RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 SCGB1C2P0DMR2 95 aa11.15□□□□□ -0.62
DDX39A-214ENST00000590556 SMIM29Q86T20 159 aa11.15□□□□□ -0.62
DDX39A-214ENST00000590556 OCIAD2Q56VL3 154 aa11.12□□□□□ -0.63
DDX39A-214ENST00000590556 C4orf48Q5BLP8 95 aa11.12□□□□□ -0.63
DDX39A-214ENST00000590556 PPDPFLQ8WWR9 84 aa11.11□□□□□ -0.63
DDX39A-214ENST00000590556 SPAG11AQ6PDA7 123 aa11.1□□□□□ -0.63
DDX39A-214ENST00000590556 NAA38Q9BRA0 125 aaKnown RBP11.1□□□□□ -0.63
DDX39A-214ENST00000590556 DNAL4O96015 105 aa11.09□□□□□ -0.63
DDX39A-214ENST00000590556 SNHG12Q9BXW3 62 aa11.09□□□□□ -0.63
DDX39A-214ENST00000590556 F8WEM9 126 aa11.08□□□□□ -0.64
DDX39A-214ENST00000590556 GHRHP01286 108 aa11.07□□□□□ -0.64
DDX39A-214ENST00000590556 PCP4L1A6NKN8 68 aa11.05□□□□□ -0.64
DDX39A-214ENST00000590556 LST1O00453 97 aa11.05□□□□□ -0.64
DDX39A-214ENST00000590556 SPINK1P00995 79 aa11.04□□□□□ -0.64
DDX39A-214ENST00000590556 TRACP01848 142 aa11.04□□□□□ -0.64
DDX39A-214ENST00000590556 FABP2P12104 132 aa11.03□□□□□ -0.64
DDX39A-214ENST00000590556 ORMDL1Q9P0S3 153 aa11.03□□□□□ -0.64
DDX39A-214ENST00000590556 H3BUT2 72 aa11.02□□□□□ -0.65
DDX39A-214ENST00000590556 TAX1BP3O14907 124 aa11.02□□□□□ -0.65
DDX39A-214ENST00000590556 C9orf118A6NHY6 69 aa11.01□□□□□ -0.65
DDX39A-214ENST00000590556 H3BQ85 93 aa11.01□□□□□ -0.65
DDX39A-214ENST00000590556 LYRM7Q5U5X0 104 aa11.01□□□□□ -0.65
DDX39A-214ENST00000590556 NDUFV3P56181 108 aaKnown RBP11□□□□□ -0.65
DDX39A-214ENST00000590556 ATXN8Q156A1 80 aa11□□□□□ -0.65
DDX39A-214ENST00000590556 IGLV8-61A0A075B6I0 122 aa10.99□□□□□ -0.65
DDX39A-214ENST00000590556 TCL1BO95988 128 aa10.99□□□□□ -0.65
DDX39A-214ENST00000590556 HRCT1Q6UXD1 115 aa10.99□□□□□ -0.65
DDX39A-214ENST00000590556 A0A0G2JQZ4 141 aa10.98□□□□□ -0.65
DDX39A-214ENST00000590556 Q6JHZ5 121 aa10.98□□□□□ -0.65
DDX39A-214ENST00000590556 TMEM256-PLSCR3K7ERE1 68 aa10.97□□□□□ -0.65
DDX39A-214ENST00000590556 RPS29P62273 56 aaKnown RBP10.97□□□□□ -0.65
DDX39A-214ENST00000590556 COL5A1-AS1Q5SY13 56 aa10.97□□□□□ -0.65
DDX39A-214ENST00000590556 CD164Q04900 197 aa10.96□□□□□ -0.65
DDX39A-214ENST00000590556 TRBV20-1A0A075B6N2 111 aa10.95□□□□□ -0.66
DDX39A-214ENST00000590556 A0A1W2PPM0 123 aa10.94□□□□□ -0.66
DDX39A-214ENST00000590556 PRR4Q16378 134 aa10.94□□□□□ -0.66
DDX39A-214ENST00000590556 H3BMG7 143 aa10.93□□□□□ -0.66
DDX39A-214ENST00000590556 IGFL1Q6UW32 110 aa10.93□□□□□ -0.66
DDX39A-214ENST00000590556 RETNLBQ9BQ08 111 aa10.93□□□□□ -0.66
DDX39A-214ENST00000590556 HMCN2Q8NDA2 5059 aa10.92□□□□□ -0.66
DDX39A-214ENST00000590556 BAALC-AS2P0C853 105 aa10.92□□□□□ -0.66
DDX39A-214ENST00000590556 UBE2V1Q13404 147 aa10.91□□□□□ -0.66
DDX39A-214ENST00000590556 LIMD2Q9BT23 127 aa10.9□□□□□ -0.66
DDX39A-214ENST00000590556 A0A1B0GV72 72 aa10.87□□□□□ -0.67
DDX39A-214ENST00000590556 ANKRD29Q8N6D5 301 aa10.87□□□□□ -0.67
DDX39A-214ENST00000590556 C9JAW5 83 aa10.85□□□□□ -0.67
DDX39A-214ENST00000590556 TRBV7-7A0A0K0K1E9 115 aa10.83□□□□□ -0.68
DDX39A-214ENST00000590556 Q5XG85 94 aa10.83□□□□□ -0.68
DDX39A-214ENST00000590556 SPCS1Q9Y6A9 102 aa10.83□□□□□ -0.68
DDX39A-214ENST00000590556 IGLV7-46A0A075B6I9 117 aa10.82□□□□□ -0.68
DDX39A-214ENST00000590556 FP248Q71RG6 208 aaPredicted RBP10.82□□□□□ -0.68
DDX39A-214ENST00000590556 Q6Q795 121 aa10.81□□□□□ -0.68
DDX39A-214ENST00000590556 TEN1Q86WV5 123 aa10.81□□□□□ -0.68
DDX39A-214ENST00000590556 RBM3P98179 157 aaKnown RBP10.8□□□□□ -0.68
DDX39A-214ENST00000590556 A0A1W2PNM2 257 aa10.76□□□□□ -0.69
DDX39A-214ENST00000590556 DSCR8Q96T75 97 aa10.76□□□□□ -0.69
DDX39A-214ENST00000590556 JMJD7-PLA2G4BH0Y9G9 81 aa10.75□□□□□ -0.69
DDX39A-214ENST00000590556 H3BT86 120 aa10.75□□□□□ -0.69
DDX39A-214ENST00000590556 MTURNQ8N3F0 131 aa10.75□□□□□ -0.69
DDX39A-214ENST00000590556 TRBV7-4A0A0J9YYF1 115 aa10.74□□□□□ -0.69
DDX39A-214ENST00000590556 K7EP34 96 aa10.73□□□□□ -0.69
DDX39A-214ENST00000590556 CCKP06307 115 aa10.73□□□□□ -0.69
DDX39A-214ENST00000590556 C1orf195Q5TG92 126 aa10.73□□□□□ -0.69
DDX39A-214ENST00000590556 ASB16-AS1Q495Z4 193 aa10.72□□□□□ -0.69
DDX39A-214ENST00000590556 SS18L2Q9UHA2 77 aa10.72□□□□□ -0.69
DDX39A-214ENST00000590556 A0A087WSZ3 146 aa10.71□□□□□ -0.69
DDX39A-214ENST00000590556 TPRXLQ17RH7 258 aa10.7□□□□□ -0.7
DDX39A-214ENST00000590556 VPS25Q9BRG1 176 aa10.69□□□□□ -0.7
DDX39A-214ENST00000590556 GTF2H5Q6ZYL4 71 aa10.68□□□□□ -0.7
DDX39A-214ENST00000590556 OBSCN-AS1Q96MR7 158 aa10.68□□□□□ -0.7
DDX39A-214ENST00000590556 LPAP08519 4548 aa10.68□□□□□ -0.7
DDX39A-214ENST00000590556 LRP2P98164 4655 aa10.68□□□□□ -0.7
DDX39A-214ENST00000590556 LOC110117498A0A087WWA1 95 aa10.66□□□□□ -0.7
DDX39A-214ENST00000590556 PDE6GP18545 87 aa10.66□□□□□ -0.7
DDX39A-214ENST00000590556 C14orf132Q9NPU4 83 aa10.66□□□□□ -0.7
DDX39A-214ENST00000590556 KRTAP13-3Q3SY46 172 aa10.65□□□□□ -0.7
DDX39A-214ENST00000590556 Q6ZQT0 140 aa10.64□□□□□ -0.71
DDX39A-214ENST00000590556 CDIP1Q9H305 208 aa10.64□□□□□ -0.71
DDX39A-214ENST00000590556 SMCPP49901 116 aaPredicted RBP10.63□□□□□ -0.71
DDX39A-214ENST00000590556 PRO0461Q9UI25 63 aa10.63□□□□□ -0.71
DDX39A-214ENST00000590556 C21orf62-AS1Q17RA5 79 aa10.59□□□□□ -0.71
DDX39A-214ENST00000590556 Q96NJ1 140 aa10.57□□□□□ -0.72
DDX39A-214ENST00000590556 A0A1B0GW54 56 aa10.56□□□□□ -0.72
DDX39A-214ENST00000590556 C9orf92A6NGG3 77 aa10.55□□□□□ -0.72
DDX39A-214ENST00000590556 F8W1H4 67 aa10.55□□□□□ -0.72
DDX39A-214ENST00000590556 UBR4Q5T4S7 5183 aa10.55□□□□□ -0.72
DDX39A-214ENST00000590556 LINC00472Q9H8W2 130 aa10.52□□□□□ -0.73
DDX39A-214ENST00000590556 SIGMAR1Q99720 223 aa10.51□□□□□ -0.73
DDX39A-214ENST00000590556 IGKV4-1P06312 121 aa10.5□□□□□ -0.73
DDX39A-214ENST00000590556 DEFB116Q30KQ4 102 aa10.49□□□□□ -0.73
DDX39A-214ENST00000590556 XP32Q5T750 250 aa10.49□□□□□ -0.73
DDX39A-214ENST00000590556 A0A1B0GV90 55 aa10.45□□□□□ -0.74
DDX39A-214ENST00000590556 ETDBQ3ZM63 59 aa10.44□□□□□ -0.74
DDX39A-214ENST00000590556 NREPQ16612 68 aa10.43□□□□□ -0.74
DDX39A-214ENST00000590556 J3KT08 172 aa10.42□□□□□ -0.74
DDX39A-214ENST00000590556 SEC61BP60468 96 aaKnown RBP10.38□□□□□ -0.75
DDX39A-214ENST00000590556 RNF213Q63HN8 5207 aa10.37□□□□□ -0.75
DDX39A-214ENST00000590556 DSCR10P59022 87 aa10.37□□□□□ -0.75
DDX39A-214ENST00000590556 MUC17Q685J3 4493 aa10.36□□□□□ -0.75
DDX39A-214ENST00000590556 IGHV6-1A0A0B4J1U7 121 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms