RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 IMUPQ9GZP8 106 aa5.76□□□□□ -1.49
SS18-220ENST00000582092 DNAH2Q9P225 4427 aa5.75□□□□□ -1.49
SS18-220ENST00000582092 PKHD1P08F94 4074 aa5.75□□□□□ -1.49
SS18-220ENST00000582092 A0A1B0GW54 56 aa5.75□□□□□ -1.49
SS18-220ENST00000582092 LINC01547P58512 204 aaPredicted RBP5.75□□□□□ -1.49
SS18-220ENST00000582092 HAMPP81172 84 aa5.75□□□□□ -1.49
SS18-220ENST00000582092 NREPQ16612 68 aa5.75□□□□□ -1.49
SS18-220ENST00000582092 C3orf22Q8N5N4 141 aa5.75□□□□□ -1.49
SS18-220ENST00000582092 PKD1P98161 4303 aa5.74□□□□□ -1.49
SS18-220ENST00000582092 IGKV3D-7A0A0C4DH55 119 aa5.74□□□□□ -1.49
SS18-220ENST00000582092 FAM229AH3BQW9 127 aa5.74□□□□□ -1.49
SS18-220ENST00000582092 KRTAP11-1Q8IUC1 163 aa5.74□□□□□ -1.49
SS18-220ENST00000582092 PSORS1C2Q9UIG4 136 aa5.74□□□□□ -1.49
SS18-220ENST00000582092 TRBV7-7A0A0K0K1E9 115 aa5.72□□□□□ -1.49
SS18-220ENST00000582092 ZNF861PO60384 105 aa5.72□□□□□ -1.49
SS18-220ENST00000582092 HIST1H4AP62805 103 aaKnown RBP5.72□□□□□ -1.49
SS18-220ENST00000582092 Q6ZVQ6 151 aa5.71□□□□□ -1.5
SS18-220ENST00000582092 DNAH11Q96DT5 4516 aa5.7□□□□□ -1.5
SS18-220ENST00000582092 SPRR1BP22528 89 aa5.7□□□□□ -1.5
SS18-220ENST00000582092 C9orf153Q5TBE3 101 aa5.7□□□□□ -1.5
SS18-220ENST00000582092 Q5VSD8 79 aa5.7□□□□□ -1.5
SS18-220ENST00000582092 Q8NBF4 154 aa5.7□□□□□ -1.5
SS18-220ENST00000582092 CIRBP-AS1Q8TBR5 109 aa5.7□□□□□ -1.5
SS18-220ENST00000582092 SMR3BP02814 79 aaPredicted RBP5.69□□□□□ -1.5
SS18-220ENST00000582092 PLA2G1BP04054 148 aaKnown RBP5.69□□□□□ -1.5
SS18-220ENST00000582092 IGLV7-43P04211 117 aa5.69□□□□□ -1.5
SS18-220ENST00000582092 SCXQ7RTU7 201 aa5.69□□□□□ -1.5
SS18-220ENST00000582092 SMIM29Q86T20 159 aa5.69□□□□□ -1.5
SS18-220ENST00000582092 ANAPC13Q9BS18 74 aa5.69□□□□□ -1.5
SS18-220ENST00000582092 FAM30AQ9NZY2 134 aa5.69□□□□□ -1.5
SS18-220ENST00000582092 IGLV8-61A0A075B6I0 122 aa5.68□□□□□ -1.5
SS18-220ENST00000582092 IGLV9-49A0A0B4J1Y8 123 aa5.68□□□□□ -1.5
SS18-220ENST00000582092 KRTAP13-1Q8IUC0 172 aa5.68□□□□□ -1.5
SS18-220ENST00000582092 SPRR4Q96PI1 79 aa5.68□□□□□ -1.5
SS18-220ENST00000582092 KRTAP17-1Q9BYP8 105 aa5.68□□□□□ -1.5
SS18-220ENST00000582092 KRTAP4-5Q9BYR2 181 aa5.68□□□□□ -1.5
SS18-220ENST00000582092 KIAA1109Q2LD37 5005 aa5.68□□□□□ -1.5
SS18-220ENST00000582092 A0A1W2PNM2 257 aa5.67□□□□□ -1.5
SS18-220ENST00000582092 BPY2O14599 106 aa5.67□□□□□ -1.5
SS18-220ENST00000582092 CXCL6P80162 114 aa5.67□□□□□ -1.5
SS18-220ENST00000582092 IGFL1Q6UW32 110 aa5.67□□□□□ -1.5
SS18-220ENST00000582092 Q6ZSA8 131 aa5.67□□□□□ -1.5
SS18-220ENST00000582092 DYNC1H1Q14204 4646 aaKnown RBP5.67□□□□□ -1.5
SS18-220ENST00000582092 FAM236AA0A1B0GUQ0 79 aa5.66□□□□□ -1.5
SS18-220ENST00000582092 FAM236BA0A1B0GV22 79 aa5.66□□□□□ -1.5
SS18-220ENST00000582092 CRYGAP11844 174 aa5.65□□□□□ -1.5
SS18-220ENST00000582092 RPL37AP61513 92 aaKnown RBP5.65□□□□□ -1.5
SS18-220ENST00000582092 HERC2O95714 4834 aa5.64□□□□□ -1.51
SS18-220ENST00000582092 ATOX1O00244 68 aa5.63□□□□□ -1.51
SS18-220ENST00000582092 LINC00483Q53H64 154 aa5.63□□□□□ -1.51
SS18-220ENST00000582092 A0A087WSZ3 146 aa5.62□□□□□ -1.51
SS18-220ENST00000582092 A0A0G2JQZ4 141 aa5.61□□□□□ -1.51
SS18-220ENST00000582092 MOBPQ13875 183 aa5.61□□□□□ -1.51
SS18-220ENST00000582092 LRP1BQ9NZR2 4599 aa5.61□□□□□ -1.51
SS18-220ENST00000582092 SS18L2Q9UHA2 77 aa5.61□□□□□ -1.51
SS18-220ENST00000582092 HSPG2P98160 4391 aa5.6□□□□□ -1.51
SS18-220ENST00000582092 A0A087WVE0 104 aa5.6□□□□□ -1.51
SS18-220ENST00000582092 HRCT1Q6UXD1 115 aa5.59□□□□□ -1.51
SS18-220ENST00000582092 ANAPC11Q9NYG5 84 aa5.59□□□□□ -1.51
SS18-220ENST00000582092 SSBP3-AS1Q7Z2R9 100 aa5.58□□□□□ -1.52
SS18-220ENST00000582092 SMIM20Q8N5G0 67 aa5.58□□□□□ -1.52
SS18-220ENST00000582092 FLG2Q5D862 2391 aaPredicted RBP5.57□□□□□ -1.52
SS18-220ENST00000582092 J3KT08 172 aa5.57□□□□□ -1.52
SS18-220ENST00000582092 J3QL48 77 aa5.57□□□□□ -1.52
SS18-220ENST00000582092 NDUFB1O75438 58 aa5.57□□□□□ -1.52
SS18-220ENST00000582092 RYR1P21817 5038 aa5.56□□□□□ -1.52
SS18-220ENST00000582092 APOBP04114 4563 aaKnown RBP5.55□□□□□ -1.52
SS18-220ENST00000582092 FAM229BQ4G0N7 80 aa5.55□□□□□ -1.52
SS18-220ENST00000582092 C4orf48Q5BLP8 95 aa5.55□□□□□ -1.52
SS18-220ENST00000582092 DNAH5Q8TE73 4624 aa5.55□□□□□ -1.52
SS18-220ENST00000582092 IGKV4-1P06312 121 aa5.54□□□□□ -1.52
SS18-220ENST00000582092 DEFB116Q30KQ4 102 aa5.54□□□□□ -1.52
SS18-220ENST00000582092 SPINK6Q6UWN8 80 aa5.54□□□□□ -1.52
SS18-220ENST00000582092 SERP2Q8N6R1 65 aa5.54□□□□□ -1.52
SS18-220ENST00000582092 Q8N9L7 120 aa5.54□□□□□ -1.52
SS18-220ENST00000582092 DMBT1Q9UGM3 2413 aaPredicted RBP5.53□□□□□ -1.52
SS18-220ENST00000582092 OXTP01178 125 aa5.53□□□□□ -1.52
SS18-220ENST00000582092 CD164Q04900 197 aa5.53□□□□□ -1.52
SS18-220ENST00000582092 KRTAP29-1A8MX34 341 aaPredicted RBP5.52□□□□□ -1.53
SS18-220ENST00000582092 UQCRQO14949 82 aa5.52□□□□□ -1.53
SS18-220ENST00000582092 COX7CP15954 63 aa5.52□□□□□ -1.53
SS18-220ENST00000582092 TRAV7A0A075B6U4 112 aa5.51□□□□□ -1.53
SS18-220ENST00000582092 SRRM2Q9UQ35 2752 aaKnown RBP5.51□□□□□ -1.53
SS18-220ENST00000582092 A8MWP4 228 aa5.5□□□□□ -1.53
SS18-220ENST00000582092 DSCR10P59022 87 aa5.5□□□□□ -1.53
SS18-220ENST00000582092 TYMSOSQ8TAI1 123 aa5.5□□□□□ -1.53
SS18-220ENST00000582092 HCG22E2RYF7 251 aa5.49□□□□□ -1.53
SS18-220ENST00000582092 CCDC179H3BU77 68 aa5.49□□□□□ -1.53
SS18-220ENST00000582092 K7EQZ3 153 aa5.49□□□□□ -1.53
SS18-220ENST00000582092 LINC00472Q9H8W2 130 aa5.49□□□□□ -1.53
SS18-220ENST00000582092 PCLOQ9Y6V0 5065 aa5.49□□□□□ -1.53
SS18-220ENST00000582092 KRTAP10-4P60372 401 aaPredicted RBP5.48□□□□□ -1.53
SS18-220ENST00000582092 PRR15Q8IV56 129 aa5.48□□□□□ -1.53
SS18-220ENST00000582092 LIMD2Q9BT23 127 aa5.48□□□□□ -1.53
SS18-220ENST00000582092 WFDC13Q8IUB5 93 aa5.47□□□□□ -1.53
SS18-220ENST00000582092 CASC2Q6XLA1 102 aa5.46□□□□□ -1.54
SS18-220ENST00000582092 A0A087X002 238 aa5.45□□□□□ -1.54
SS18-220ENST00000582092 IGHV6-1A0A0B4J1U7 121 aa5.44□□□□□ -1.54
SS18-220ENST00000582092 FAT1Q14517 4588 aa5.44□□□□□ -1.54
SS18-220ENST00000582092 SPINK1P00995 79 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms