RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 SPRR1AP35321 89 aa7.8□□□□□ -1.16
SMARCA4-208ENST00000585799 DNHD1Q96M86 4753 aa7.8□□□□□ -1.16
SMARCA4-208ENST00000585799 KRTAP11-1Q8IUC1 163 aa7.79□□□□□ -1.16
SMARCA4-208ENST00000585799 IGKV4-1P06312 121 aa7.78□□□□□ -1.16
SMARCA4-208ENST00000585799 PSORS1C2Q9UIG4 136 aa7.78□□□□□ -1.16
SMARCA4-208ENST00000585799 K7EQZ3 153 aa7.78□□□□□ -1.16
SMARCA4-208ENST00000585799 IGLV5-48A0A075B6I7 105 aa7.77□□□□□ -1.17
SMARCA4-208ENST00000585799 ZNF706Q9Y5V0 76 aaPredicted RBP7.77□□□□□ -1.17
SMARCA4-208ENST00000585799 KRTAP4-16G5E9R7 235 aaPredicted RBP7.76□□□□□ -1.17
SMARCA4-208ENST00000585799 FAM236DA0A1B0GTK5 79 aa7.75□□□□□ -1.17
SMARCA4-208ENST00000585799 FAM236CP0DP71 79 aa7.75□□□□□ -1.17
SMARCA4-208ENST00000585799 MP68P56378 58 aa7.75□□□□□ -1.17
SMARCA4-208ENST00000585799 IGHV6-1A0A0B4J1U7 121 aa7.74□□□□□ -1.17
SMARCA4-208ENST00000585799 J3KT08 172 aa7.73□□□□□ -1.17
SMARCA4-208ENST00000585799 CRYGAP11844 174 aa7.73□□□□□ -1.17
SMARCA4-208ENST00000585799 TMEM254Q8TBM7 123 aa7.73□□□□□ -1.17
SMARCA4-208ENST00000585799 HCG22E2RYF7 251 aa7.72□□□□□ -1.17
SMARCA4-208ENST00000585799 TMEM258P61165 79 aa7.72□□□□□ -1.17
SMARCA4-208ENST00000585799 CASC2Q6XLA1 102 aa7.71□□□□□ -1.17
SMARCA4-208ENST00000585799 SPACA4Q8TDM5 124 aa7.71□□□□□ -1.17
SMARCA4-208ENST00000585799 C4orf48Q5BLP8 95 aa7.71□□□□□ -1.18
SMARCA4-208ENST00000585799 Q6ZRN7 208 aaPredicted RBP7.7□□□□□ -1.18
SMARCA4-208ENST00000585799 LINC00208Q96KT6 92 aa7.7□□□□□ -1.18
SMARCA4-208ENST00000585799 CYSTM1Q9H1C7 97 aa7.7□□□□□ -1.18
SMARCA4-208ENST00000585799 ZNF861PO60384 105 aa7.68□□□□□ -1.18
SMARCA4-208ENST00000585799 SPRR4Q96PI1 79 aa7.67□□□□□ -1.18
SMARCA4-208ENST00000585799 SRRM2Q9UQ35 2752 aaKnown RBP7.67□□□□□ -1.18
SMARCA4-208ENST00000585799 CSMD3Q7Z407 3707 aa7.66□□□□□ -1.18
SMARCA4-208ENST00000585799 KRTAP10-2P60368 255 aa7.66□□□□□ -1.18
SMARCA4-208ENST00000585799 DSCR10P59022 87 aa7.65□□□□□ -1.19
SMARCA4-208ENST00000585799 SMR3BP02814 79 aaPredicted RBP7.64□□□□□ -1.19
SMARCA4-208ENST00000585799 Q6ZR54 194 aa7.64□□□□□ -1.19
SMARCA4-208ENST00000585799 A0A1B0GW54 56 aa7.64□□□□□ -1.19
SMARCA4-208ENST00000585799 RETNLBQ9BQ08 111 aa7.64□□□□□ -1.19
SMARCA4-208ENST00000585799 COL7A1Q02388 2944 aa7.64□□□□□ -1.19
SMARCA4-208ENST00000585799 FBN3Q75N90 2809 aa7.63□□□□□ -1.19
SMARCA4-208ENST00000585799 MEGF8Q7Z7M0 2845 aa7.63□□□□□ -1.19
SMARCA4-208ENST00000585799 KRTAP21-3Q3LHN1 58 aa7.63□□□□□ -1.19
SMARCA4-208ENST00000585799 IGLV7-43P04211 117 aa7.62□□□□□ -1.19
SMARCA4-208ENST00000585799 MPLKIPQ8TAP9 179 aa7.62□□□□□ -1.19
SMARCA4-208ENST00000585799 HUWE1Q7Z6Z7 4374 aaKnown RBP7.62□□□□□ -1.19
SMARCA4-208ENST00000585799 H0Y9P7 68 aa7.6□□□□□ -1.19
SMARCA4-208ENST00000585799 PCOTHQ58A44 107 aa7.6□□□□□ -1.19
SMARCA4-208ENST00000585799 NDUFC1O43677 76 aa7.59□□□□□ -1.19
SMARCA4-208ENST00000585799 hDV103S1A0JD37 113 aa7.58□□□□□ -1.2
SMARCA4-208ENST00000585799 PLAC8Q9NZF1 115 aa7.58□□□□□ -1.2
SMARCA4-208ENST00000585799 A8MWP4 228 aa7.58□□□□□ -1.2
SMARCA4-208ENST00000585799 PRR15Q8IV56 129 aa7.57□□□□□ -1.2
SMARCA4-208ENST00000585799 KRTAP10-1P60331 282 aa7.56□□□□□ -1.2
SMARCA4-208ENST00000585799 H7BZZ5 65 aa7.55□□□□□ -1.2
SMARCA4-208ENST00000585799 C5orf47Q569G3 176 aa7.55□□□□□ -1.2
SMARCA4-208ENST00000585799 OCR1Q9BZK8 76 aa7.54□□□□□ -1.2
SMARCA4-208ENST00000585799 PLA2G1BP04054 148 aaKnown RBP7.54□□□□□ -1.2
SMARCA4-208ENST00000585799 C1orf64Q8NEQ6 169 aa7.53□□□□□ -1.2
SMARCA4-208ENST00000585799 SPRR1BP22528 89 aa7.53□□□□□ -1.2
SMARCA4-208ENST00000585799 KLKP1Q107X0 134 aa7.52□□□□□ -1.21
SMARCA4-208ENST00000585799 ANK2Q01484 3957 aa7.52□□□□□ -1.21
SMARCA4-208ENST00000585799 SERP1Q9Y6X1 66 aa7.51□□□□□ -1.21
SMARCA4-208ENST00000585799 IGLV8-61A0A075B6I0 122 aa7.5□□□□□ -1.21
SMARCA4-208ENST00000585799 TYMSOSQ8TAI1 123 aa7.5□□□□□ -1.21
SMARCA4-208ENST00000585799 C8orf17Q9NRJ1 99 aa7.48□□□□□ -1.21
SMARCA4-208ENST00000585799 LINC00472Q9H8W2 130 aa7.47□□□□□ -1.21
SMARCA4-208ENST00000585799 TRAV22A0A0B4J277 110 aa7.46□□□□□ -1.22
SMARCA4-208ENST00000585799 A0A0U1RQV1 116 aa7.46□□□□□ -1.22
SMARCA4-208ENST00000585799 A0A1B0GVX0 72 aa7.45□□□□□ -1.22
SMARCA4-208ENST00000585799 ATP5EP56381 51 aaPredicted RBP7.45□□□□□ -1.22
SMARCA4-208ENST00000585799 DNAH9Q9NYC9 4486 aa7.45□□□□□ -1.22
SMARCA4-208ENST00000585799 SSBP3-AS1Q7Z2R9 100 aa7.45□□□□□ -1.22
SMARCA4-208ENST00000585799 KRTAP13-1Q8IUC0 172 aa7.45□□□□□ -1.22
SMARCA4-208ENST00000585799 DMBT1Q9UGM3 2413 aaPredicted RBP7.44□□□□□ -1.22
SMARCA4-208ENST00000585799 C4orf26Q17RF5 130 aa7.44□□□□□ -1.22
SMARCA4-208ENST00000585799 SMIM26A0A096LP01 95 aa7.43□□□□□ -1.22
SMARCA4-208ENST00000585799 MRPL34Q9BQ48 92 aaKnown RBP7.43□□□□□ -1.22
SMARCA4-208ENST00000585799 FLG2Q5D862 2391 aaPredicted RBP7.42□□□□□ -1.22
SMARCA4-208ENST00000585799 LINC00313P59037 77 aa7.41□□□□□ -1.22
SMARCA4-208ENST00000585799 A0A087X002 238 aa7.4□□□□□ -1.22
SMARCA4-208ENST00000585799 RPS28P62857 69 aaKnown RBP7.4□□□□□ -1.22
SMARCA4-208ENST00000585799 PRR26Q8N8Z3 221 aa7.4□□□□□ -1.22
SMARCA4-208ENST00000585799 PRKDCP78527 4128 aaKnown RBP7.4□□□□□ -1.23
SMARCA4-208ENST00000585799 MMP24-AS1A0A0U1RRL7 71 aa7.4□□□□□ -1.23
SMARCA4-208ENST00000585799 LIMD2Q9BT23 127 aa7.39□□□□□ -1.23
SMARCA4-208ENST00000585799 IGKV2D-30A0A075B6S6 120 aa7.39□□□□□ -1.23
SMARCA4-208ENST00000585799 IGKV2-30P06310 120 aa7.39□□□□□ -1.23
SMARCA4-208ENST00000585799 CHKB-CPT1BH3BT56 60 aa7.38□□□□□ -1.23
SMARCA4-208ENST00000585799 DNAH10Q8IVF4 4471 aa7.38□□□□□ -1.23
SMARCA4-208ENST00000585799 CMYA5Q8N3K9 4069 aa7.38□□□□□ -1.23
SMARCA4-208ENST00000585799 BRK1Q8WUW1 75 aa7.38□□□□□ -1.23
SMARCA4-208ENST00000585799 LINC00483Q53H64 154 aa7.38□□□□□ -1.23
SMARCA4-208ENST00000585799 PSPHP1O15172 72 aa7.37□□□□□ -1.23
SMARCA4-208ENST00000585799 TP53AIP1Q9HCN2 124 aa7.37□□□□□ -1.23
SMARCA4-208ENST00000585799 NOTCH2NLQ7Z3S9 236 aa7.36□□□□□ -1.23
SMARCA4-208ENST00000585799 OXTP01178 125 aa7.36□□□□□ -1.23
SMARCA4-208ENST00000585799 PLECQ15149 4684 aaKnown RBP7.35□□□□□ -1.23
SMARCA4-208ENST00000585799 Q96NJ1 140 aa7.34□□□□□ -1.23
SMARCA4-208ENST00000585799 LINC00336Q6ZUF6 198 aa7.34□□□□□ -1.23
SMARCA4-208ENST00000585799 LCE6AA0A183 80 aa7.33□□□□□ -1.24
SMARCA4-208ENST00000585799 LINC00304Q8N9R0 145 aa7.33□□□□□ -1.24
SMARCA4-208ENST00000585799 C9orf92A6NGG3 77 aa7.31□□□□□ -1.24
SMARCA4-208ENST00000585799 KRTAP29-1A8MX34 341 aaPredicted RBP7.3□□□□□ -1.24
SMARCA4-208ENST00000585799 FAM229AH3BQW9 127 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms