RNA–Protein interactions for RNA: ENST00000590215.1

MBD1-223, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5

Gene MBD1, Length 749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-223ENST00000590215 TSTD3H0UI37 97 aa10.72□□□□□ -0.69
MBD1-223ENST00000590215 PPDPFLQ8WWR9 84 aa10.72□□□□□ -0.69
MBD1-223ENST00000590215 SNCGO76070 127 aa10.71□□□□□ -0.69
MBD1-223ENST00000590215 M0R143 59 aa10.7□□□□□ -0.7
MBD1-223ENST00000590215 PRR4Q16378 134 aa10.7□□□□□ -0.7
MBD1-223ENST00000590215 OCIAD2Q56VL3 154 aa10.69□□□□□ -0.7
MBD1-223ENST00000590215 PSMB2P49721 201 aa10.67□□□□□ -0.7
MBD1-223ENST00000590215 CD164Q04900 197 aa10.67□□□□□ -0.7
MBD1-223ENST00000590215 RETNLBQ9BQ08 111 aa10.67□□□□□ -0.7
MBD1-223ENST00000590215 COX6CP09669 75 aa10.66□□□□□ -0.7
MBD1-223ENST00000590215 UBR4Q5T4S7 5183 aa10.65□□□□□ -0.7
MBD1-223ENST00000590215 IGLV8-61A0A075B6I0 122 aa10.65□□□□□ -0.7
MBD1-223ENST00000590215 LPAP08519 4548 aa10.64□□□□□ -0.71
MBD1-223ENST00000590215 F8WEM9 126 aa10.64□□□□□ -0.71
MBD1-223ENST00000590215 CLEC2BQ92478 149 aa10.64□□□□□ -0.71
MBD1-223ENST00000590215 FP248Q71RG6 208 aaPredicted RBP10.62□□□□□ -0.71
MBD1-223ENST00000590215 GHRHP01286 108 aa10.61□□□□□ -0.71
MBD1-223ENST00000590215 SNHG12Q9BXW3 62 aa10.61□□□□□ -0.71
MBD1-223ENST00000590215 Q6JHZ5 121 aa10.6□□□□□ -0.71
MBD1-223ENST00000590215 IGLV7-46A0A075B6I9 117 aa10.59□□□□□ -0.71
MBD1-223ENST00000590215 A0A0G2JQZ4 141 aa10.59□□□□□ -0.71
MBD1-223ENST00000590215 HRCT1Q6UXD1 115 aa10.59□□□□□ -0.71
MBD1-223ENST00000590215 Q5XG85 94 aa10.58□□□□□ -0.72
MBD1-223ENST00000590215 LIMD2Q9BT23 127 aa10.58□□□□□ -0.72
MBD1-223ENST00000590215 LST1O00453 97 aa10.56□□□□□ -0.72
MBD1-223ENST00000590215 DNAL4O96015 105 aa10.56□□□□□ -0.72
MBD1-223ENST00000590215 TRACP01848 142 aa10.56□□□□□ -0.72
MBD1-223ENST00000590215 SCGB1C2P0DMR2 95 aa10.56□□□□□ -0.72
MBD1-223ENST00000590215 TPRXLQ17RH7 258 aa10.56□□□□□ -0.72
MBD1-223ENST00000590215 IGFL1Q6UW32 110 aa10.56□□□□□ -0.72
MBD1-223ENST00000590215 H3BQ85 93 aa10.55□□□□□ -0.72
MBD1-223ENST00000590215 NDUFV3P56181 108 aaKnown RBP10.55□□□□□ -0.72
MBD1-223ENST00000590215 ORMDL1Q9P0S3 153 aa10.54□□□□□ -0.72
MBD1-223ENST00000590215 H3BUT2 72 aa10.52□□□□□ -0.73
MBD1-223ENST00000590215 FABP2P12104 132 aa10.52□□□□□ -0.73
MBD1-223ENST00000590215 TMEM256-PLSCR3K7ERE1 68 aa10.5□□□□□ -0.73
MBD1-223ENST00000590215 BATFQ16520 125 aa10.5□□□□□ -0.73
MBD1-223ENST00000590215 NAA38Q9BRA0 125 aaKnown RBP10.49□□□□□ -0.73
MBD1-223ENST00000590215 H3BMG7 143 aa10.48□□□□□ -0.73
MBD1-223ENST00000590215 TRBV7-7A0A0K0K1E9 115 aa10.47□□□□□ -0.73
MBD1-223ENST00000590215 KRTAP13-3Q3SY46 172 aa10.47□□□□□ -0.73
MBD1-223ENST00000590215 Q6Q795 121 aa10.47□□□□□ -0.73
MBD1-223ENST00000590215 UBE2V1Q13404 147 aa10.46□□□□□ -0.73
MBD1-223ENST00000590215 TCL1BO95988 128 aa10.45□□□□□ -0.74
MBD1-223ENST00000590215 ATXN8Q156A1 80 aa10.44□□□□□ -0.74
MBD1-223ENST00000590215 ASB16-AS1Q495Z4 193 aa10.44□□□□□ -0.74
MBD1-223ENST00000590215 C1orf195Q5TG92 126 aa10.44□□□□□ -0.74
MBD1-223ENST00000590215 TAX1BP3O14907 124 aa10.43□□□□□ -0.74
MBD1-223ENST00000590215 LYRM7Q5U5X0 104 aa10.43□□□□□ -0.74
MBD1-223ENST00000590215 CDIP1Q9H305 208 aa10.43□□□□□ -0.74
MBD1-223ENST00000590215 TEN1Q86WV5 123 aa10.42□□□□□ -0.74
MBD1-223ENST00000590215 C9orf118A6NHY6 69 aa10.41□□□□□ -0.74
MBD1-223ENST00000590215 BAALC-AS2P0C853 105 aa10.4□□□□□ -0.74
MBD1-223ENST00000590215 RNF213Q63HN8 5207 aa10.39□□□□□ -0.75
MBD1-223ENST00000590215 TRBV20-1A0A075B6N2 111 aa10.39□□□□□ -0.75
MBD1-223ENST00000590215 A0A1W2PNM2 257 aa10.37□□□□□ -0.75
MBD1-223ENST00000590215 ANKRD29Q8N6D5 301 aa10.37□□□□□ -0.75
MBD1-223ENST00000590215 TRBV7-4A0A0J9YYF1 115 aa10.34□□□□□ -0.75
MBD1-223ENST00000590215 A0A1W2PPM0 123 aa10.34□□□□□ -0.75
MBD1-223ENST00000590215 SS18L2Q9UHA2 77 aa10.34□□□□□ -0.75
MBD1-223ENST00000590215 A0A1B0GV72 72 aa10.32□□□□□ -0.76
MBD1-223ENST00000590215 RBM3P98179 157 aaKnown RBP10.32□□□□□ -0.76
MBD1-223ENST00000590215 MUC17Q685J3 4493 aa10.32□□□□□ -0.76
MBD1-223ENST00000590215 A0A087WSZ3 146 aa10.31□□□□□ -0.76
MBD1-223ENST00000590215 COL5A1-AS1Q5SY13 56 aa10.3□□□□□ -0.76
MBD1-223ENST00000590215 XP32Q5T750 250 aa10.29□□□□□ -0.76
MBD1-223ENST00000590215 C9JAW5 83 aa10.28□□□□□ -0.76
MBD1-223ENST00000590215 CCKP06307 115 aa10.27□□□□□ -0.77
MBD1-223ENST00000590215 DSCR8Q96T75 97 aa10.27□□□□□ -0.77
MBD1-223ENST00000590215 JMJD7-PLA2G4BH0Y9G9 81 aa10.26□□□□□ -0.77
MBD1-223ENST00000590215 C9orf92A6NGG3 77 aa10.24□□□□□ -0.77
MBD1-223ENST00000590215 OBSCN-AS1Q96MR7 158 aa10.24□□□□□ -0.77
MBD1-223ENST00000590215 Q96NJ1 140 aa10.24□□□□□ -0.77
MBD1-223ENST00000590215 PCP4L1A6NKN8 68 aa10.23□□□□□ -0.77
MBD1-223ENST00000590215 H3BT86 120 aa10.22□□□□□ -0.77
MBD1-223ENST00000590215 MUC2Q02817 5179 aa10.22□□□□□ -0.77
MBD1-223ENST00000590215 LOC110117498A0A087WWA1 95 aa10.21□□□□□ -0.77
MBD1-223ENST00000590215 SPCS1Q9Y6A9 102 aa10.21□□□□□ -0.77
MBD1-223ENST00000590215 PDE6GP18545 87 aa10.19□□□□□ -0.78
MBD1-223ENST00000590215 Q6ZQT0 140 aa10.19□□□□□ -0.78
MBD1-223ENST00000590215 SEC61BP60468 96 aaKnown RBP10.18□□□□□ -0.78
MBD1-223ENST00000590215 VPS25Q9BRG1 176 aa10.18□□□□□ -0.78
MBD1-223ENST00000590215 C21orf62-AS1Q17RA5 79 aa10.17□□□□□ -0.78
MBD1-223ENST00000590215 LINC00472Q9H8W2 130 aa10.17□□□□□ -0.78
MBD1-223ENST00000590215 A0A1B0GW54 56 aa10.16□□□□□ -0.78
MBD1-223ENST00000590215 MTURNQ8N3F0 131 aa10.15□□□□□ -0.78
MBD1-223ENST00000590215 C14orf132Q9NPU4 83 aa10.15□□□□□ -0.78
MBD1-223ENST00000590215 K7EP34 96 aa10.12□□□□□ -0.79
MBD1-223ENST00000590215 SMCPP49901 116 aaPredicted RBP10.1□□□□□ -0.79
MBD1-223ENST00000590215 IGKV4-1P06312 121 aa10.09□□□□□ -0.79
MBD1-223ENST00000590215 RPL37P61927 97 aaKnown RBP10.09□□□□□ -0.79
MBD1-223ENST00000590215 PRO0461Q9UI25 63 aa10.09□□□□□ -0.79
MBD1-223ENST00000590215 SIGMAR1Q99720 223 aa10.08□□□□□ -0.8
MBD1-223ENST00000590215 DEFB116Q30KQ4 102 aa10.05□□□□□ -0.8
MBD1-223ENST00000590215 PCOTHQ58A44 107 aa10.05□□□□□ -0.8
MBD1-223ENST00000590215 KRTAP4-1Q9BYQ7 146 aa10.05□□□□□ -0.8
MBD1-223ENST00000590215 GTF2H5Q6ZYL4 71 aa10.03□□□□□ -0.8
MBD1-223ENST00000590215 Q75L30 129 aa10.03□□□□□ -0.8
MBD1-223ENST00000590215 J3KT08 172 aa10.02□□□□□ -0.81
MBD1-223ENST00000590215 DSCR10P59022 87 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 905.5 ms