RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 JMJD7-PLA2G4BH0Y9G9 81 aa10.57□□□□□ -0.72
CXXC1-212ENST00000589940 RPL37AP61513 92 aaKnown RBP10.57□□□□□ -0.72
CXXC1-212ENST00000589940 CDK2AP2O75956 126 aa10.57□□□□□ -0.72
CXXC1-212ENST00000589940 GAGE2AQ6NT46 116 aa10.57□□□□□ -0.72
CXXC1-212ENST00000589940 SPRR1BP22528 89 aa10.56□□□□□ -0.72
CXXC1-212ENST00000589940 ZNF706Q9Y5V0 76 aaPredicted RBP10.56□□□□□ -0.72
CXXC1-212ENST00000589940 C3orf22Q8N5N4 141 aa10.56□□□□□ -0.72
CXXC1-212ENST00000589940 SPRR4Q96PI1 79 aa10.56□□□□□ -0.72
CXXC1-212ENST00000589940 HSPG2P98160 4391 aa10.55□□□□□ -0.72
CXXC1-212ENST00000589940 MT-ATP8P03928 68 aa10.55□□□□□ -0.72
CXXC1-212ENST00000589940 RYR1P21817 5038 aa10.55□□□□□ -0.72
CXXC1-212ENST00000589940 SMIM29Q86T20 159 aa10.54□□□□□ -0.72
CXXC1-212ENST00000589940 RBM3P98179 157 aaKnown RBP10.53□□□□□ -0.72
CXXC1-212ENST00000589940 C14orf132Q9NPU4 83 aa10.52□□□□□ -0.73
CXXC1-212ENST00000589940 LINC00483Q53H64 154 aa10.52□□□□□ -0.73
CXXC1-212ENST00000589940 ANAPC13Q9BS18 74 aa10.49□□□□□ -0.73
CXXC1-212ENST00000589940 F8WEM9 126 aa10.49□□□□□ -0.73
CXXC1-212ENST00000589940 SS18L2Q9UHA2 77 aa10.49□□□□□ -0.73
CXXC1-212ENST00000589940 DSCR8Q96T75 97 aa10.48□□□□□ -0.73
CXXC1-212ENST00000589940 KRTAP10-4P60372 401 aaPredicted RBP10.48□□□□□ -0.73
CXXC1-212ENST00000589940 KIAA1109Q2LD37 5005 aa10.46□□□□□ -0.73
CXXC1-212ENST00000589940 LOC110117498A0A087WWA1 95 aa10.46□□□□□ -0.74
CXXC1-212ENST00000589940 TRBV7-4A0A0J9YYF1 115 aa10.46□□□□□ -0.74
CXXC1-212ENST00000589940 SPINK6Q6UWN8 80 aa10.46□□□□□ -0.74
CXXC1-212ENST00000589940 FAM229AH3BQW9 127 aa10.45□□□□□ -0.74
CXXC1-212ENST00000589940 ANAPC11Q9NYG5 84 aa10.45□□□□□ -0.74
CXXC1-212ENST00000589940 PDE6GP18545 87 aa10.44□□□□□ -0.74
CXXC1-212ENST00000589940 IGLV8-61A0A075B6I0 122 aa10.43□□□□□ -0.74
CXXC1-212ENST00000589940 Q6ZQT0 140 aa10.43□□□□□ -0.74
CXXC1-212ENST00000589940 PLA2G1BP04054 148 aaKnown RBP10.43□□□□□ -0.74
CXXC1-212ENST00000589940 CCKP06307 115 aa10.41□□□□□ -0.74
CXXC1-212ENST00000589940 IGLV9-49A0A0B4J1Y8 123 aa10.4□□□□□ -0.74
CXXC1-212ENST00000589940 KRTAP1-4P0C5Y4 121 aa10.39□□□□□ -0.75
CXXC1-212ENST00000589940 Q5VSD8 79 aa10.39□□□□□ -0.75
CXXC1-212ENST00000589940 PKHD1L1Q86WI1 4243 aa10.38□□□□□ -0.75
CXXC1-212ENST00000589940 FAM229BQ4G0N7 80 aa10.38□□□□□ -0.75
CXXC1-212ENST00000589940 C9orf153Q5TBE3 101 aa10.38□□□□□ -0.75
CXXC1-212ENST00000589940 Q6JHZ5 121 aa10.38□□□□□ -0.75
CXXC1-212ENST00000589940 IGFL1Q6UW32 110 aa10.37□□□□□ -0.75
CXXC1-212ENST00000589940 FAM240AA0A1B0GVK7 77 aa10.37□□□□□ -0.75
CXXC1-212ENST00000589940 MOBPQ13875 183 aa10.35□□□□□ -0.75
CXXC1-212ENST00000589940 Q8NBF4 154 aa10.35□□□□□ -0.75
CXXC1-212ENST00000589940 ACYP1P07311 99 aa10.34□□□□□ -0.75
CXXC1-212ENST00000589940 A0A087X002 238 aa10.34□□□□□ -0.75
CXXC1-212ENST00000589940 A0A0G2JQZ4 141 aa10.34□□□□□ -0.75
CXXC1-212ENST00000589940 A0A1W2PNM2 257 aa10.33□□□□□ -0.76
CXXC1-212ENST00000589940 CRYGAP11844 174 aa10.32□□□□□ -0.76
CXXC1-212ENST00000589940 Q8N1X5 172 aa10.32□□□□□ -0.76
CXXC1-212ENST00000589940 KRTAP17-1Q9BYP8 105 aa10.31□□□□□ -0.76
CXXC1-212ENST00000589940 CCDC179H3BU77 68 aa10.31□□□□□ -0.76
CXXC1-212ENST00000589940 Q6Q795 121 aa10.31□□□□□ -0.76
CXXC1-212ENST00000589940 KRTAP13-2Q52LG2 175 aa10.3□□□□□ -0.76
CXXC1-212ENST00000589940 BIRC6Q9NR09 4857 aa10.29□□□□□ -0.76
CXXC1-212ENST00000589940 SMIM20Q8N5G0 67 aa10.29□□□□□ -0.76
CXXC1-212ENST00000589940 SSBP3-AS1Q7Z2R9 100 aa10.28□□□□□ -0.76
CXXC1-212ENST00000589940 LINC00846Q9NV44 126 aa10.28□□□□□ -0.76
CXXC1-212ENST00000589940 A0A1B0GW54 56 aa10.27□□□□□ -0.76
CXXC1-212ENST00000589940 PRR26Q8N8Z3 221 aa10.22□□□□□ -0.77
CXXC1-212ENST00000589940 TYMSOSQ8TAI1 123 aa10.21□□□□□ -0.77
CXXC1-212ENST00000589940 UBL5Q9BZL1 73 aa10.21□□□□□ -0.77
CXXC1-212ENST00000589940 A0A087WSZ3 146 aa10.2□□□□□ -0.78
CXXC1-212ENST00000589940 TRBV7-7A0A0K0K1E9 115 aa10.2□□□□□ -0.78
CXXC1-212ENST00000589940 HRCT1Q6UXD1 115 aa10.2□□□□□ -0.78
CXXC1-212ENST00000589940 CD164Q04900 197 aa10.19□□□□□ -0.78
CXXC1-212ENST00000589940 Q6ZVQ6 151 aa10.18□□□□□ -0.78
CXXC1-212ENST00000589940 NREPQ16612 68 aa10.16□□□□□ -0.78
CXXC1-212ENST00000589940 LRP1Q07954 4544 aaKnown RBP10.16□□□□□ -0.78
CXXC1-212ENST00000589940 LINC00643Q86TS7 51 aa10.15□□□□□ -0.78
CXXC1-212ENST00000589940 FAT3Q8TDW7 4589 aa10.15□□□□□ -0.78
CXXC1-212ENST00000589940 HERC2O95714 4834 aa10.14□□□□□ -0.79
CXXC1-212ENST00000589940 MYCBP2O75592 4640 aa10.11□□□□□ -0.79
CXXC1-212ENST00000589940 TNXBP22105 4242 aa10.11□□□□□ -0.79
CXXC1-212ENST00000589940 C4orf48Q5BLP8 95 aa10.1□□□□□ -0.79
CXXC1-212ENST00000589940 FLG2Q5D862 2391 aaPredicted RBP10.1□□□□□ -0.79
CXXC1-212ENST00000589940 LINC00304Q8N9R0 145 aa10.1□□□□□ -0.79
CXXC1-212ENST00000589940 KRTAP4-5Q9BYR2 181 aa10.09□□□□□ -0.79
CXXC1-212ENST00000589940 SPINK1P00995 79 aa10.07□□□□□ -0.8
CXXC1-212ENST00000589940 ATP5EP2Q5VTU8 51 aa10.07□□□□□ -0.8
CXXC1-212ENST00000589940 SPAG11AQ6PDA7 123 aa10.07□□□□□ -0.8
CXXC1-212ENST00000589940 KRTAP10-8P60410 259 aa10.06□□□□□ -0.8
CXXC1-212ENST00000589940 IGKV3D-7A0A0C4DH55 119 aa10.05□□□□□ -0.8
CXXC1-212ENST00000589940 Q5XG85 94 aa10.05□□□□□ -0.8
CXXC1-212ENST00000589940 IMUPQ9GZP8 106 aa10.05□□□□□ -0.8
CXXC1-212ENST00000589940 LINC00472Q9H8W2 130 aa10.05□□□□□ -0.8
CXXC1-212ENST00000589940 BPY2O14599 106 aa10.05□□□□□ -0.8
CXXC1-212ENST00000589940 CXCL6P80162 114 aa10.05□□□□□ -0.8
CXXC1-212ENST00000589940 FAM236AA0A1B0GUQ0 79 aa10.04□□□□□ -0.8
CXXC1-212ENST00000589940 FAM236BA0A1B0GV22 79 aa10.04□□□□□ -0.8
CXXC1-212ENST00000589940 LIMD2Q9BT23 127 aa10.04□□□□□ -0.8
CXXC1-212ENST00000589940 ABCA13Q86UQ4 5058 aa10.03□□□□□ -0.8
CXXC1-212ENST00000589940 RPS29P62273 56 aaKnown RBP10.02□□□□□ -0.81
CXXC1-212ENST00000589940 DEFB116Q30KQ4 102 aa10.02□□□□□ -0.81
CXXC1-212ENST00000589940 ASB16-AS1Q495Z4 193 aa10.02□□□□□ -0.81
CXXC1-212ENST00000589940 Q96NJ1 140 aa10.02□□□□□ -0.81
CXXC1-212ENST00000589940 UQCRQO14949 82 aa9.99□□□□□ -0.81
CXXC1-212ENST00000589940 J3KT08 172 aa9.98□□□□□ -0.81
CXXC1-212ENST00000589940 OXTP01178 125 aa9.98□□□□□ -0.81
CXXC1-212ENST00000589940 DSCR10P59022 87 aa9.97□□□□□ -0.81
CXXC1-212ENST00000589940 MT1HL1P0DM35 61 aa9.96□□□□□ -0.82
CXXC1-212ENST00000589940 IGKV4-1P06312 121 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms