RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 LINC00472Q9H8W2 130 aa3.39□□□□□ -1.87
LINC01538-201ENST00000588074 ACYP2P14621 99 aa3.39□□□□□ -1.87
LINC01538-201ENST00000588074 ADGRG4Q8IZF6 3080 aa3.38□□□□□ -1.87
LINC01538-201ENST00000588074 HTN1P15515 57 aa3.38□□□□□ -1.87
LINC01538-201ENST00000588074 RP1L1Q8IWN7 2480 aaPredicted RBP3.38□□□□□ -1.87
LINC01538-201ENST00000588074 ZNF462Q96JM2 2506 aa3.38□□□□□ -1.87
LINC01538-201ENST00000588074 IGKV2-24A0A0C4DH68 120 aa3.38□□□□□ -1.87
LINC01538-201ENST00000588074 Q5W150 140 aa3.38□□□□□ -1.87
LINC01538-201ENST00000588074 CFAP46Q8IYW2 2715 aa3.37□□□□□ -1.87
LINC01538-201ENST00000588074 CHD6Q8TD26 2715 aa3.37□□□□□ -1.87
LINC01538-201ENST00000588074 CSMD2Q7Z408 3487 aa3.36□□□□□ -1.87
LINC01538-201ENST00000588074 CSMD1Q96PZ7 3565 aa3.36□□□□□ -1.87
LINC01538-201ENST00000588074 C5orf56Q8N8D9 126 aa3.35□□□□□ -1.87
LINC01538-201ENST00000588074 ABCA4P78363 2273 aa3.35□□□□□ -1.87
LINC01538-201ENST00000588074 KMT2BQ9UMN6 2715 aaPredicted RBP3.35□□□□□ -1.87
LINC01538-201ENST00000588074 ICE1Q9Y2F5 2266 aa3.35□□□□□ -1.87
LINC01538-201ENST00000588074 WNK2Q9Y3S1 2297 aa3.35□□□□□ -1.87
LINC01538-201ENST00000588074 ANGP03950 147 aaKnown RBP3.35□□□□□ -1.87
LINC01538-201ENST00000588074 IGLV7-43P04211 117 aa3.34□□□□□ -1.87
LINC01538-201ENST00000588074 FAM208BQ5VWN6 2430 aa3.34□□□□□ -1.87
LINC01538-201ENST00000588074 LYNX1G3V0Z9 82 aa3.34□□□□□ -1.87
LINC01538-201ENST00000588074 DEFB105AQ8NG35 78 aa3.34□□□□□ -1.87
LINC01538-201ENST00000588074 C6orf48Q9UBA6 75 aa3.34□□□□□ -1.87
LINC01538-201ENST00000588074 A0A087WTM6 91 aa3.33□□□□□ -1.88
LINC01538-201ENST00000588074 J3QKU1 62 aa3.33□□□□□ -1.88
LINC01538-201ENST00000588074 SPINT4Q6UDR6 99 aa3.33□□□□□ -1.88
LINC01538-201ENST00000588074 UNQ6190/PRO20217Q6UXQ8 127 aa3.33□□□□□ -1.88
LINC01538-201ENST00000588074 SPTBN1Q01082 2364 aaKnown RBP3.33□□□□□ -1.88
LINC01538-201ENST00000588074 MMP24-AS1A0A0U1RRL7 71 aa3.32□□□□□ -1.88
LINC01538-201ENST00000588074 ALMS1Q8TCU4 4167 aa3.32□□□□□ -1.88
LINC01538-201ENST00000588074 LINC00304Q8N9R0 145 aa3.32□□□□□ -1.88
LINC01538-201ENST00000588074 CCL19Q99731 98 aa3.32□□□□□ -1.88
LINC01538-201ENST00000588074 NBPF19A0A087WUL8 3843 aa3.31□□□□□ -1.88
LINC01538-201ENST00000588074 UTP20O75691 2785 aaKnown RBP3.31□□□□□ -1.88
LINC01538-201ENST00000588074 PCNX1Q96RV3 2341 aa3.31□□□□□ -1.88
LINC01538-201ENST00000588074 MYO18BQ8IUG5 2567 aa3.31□□□□□ -1.88
LINC01538-201ENST00000588074 SPTAN1Q13813 2472 aaKnown RBP3.31□□□□□ -1.88
LINC01538-201ENST00000588074 FLNCQ14315 2725 aa3.3□□□□□ -1.88
LINC01538-201ENST00000588074 DEFB131AP59861 70 aa3.3□□□□□ -1.88
LINC01538-201ENST00000588074 CLPSL2Q6UWE3 100 aa3.3□□□□□ -1.88
LINC01538-201ENST00000588074 TENM4Q6N022 2769 aa3.3□□□□□ -1.88
LINC01538-201ENST00000588074 USP9XQ93008 2570 aaPredicted RBP3.3□□□□□ -1.88
LINC01538-201ENST00000588074 RPL37AP61513 92 aaKnown RBP3.3□□□□□ -1.88
LINC01538-201ENST00000588074 Q6ZRX8 168 aa3.3□□□□□ -1.88
LINC01538-201ENST00000588074 FASNP49327 2511 aaKnown RBP3.29□□□□□ -1.88
LINC01538-201ENST00000588074 HIVEP3Q5T1R4 2406 aa3.29□□□□□ -1.88
LINC01538-201ENST00000588074 SVEP1Q4LDE5 3571 aa3.29□□□□□ -1.88
LINC01538-201ENST00000588074 PANO1I0J062 215 aa3.29□□□□□ -1.88
LINC01538-201ENST00000588074 LRRK2Q5S007 2527 aa3.28□□□□□ -1.88
LINC01538-201ENST00000588074 CRYBG3Q68DQ2 2970 aa3.28□□□□□ -1.88
LINC01538-201ENST00000588074 ANKRD17O75179 2603 aaKnown RBP3.28□□□□□ -1.88
LINC01538-201ENST00000588074 IGFL1Q6UW32 110 aa3.28□□□□□ -1.88
LINC01538-201ENST00000588074 GCN1Q92616 2671 aaKnown RBP3.28□□□□□ -1.88
LINC01538-201ENST00000588074 VPS13CQ709C8 3753 aa3.28□□□□□ -1.88
LINC01538-201ENST00000588074 HELZ2Q9BYK8 2649 aaKnown RBP3.28□□□□□ -1.88
LINC01538-201ENST00000588074 UBR5O95071 2799 aaPredicted RBP3.28□□□□□ -1.88
LINC01538-201ENST00000588074 WNK1Q9H4A3 2382 aa3.27□□□□□ -1.89
LINC01538-201ENST00000588074 DCHS2Q6V1P9 2916 aa3.27□□□□□ -1.89
LINC01538-201ENST00000588074 KRTAP10-9P60411 292 aa3.27□□□□□ -1.89
LINC01538-201ENST00000588074 HECTD1Q9ULT8 2610 aa3.27□□□□□ -1.89
LINC01538-201ENST00000588074 KRTAP11-1Q8IUC1 163 aa3.27□□□□□ -1.89
LINC01538-201ENST00000588074 MAPK1IP1LQ8NDC0 245 aa3.27□□□□□ -1.89
LINC01538-201ENST00000588074 FBN2P35556 2912 aa3.26□□□□□ -1.89
LINC01538-201ENST00000588074 Q96NJ1 140 aa3.26□□□□□ -1.89
LINC01538-201ENST00000588074 LRBAP50851 2863 aa3.26□□□□□ -1.89
LINC01538-201ENST00000588074 DOPEY1Q5JWR5 2465 aa3.26□□□□□ -1.89
LINC01538-201ENST00000588074 ROS1P08922 2347 aa3.26□□□□□ -1.89
LINC01538-201ENST00000588074 SPRR1AP35321 89 aa3.25□□□□□ -1.89
LINC01538-201ENST00000588074 CELSR2Q9HCU4 2923 aa3.25□□□□□ -1.89
LINC01538-201ENST00000588074 LYNX1P0DP58 116 aa3.25□□□□□ -1.89
LINC01538-201ENST00000588074 USP9YO00507 2555 aaPredicted RBP3.25□□□□□ -1.89
LINC01538-201ENST00000588074 AKAP6Q13023 2319 aa3.25□□□□□ -1.89
LINC01538-201ENST00000588074 ANKHD1Q8IWZ3 2542 aaKnown RBP3.24□□□□□ -1.89
LINC01538-201ENST00000588074 PKDREJQ9NTG1 2253 aa3.24□□□□□ -1.89
LINC01538-201ENST00000588074 ANAPC11Q9NYG5 84 aa3.24□□□□□ -1.89
LINC01538-201ENST00000588074 POLQO75417 2590 aa3.24□□□□□ -1.89
LINC01538-201ENST00000588074 LY6G6CO95867 125 aa3.24□□□□□ -1.89
LINC01538-201ENST00000588074 SSBP3-AS1Q7Z2R9 100 aa3.24□□□□□ -1.89
LINC01538-201ENST00000588074 KRTAP9-3Q9BYQ3 159 aa3.24□□□□□ -1.89
LINC01538-201ENST00000588074 NOP10Q9NPE3 64 aaKnown RBP3.24□□□□□ -1.89
LINC01538-201ENST00000588074 TACC2O95359 2948 aa3.24□□□□□ -1.89
LINC01538-201ENST00000588074 CENPEQ02224 2701 aa3.23□□□□□ -1.89
LINC01538-201ENST00000588074 HRNRQ86YZ3 2850 aaPredicted RBP3.23□□□□□ -1.89
LINC01538-201ENST00000588074 NBDYA0A0U1RRE5 68 aa3.23□□□□□ -1.89
LINC01538-201ENST00000588074 ASH1LQ9NR48 2969 aaKnown RBP3.22□□□□□ -1.89
LINC01538-201ENST00000588074 NOTCH2Q04721 2471 aa3.22□□□□□ -1.89
LINC01538-201ENST00000588074 KRTAP1-1Q07627 177 aa3.22□□□□□ -1.89
LINC01538-201ENST00000588074 ABCA12Q86UK0 2595 aa3.22□□□□□ -1.89
LINC01538-201ENST00000588074 SPG11Q96JI7 2443 aa3.22□□□□□ -1.89
LINC01538-201ENST00000588074 FLNBO75369 2602 aaKnown RBP3.22□□□□□ -1.89
LINC01538-201ENST00000588074 PTPN13Q12923 2485 aa3.22□□□□□ -1.89
LINC01538-201ENST00000588074 MRPL34Q9BQ48 92 aaKnown RBP3.21□□□□□ -1.9
LINC01538-201ENST00000588074 ZNF469Q96JG9 3925 aaPredicted RBP3.21□□□□□ -1.9
LINC01538-201ENST00000588074 BAHCC1Q9P281 2608 aa3.21□□□□□ -1.9
LINC01538-201ENST00000588074 CELSR1Q9NYQ6 3014 aa3.2□□□□□ -1.9
LINC01538-201ENST00000588074 BRD3OSQ6XYD6 125 aa3.2□□□□□ -1.9
LINC01538-201ENST00000588074 PSORS1C2Q9UIG4 136 aa3.2□□□□□ -1.9
LINC01538-201ENST00000588074 MAP1AP78559 2803 aaPredicted RBP3.19□□□□□ -1.9
LINC01538-201ENST00000588074 UNC79Q9P2D8 2635 aa3.19□□□□□ -1.9
LINC01538-201ENST00000588074 CCDC168Q8NDH2 2452 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms