RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 A0A0G2JQZ4 141 aa9.34□□□□□ -0.91
RNF43-206ENST00000582293 PRR4Q16378 134 aa9.34□□□□□ -0.91
RNF43-206ENST00000582293 C4orf48Q5BLP8 95 aa9.34□□□□□ -0.91
RNF43-206ENST00000582293 CLEC2BQ92478 149 aa9.34□□□□□ -0.91
RNF43-206ENST00000582293 TSTD3H0UI37 97 aa9.33□□□□□ -0.92
RNF43-206ENST00000582293 RPS29P62273 56 aaKnown RBP9.32□□□□□ -0.92
RNF43-206ENST00000582293 A0A1B0GX51 115 aa9.31□□□□□ -0.92
RNF43-206ENST00000582293 M0R143 59 aa9.31□□□□□ -0.92
RNF43-206ENST00000582293 PSMB2P49721 201 aa9.3□□□□□ -0.92
RNF43-206ENST00000582293 HRCT1Q6UXD1 115 aa9.29□□□□□ -0.92
RNF43-206ENST00000582293 PPDPFLQ8WWR9 84 aa9.29□□□□□ -0.92
RNF43-206ENST00000582293 IGLV8-61A0A075B6I0 122 aa9.28□□□□□ -0.92
RNF43-206ENST00000582293 OCIAD2Q56VL3 154 aa9.26□□□□□ -0.93
RNF43-206ENST00000582293 CD164Q04900 197 aa9.25□□□□□ -0.93
RNF43-206ENST00000582293 COX6CP09669 75 aa9.24□□□□□ -0.93
RNF43-206ENST00000582293 NAA38Q9BRA0 125 aaKnown RBP9.24□□□□□ -0.93
RNF43-206ENST00000582293 F8WEM9 126 aa9.23□□□□□ -0.93
RNF43-206ENST00000582293 SNCGO76070 127 aa9.23□□□□□ -0.93
RNF43-206ENST00000582293 IGFL1Q6UW32 110 aa9.23□□□□□ -0.93
RNF43-206ENST00000582293 IGLV7-46A0A075B6I9 117 aa9.22□□□□□ -0.93
RNF43-206ENST00000582293 H3BUT2 72 aa9.22□□□□□ -0.93
RNF43-206ENST00000582293 SNHG12Q9BXW3 62 aa9.22□□□□□ -0.93
RNF43-206ENST00000582293 LST1O00453 97 aa9.21□□□□□ -0.94
RNF43-206ENST00000582293 FP248Q71RG6 208 aaPredicted RBP9.21□□□□□ -0.94
RNF43-206ENST00000582293 NDUFV3P56181 108 aaKnown RBP9.2□□□□□ -0.94
RNF43-206ENST00000582293 BATFQ16520 125 aa9.2□□□□□ -0.94
RNF43-206ENST00000582293 SCGB1C2P0DMR2 95 aa9.19□□□□□ -0.94
RNF43-206ENST00000582293 Q5XG85 94 aa9.19□□□□□ -0.94
RNF43-206ENST00000582293 Q6JHZ5 121 aa9.19□□□□□ -0.94
RNF43-206ENST00000582293 TRACP01848 142 aa9.18□□□□□ -0.94
RNF43-206ENST00000582293 FABP2P12104 132 aa9.18□□□□□ -0.94
RNF43-206ENST00000582293 TPRXLQ17RH7 258 aa9.18□□□□□ -0.94
RNF43-206ENST00000582293 DNAL4O96015 105 aa9.17□□□□□ -0.94
RNF43-206ENST00000582293 LIMD2Q9BT23 127 aa9.17□□□□□ -0.94
RNF43-206ENST00000582293 ORMDL1Q9P0S3 153 aa9.17□□□□□ -0.94
RNF43-206ENST00000582293 RNF213Q63HN8 5207 aa9.16□□□□□ -0.94
RNF43-206ENST00000582293 TCL1BO95988 128 aa9.15□□□□□ -0.94
RNF43-206ENST00000582293 KRTAP13-3Q3SY46 172 aa9.15□□□□□ -0.94
RNF43-206ENST00000582293 H3BMG7 143 aa9.14□□□□□ -0.95
RNF43-206ENST00000582293 TAX1BP3O14907 124 aa9.14□□□□□ -0.95
RNF43-206ENST00000582293 GHRHP01286 108 aa9.14□□□□□ -0.95
RNF43-206ENST00000582293 TRBV7-7A0A0K0K1E9 115 aa9.13□□□□□ -0.95
RNF43-206ENST00000582293 TMEM256-PLSCR3K7ERE1 68 aa9.12□□□□□ -0.95
RNF43-206ENST00000582293 C1orf195Q5TG92 126 aa9.12□□□□□ -0.95
RNF43-206ENST00000582293 MUC17Q685J3 4493 aa9.12□□□□□ -0.95
RNF43-206ENST00000582293 H3BQ85 93 aa9.1□□□□□ -0.95
RNF43-206ENST00000582293 UBE2V1Q13404 147 aa9.1□□□□□ -0.95
RNF43-206ENST00000582293 Q6Q795 121 aa9.1□□□□□ -0.95
RNF43-206ENST00000582293 C9orf118A6NHY6 69 aa9.09□□□□□ -0.95
RNF43-206ENST00000582293 ATXN8Q156A1 80 aa9.09□□□□□ -0.95
RNF43-206ENST00000582293 A0A1B0GV72 72 aa9.08□□□□□ -0.96
RNF43-206ENST00000582293 A0A1W2PNM2 257 aa9.08□□□□□ -0.96
RNF43-206ENST00000582293 ASB16-AS1Q495Z4 193 aa9.08□□□□□ -0.96
RNF43-206ENST00000582293 BAALC-AS2P0C853 105 aa9.07□□□□□ -0.96
RNF43-206ENST00000582293 CDIP1Q9H305 208 aa9.07□□□□□ -0.96
RNF43-206ENST00000582293 TEN1Q86WV5 123 aa9.05□□□□□ -0.96
RNF43-206ENST00000582293 A0A1W2PPM0 123 aa9.04□□□□□ -0.96
RNF43-206ENST00000582293 ANKRD29Q8N6D5 301 aa9.04□□□□□ -0.96
RNF43-206ENST00000582293 TRBV20-1A0A075B6N2 111 aa9.02□□□□□ -0.97
RNF43-206ENST00000582293 TRBV7-4A0A0J9YYF1 115 aa9.02□□□□□ -0.97
RNF43-206ENST00000582293 LYRM7Q5U5X0 104 aa9.02□□□□□ -0.97
RNF43-206ENST00000582293 A0A087WSZ3 146 aa9.01□□□□□ -0.97
RNF43-206ENST00000582293 MUC2Q02817 5179 aa8.99□□□□□ -0.97
RNF43-206ENST00000582293 PCP4L1A6NKN8 68 aa8.99□□□□□ -0.97
RNF43-206ENST00000582293 XP32Q5T750 250 aa8.99□□□□□ -0.97
RNF43-206ENST00000582293 C9JAW5 83 aa8.98□□□□□ -0.97
RNF43-206ENST00000582293 RBM3P98179 157 aaKnown RBP8.98□□□□□ -0.97
RNF43-206ENST00000582293 Q96NJ1 140 aa8.98□□□□□ -0.97
RNF43-206ENST00000582293 C9orf92A6NGG3 77 aa8.97□□□□□ -0.97
RNF43-206ENST00000582293 COL5A1-AS1Q5SY13 56 aa8.97□□□□□ -0.97
RNF43-206ENST00000582293 CCKP06307 115 aa8.96□□□□□ -0.98
RNF43-206ENST00000582293 SS18L2Q9UHA2 77 aa8.95□□□□□ -0.98
RNF43-206ENST00000582293 MTURNQ8N3F0 131 aa8.94□□□□□ -0.98
RNF43-206ENST00000582293 OBSCN-AS1Q96MR7 158 aa8.94□□□□□ -0.98
RNF43-206ENST00000582293 DSCR8Q96T75 97 aa8.92□□□□□ -0.98
RNF43-206ENST00000582293 SPCS1Q9Y6A9 102 aa8.92□□□□□ -0.98
RNF43-206ENST00000582293 JMJD7-PLA2G4BH0Y9G9 81 aa8.91□□□□□ -0.98
RNF43-206ENST00000582293 H3BT86 120 aa8.9□□□□□ -0.98
RNF43-206ENST00000582293 Q6ZQT0 140 aa8.9□□□□□ -0.98
RNF43-206ENST00000582293 LOC110117498A0A087WWA1 95 aa8.89□□□□□ -0.99
RNF43-206ENST00000582293 VPS25Q9BRG1 176 aa8.89□□□□□ -0.99
RNF43-206ENST00000582293 C14orf132Q9NPU4 83 aa8.88□□□□□ -0.99
RNF43-206ENST00000582293 SMCPP49901 116 aaPredicted RBP8.87□□□□□ -0.99
RNF43-206ENST00000582293 KRTAP4-1Q9BYQ7 146 aa8.87□□□□□ -0.99
RNF43-206ENST00000582293 LINC00472Q9H8W2 130 aa8.87□□□□□ -0.99
RNF43-206ENST00000582293 PRO0461Q9UI25 63 aa8.85□□□□□ -0.99
RNF43-206ENST00000582293 K7EP34 96 aa8.84□□□□□ -0.99
RNF43-206ENST00000582293 SEC61BP60468 96 aaKnown RBP8.84□□□□□ -0.99
RNF43-206ENST00000582293 DEFB116Q30KQ4 102 aa8.83□□□□□ -1
RNF43-206ENST00000582293 PDE6GP18545 87 aa8.81□□□□□ -1
RNF43-206ENST00000582293 IGKV4-1P06312 121 aa8.8□□□□□ -1
RNF43-206ENST00000582293 RPL37P61927 97 aaKnown RBP8.8□□□□□ -1
RNF43-206ENST00000582293 PCOTHQ58A44 107 aa8.79□□□□□ -1
RNF43-206ENST00000582293 SIGMAR1Q99720 223 aa8.79□□□□□ -1
RNF43-206ENST00000582293 A0A1B0GW54 56 aa8.77□□□□□ -1.01
RNF43-206ENST00000582293 DSCR10P59022 87 aa8.76□□□□□ -1.01
RNF43-206ENST00000582293 C21orf62-AS1Q17RA5 79 aa8.76□□□□□ -1.01
RNF43-206ENST00000582293 NOTCH2NLQ7Z3S9 236 aa8.76□□□□□ -1.01
RNF43-206ENST00000582293 FAT4Q6V0I7 4981 aa8.75□□□□□ -1.01
RNF43-206ENST00000582293 KRTAP16-1A8MUX0 517 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms