121 aa9.87□□□□□ -0.83
CCDC43-205ENST00000592333 SS18L2Q9UHA2 77 aa9.87□□□□□ -0.83
CCDC43-205ENST00000592333 OBSCN-AS1Q96MR7 158 aa9.86□□□□□ -0.83
CCDC43-205ENST00000592333 HIST1H4GQ99525 98 aa9.86□□□□□ -0.83
CCDC43-205ENST00000592333 FLGP20930 4061 aaPredicted RBP9.84□□□□□ -0.83
CCDC43-205ENST00000592333 DLEU1O43261 78 aa9.83□□□□□ -0.84
CCDC43-205ENST00000592333 GHRHP01286 108 aa9.83□□□□□ -0.84
CCDC43-205ENST00000592333 C12orf57Q99622 126 aa9.83□□□□□ -0.84
CCDC43-205ENST00000592333 H0YGX0 51 aa9.82□□□□□ -0.84
CCDC43-205ENST00000592333 S100A6P06703 90 aa9.82□□□□□ -0.84
CCDC43-205ENST00000592333 COX8AP10176 69 aa9.82□□□□□ -0.84
CCDC43-205ENST00000592333 TEN1Q86WV5 123 aa9.8□□□□□ -0.84
CCDC43-205ENST00000592333 H3BUT2 72 aa9.78□□□□□ -0.84
CCDC43-205ENST00000592333 Q96NJ1 140 aa9.78□□□□□ -0.84
CCDC43-205ENST00000592333 C20orf166-AS1Q96NR2 134 aa9.78□□□□□ -0.84
CCDC43-205ENST00000592333 CFC1P0CG37 223 aa9.76□□□□□ -0.85
CCDC43-205ENST00000592333 RAB37Q96AX2 223 aa9.76□□□□□ -0.85
CCDC43-205ENST00000592333 A0A0B4J2C4 111 aa9.75□□□□□ -0.85
CCDC43-205ENST00000592333 A0A1B0GX51 115 aa9.75□□□□□ -0.85
CCDC43-205ENST00000592333 NDUFV3P56181 108 aaKnown RBP9.75□□□□□ -0.85
CCDC43-205ENST00000592333 HIGD1BQ9P298 99 aa9.75□□□□□ -0.85
CCDC43-205ENST00000592333 A8MUU9 505 aa9.74□□□□□ -0.85
CCDC43-205ENST00000592333 S100A1P23297 94 aa9.72□□□□□ -0.85
CCDC43-205ENST00000592333 TRBV20-1A0A075B6N2 111 aa9.69□□□□□ -0.86
CCDC43-205ENST00000592333 A0A087WSZ3 146 aa9.69□□□□□ -0.86
CCDC43-205ENST00000592333 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.68□□□□□ -0.86
CCDC43-205ENST00000592333 H3BMG7 143 aa9.68□□□□□ -0.86
CCDC43-205ENST00000592333 FAM218AQ96MZ4 157 aa9.68□□□□□ -0.86
CCDC43-205ENST00000592333 TMEM238LA0A1B0GVL6 79 aa9.65□□□□□ -0.86
CCDC43-205ENST00000592333 C14orf144Q96I85 54 aa9.65□□□□□ -0.86
CCDC43-205ENST00000592333 H3BQ85 93 aa9.64□□□□□ -0.87
CCDC43-205ENST00000592333 PRO1854Q9UHT4 67 aa9.64□□□□□ -0.87
CCDC43-205ENST00000592333 FABP2P12104 132 aa9.62□□□□□ -0.87
CCDC43-205ENST00000592333 SPATA45Q537H7 98 aa9.62□□□□□ -0.87
CCDC43-205ENST00000592333 CEND1Q8N111 149 aa9.62□□□□□ -0.87
CCDC43-205ENST00000592333 C2orf91Q6ZV80 131 aa9.61□□□□□ -0.87
CCDC43-205ENST00000592333 TRBV7-4A0A0J9YYF1 115 aa9.6□□□□□ -0.87
CCDC43-205ENST00000592333 PAM16Q9Y3D7 125 aa9.6□□□□□ -0.87
CCDC43-205ENST00000592333 A0A1W2PNM2 257 aa9.59□□□□□ -0.87
CCDC43-205ENST00000592333 VAMP8Q9BV40 100 aa9.59□□□□□ -0.87
CCDC43-205ENST00000592333 KRTAP9-8Q9BYQ0 159 aa9.59□□□□□ -0.87
CCDC43-205ENST00000592333 LINC00313P59037 77 aa9.58□□□□□ -0.88
CCDC43-205ENST00000592333 DSCR10P59022 87 aa9.57□□□□□ -0.88
CCDC43-205ENST00000592333 SIGMAR1Q99720 223 aa9.57□□□□□ -0.88
CCDC43-205ENST00000592333 ANKRD29Q8N6D5 301 aa9.56□□□□□ -0.88
CCDC43-205ENST00000592333 DNAL4O96015 105 aa9.55□□□□□ -0.88
CCDC43-205ENST00000592333 TRIAP1O43715 76 aa9.54□□□□□ -0.88
CCDC43-205ENST00000592333 ORMDL1Q9P0S3 153 aa9.54□□□□□ -0.88
CCDC43-205ENST00000592333 TMEM256-PLSCR3K7ERE1 68 aa9.53□□□□□ -0.88
CCDC43-205ENST00000592333 IGKV4-1P06312 121 aa9.53□□□□□ -0.88
CCDC43-205ENST00000592333 KRTAP16-1A8MUX0 517 aa9.52□□□□□ -0.89
CCDC43-205ENST00000592333 KRTAP4-12Q9BQ66 201 aa9.52□□□□□ -0.89
CCDC43-205ENST00000592333 FXYD2P54710 66 aa9.51□□□□□ -0.89
CCDC43-205ENST00000592333 COX6CP09669 75 aa9.5□□□□□ -0.89
CCDC43-205ENST00000592333 LINC00472Q9H8W2 130 aa9.49□□□□□ -0.89
CCDC43-205ENST00000592333 RBM12B-AS1Q9P1G2 102 aa9.49□□□□□ -0.89
CCDC43-205ENST00000592333 LCE3BQ5TA77 95 aa9.48□□□□□ -0.89
CCDC43-205ENST00000592333 MPLKIPQ8TAP9 179 aa9.47□□□□□ -0.89
CCDC43-205ENST00000592333 FAM236DA0A1B0GTK5 79 aa9.46□□□□□ -0.9
CCDC43-205ENST00000592333 CCKP06307 115 aa9.46□□□□□ -0.9
CCDC43-205ENST00000592333 FAM236CP0DP71 79 aa9.46□□□□□ -0.9
CCDC43-205ENST00000592333 UBE2V1Q13404 147 aa9.46□□□□□ -0.9
CCDC43-205ENST00000592333 TRACP01848 142 aa9.45□□□□□ -0.9
CCDC43-205ENST00000592333 PSMB2P49721 201 aa9.45□□□□□ -0.9
CCDC43-205ENST00000592333 HSD52Q0P140 79 aa9.44□□□□□ -0.9
CCDC43-205ENST00000592333 HRES1P13985 223 aa9.43□□□□□ -0.9
CCDC43-205ENST00000592333 C8orf87E5RJ46 101 aa9.42□□□□□ -0.9
CCDC43-205ENST00000592333 C21orf62-AS1Q17RA5 79 aa9.42□□□□□ -0.9
CCDC43-205ENST00000592333 NOTCH2NLQ7Z3S9 236 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms