RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 PSORS1C2Q9UIG4 136 aa12.55□□□□□ -0.4
ATG4D-204ENST00000586417 SIGMAR1Q99720 223 aa12.53□□□□□ -0.4
ATG4D-204ENST00000586417 PDE6GP18545 87 aa12.52□□□□□ -0.41
ATG4D-204ENST00000586417 SMIM29Q86T20 159 aa12.52□□□□□ -0.41
ATG4D-204ENST00000586417 MT-ATP8P03928 68 aa12.51□□□□□ -0.41
ATG4D-204ENST00000586417 LINC00846Q9NV44 126 aa12.5□□□□□ -0.41
ATG4D-204ENST00000586417 SRRM2Q9UQ35 2752 aaKnown RBP12.49□□□□□ -0.41
ATG4D-204ENST00000586417 SMR3BP02814 79 aaPredicted RBP12.47□□□□□ -0.41
ATG4D-204ENST00000586417 C1orf137Q5JT78 98 aa12.47□□□□□ -0.41
ATG4D-204ENST00000586417 SPRR1BP22528 89 aa12.46□□□□□ -0.41
ATG4D-204ENST00000586417 KIAA1109Q2LD37 5005 aa12.46□□□□□ -0.41
ATG4D-204ENST00000586417 HSPG2P98160 4391 aa12.45□□□□□ -0.42
ATG4D-204ENST00000586417 CDK2AP2O75956 126 aa12.44□□□□□ -0.42
ATG4D-204ENST00000586417 VPS13BQ7Z7G8 4022 aa12.43□□□□□ -0.42
ATG4D-204ENST00000586417 LINC00643Q86TS7 51 aa12.43□□□□□ -0.42
ATG4D-204ENST00000586417 RYR1P21817 5038 aa12.42□□□□□ -0.42
ATG4D-204ENST00000586417 ZNF861PO60384 105 aa12.41□□□□□ -0.42
ATG4D-204ENST00000586417 C21orf62-AS1Q17RA5 79 aa12.41□□□□□ -0.42
ATG4D-204ENST00000586417 FAT1Q14517 4588 aa12.39□□□□□ -0.43
ATG4D-204ENST00000586417 IGLV8-61A0A075B6I0 122 aa12.38□□□□□ -0.43
ATG4D-204ENST00000586417 IGLV7-43P04211 117 aa12.38□□□□□ -0.43
ATG4D-204ENST00000586417 F8WEM9 126 aa12.38□□□□□ -0.43
ATG4D-204ENST00000586417 SPRR4Q96PI1 79 aa12.38□□□□□ -0.43
ATG4D-204ENST00000586417 KRTAP17-1Q9BYP8 105 aa12.37□□□□□ -0.43
ATG4D-204ENST00000586417 A0A1W2PNM2 257 aa12.36□□□□□ -0.43
ATG4D-204ENST00000586417 BIRC6Q9NR09 4857 aa12.34□□□□□ -0.43
ATG4D-204ENST00000586417 LINC00483Q53H64 154 aa12.34□□□□□ -0.43
ATG4D-204ENST00000586417 UBL5Q9BZL1 73 aa12.33□□□□□ -0.44
ATG4D-204ENST00000586417 TRBV7-7A0A0K0K1E9 115 aa12.33□□□□□ -0.44
ATG4D-204ENST00000586417 IGFL1Q6UW32 110 aa12.33□□□□□ -0.44
ATG4D-204ENST00000586417 Q8NBF4 154 aa12.33□□□□□ -0.44
ATG4D-204ENST00000586417 Q6JHZ5 121 aa12.32□□□□□ -0.44
ATG4D-204ENST00000586417 ZNF706Q9Y5V0 76 aaPredicted RBP12.32□□□□□ -0.44
ATG4D-204ENST00000586417 Q6ZVQ6 151 aa12.3□□□□□ -0.44
ATG4D-204ENST00000586417 A0A0G2JQZ4 141 aa12.3□□□□□ -0.44
ATG4D-204ENST00000586417 RPL37AP61513 92 aaKnown RBP12.29□□□□□ -0.44
ATG4D-204ENST00000586417 Q6Q795 121 aa12.28□□□□□ -0.44
ATG4D-204ENST00000586417 A0A1B0GW54 56 aa12.28□□□□□ -0.44
ATG4D-204ENST00000586417 SCGB1A1P11684 91 aa12.28□□□□□ -0.44
ATG4D-204ENST00000586417 KRTAP10-4P60372 401 aaPredicted RBP12.28□□□□□ -0.44
ATG4D-204ENST00000586417 IGKV3D-7A0A0C4DH55 119 aa12.26□□□□□ -0.45
ATG4D-204ENST00000586417 IMUPQ9GZP8 106 aa12.25□□□□□ -0.45
ATG4D-204ENST00000586417 CRYGAP11844 174 aa12.25□□□□□ -0.45
ATG4D-204ENST00000586417 Q5VSD8 79 aa12.24□□□□□ -0.45
ATG4D-204ENST00000586417 ATP5EP2Q5VTU8 51 aa12.24□□□□□ -0.45
ATG4D-204ENST00000586417 FAM229AH3BQW9 127 aa12.23□□□□□ -0.45
ATG4D-204ENST00000586417 ANAPC11Q9NYG5 84 aa12.23□□□□□ -0.45
ATG4D-204ENST00000586417 Q8N1X5 172 aa12.21□□□□□ -0.45
ATG4D-204ENST00000586417 IGLV9-49A0A0B4J1Y8 123 aa12.2□□□□□ -0.46
ATG4D-204ENST00000586417 NREPQ16612 68 aa12.18□□□□□ -0.46
ATG4D-204ENST00000586417 PLA2G1BP04054 148 aaKnown RBP12.18□□□□□ -0.46
ATG4D-204ENST00000586417 C9orf153Q5TBE3 101 aa12.17□□□□□ -0.46
ATG4D-204ENST00000586417 PCP4P48539 62 aa12.15□□□□□ -0.46
ATG4D-204ENST00000586417 CXCL6P80162 114 aa12.15□□□□□ -0.46
ATG4D-204ENST00000586417 MOBPQ13875 183 aa12.14□□□□□ -0.47
ATG4D-204ENST00000586417 KRTAP4-5Q9BYR2 181 aa12.13□□□□□ -0.47
ATG4D-204ENST00000586417 A0A087WSZ3 146 aa12.13□□□□□ -0.47
ATG4D-204ENST00000586417 HERC2O95714 4834 aa12.11□□□□□ -0.47
ATG4D-204ENST00000586417 PKHD1L1Q86WI1 4243 aa12.11□□□□□ -0.47
ATG4D-204ENST00000586417 A0A087WVE0 104 aa12.1□□□□□ -0.47
ATG4D-204ENST00000586417 HIST1H4AP62805 103 aaKnown RBP12.09□□□□□ -0.47
ATG4D-204ENST00000586417 SPINK6Q6UWN8 80 aa12.09□□□□□ -0.47
ATG4D-204ENST00000586417 FAM236AA0A1B0GUQ0 79 aa12.08□□□□□ -0.48
ATG4D-204ENST00000586417 FAM236BA0A1B0GV22 79 aa12.08□□□□□ -0.48
ATG4D-204ENST00000586417 BPY2O14599 106 aa12.07□□□□□ -0.48
ATG4D-204ENST00000586417 KRTAP1-4P0C5Y4 121 aa12.07□□□□□ -0.48
ATG4D-204ENST00000586417 A0A087X002 238 aa12.05□□□□□ -0.48
ATG4D-204ENST00000586417 FAM229BQ4G0N7 80 aa12.04□□□□□ -0.48
ATG4D-204ENST00000586417 FLG2Q5D862 2391 aaPredicted RBP12.02□□□□□ -0.49
ATG4D-204ENST00000586417 KRTAP13-2Q52LG2 175 aa12.02□□□□□ -0.49
ATG4D-204ENST00000586417 Q8N9L7 120 aa12.01□□□□□ -0.49
ATG4D-204ENST00000586417 HRCT1Q6UXD1 115 aa12□□□□□ -0.49
ATG4D-204ENST00000586417 SSBP3-AS1Q7Z2R9 100 aa12□□□□□ -0.49
ATG4D-204ENST00000586417 IGKV4-1P06312 121 aa12□□□□□ -0.49
ATG4D-204ENST00000586417 DSCR10P59022 87 aa11.99□□□□□ -0.49
ATG4D-204ENST00000586417 LINC00472Q9H8W2 130 aa11.97□□□□□ -0.49
ATG4D-204ENST00000586417 ABCA13Q86UQ4 5058 aa11.97□□□□□ -0.49
ATG4D-204ENST00000586417 DEFB116Q30KQ4 102 aa11.96□□□□□ -0.49
ATG4D-204ENST00000586417 MYCBP2O75592 4640 aa11.95□□□□□ -0.5
ATG4D-204ENST00000586417 ANAPC13Q9BS18 74 aa11.95□□□□□ -0.5
ATG4D-204ENST00000586417 LRP1Q07954 4544 aaKnown RBP11.95□□□□□ -0.5
ATG4D-204ENST00000586417 CD164Q04900 197 aa11.93□□□□□ -0.5
ATG4D-204ENST00000586417 Q96NJ1 140 aa11.92□□□□□ -0.5
ATG4D-204ENST00000586417 SS18L2Q9UHA2 77 aa11.92□□□□□ -0.5
ATG4D-204ENST00000586417 K7EQZ3 153 aa11.91□□□□□ -0.5
ATG4D-204ENST00000586417 ATOX1O00244 68 aa11.9□□□□□ -0.5
ATG4D-204ENST00000586417 FAT3Q8TDW7 4589 aa11.87□□□□□ -0.51
ATG4D-204ENST00000586417 PRR26Q8N8Z3 221 aa11.87□□□□□ -0.51
ATG4D-204ENST00000586417 J3KT08 172 aa11.84□□□□□ -0.51
ATG4D-204ENST00000586417 A8MWP4 228 aa11.82□□□□□ -0.52
ATG4D-204ENST00000586417 TYMSOSQ8TAI1 123 aa11.82□□□□□ -0.52
ATG4D-204ENST00000586417 PCLOQ9Y6V0 5065 aa11.8□□□□□ -0.52
ATG4D-204ENST00000586417 PRR15Q8IV56 129 aa11.8□□□□□ -0.52
ATG4D-204ENST00000586417 ASB16-AS1Q495Z4 193 aa11.79□□□□□ -0.52
ATG4D-204ENST00000586417 TNXBP22105 4242 aa11.79□□□□□ -0.52
ATG4D-204ENST00000586417 Q5XG85 94 aa11.77□□□□□ -0.52
ATG4D-204ENST00000586417 SERP2Q8N6R1 65 aa11.76□□□□□ -0.53
ATG4D-204ENST00000586417 HCG22E2RYF7 251 aa11.75□□□□□ -0.53
ATG4D-204ENST00000586417 CCDC179H3BU77 68 aa11.75□□□□□ -0.53
ATG4D-204ENST00000586417 COX7CP15954 63 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms