RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 SYS1-DBNDD2H3BUS1 97 aa1.45□□□□□ -2.18
KPNB1-208ENST00000580019 EDDM3BP56851 147 aa1.45□□□□□ -2.18
KPNB1-208ENST00000580019 DEFB112Q30KQ8 113 aa1.45□□□□□ -2.18
KPNB1-208ENST00000580019 UNQ6190/PRO20217Q6UXQ8 127 aa1.45□□□□□ -2.18
KPNB1-208ENST00000580019 Q8N6K4 173 aa1.45□□□□□ -2.18
KPNB1-208ENST00000580019 S100A13Q99584 98 aa1.45□□□□□ -2.18
KPNB1-208ENST00000580019 CYSTM1Q9H1C7 97 aa1.45□□□□□ -2.18
KPNB1-208ENST00000580019 PKHD1L1Q86WI1 4243 aa1.44□□□□□ -2.18
KPNB1-208ENST00000580019 DNAH8Q96JB1 4490 aa1.44□□□□□ -2.18
KPNB1-208ENST00000580019 CHKB-CPT1BH3BT56 60 aa1.44□□□□□ -2.18
KPNB1-208ENST00000580019 APOC3P02656 99 aa1.44□□□□□ -2.18
KPNB1-208ENST00000580019 KRTAP13-4Q3LI77 160 aa1.44□□□□□ -2.18
KPNB1-208ENST00000580019 C5orf56Q8N8D9 126 aa1.44□□□□□ -2.18
KPNB1-208ENST00000580019 DEFB108BQ8NET1 73 aa1.44□□□□□ -2.18
KPNB1-208ENST00000580019 ZNF563Q8TA94 476 aa1.44□□□□□ -2.18
KPNB1-208ENST00000580019 S100A16Q96FQ6 103 aaKnown RBP1.44□□□□□ -2.18
KPNB1-208ENST00000580019 LRP1Q07954 4544 aaKnown RBP1.43□□□□□ -2.18
KPNB1-208ENST00000580019 TRAV22A0A0B4J277 110 aa1.43□□□□□ -2.18
KPNB1-208ENST00000580019 FXYD1O00168 92 aa1.43□□□□□ -2.18
KPNB1-208ENST00000580019 PPP1R17O96001 155 aa1.43□□□□□ -2.18
KPNB1-208ENST00000580019 NMBP08949 121 aa1.43□□□□□ -2.18
KPNB1-208ENST00000580019 TRAPPC2P0DI81 140 aa1.43□□□□□ -2.18
KPNB1-208ENST00000580019 TRAPPC2BP0DI82 140 aa1.43□□□□□ -2.18
KPNB1-208ENST00000580019 FXYD4P59646 89 aa1.43□□□□□ -2.18
KPNB1-208ENST00000580019 SPAG11BQ08648 103 aa1.43□□□□□ -2.18
KPNB1-208ENST00000580019 KLKP1Q107X0 134 aa1.43□□□□□ -2.18
KPNB1-208ENST00000580019 Q5VV11 94 aa1.43□□□□□ -2.18
KPNB1-208ENST00000580019 SPAG11AQ6PDA7 123 aa1.43□□□□□ -2.18
KPNB1-208ENST00000580019 Q6ZQY7 126 aa1.43□□□□□ -2.18
KPNB1-208ENST00000580019 VMO1Q7Z5L0 202 aa1.43□□□□□ -2.18
KPNB1-208ENST00000580019 Q86TA4 180 aa1.43□□□□□ -2.18
KPNB1-208ENST00000580019 OBSCN-AS1Q96MR7 158 aa1.43□□□□□ -2.18
KPNB1-208ENST00000580019 C20orf78Q9BR46 151 aa1.43□□□□□ -2.18
KPNB1-208ENST00000580019 NDUFA4L2Q9NRX3 87 aa1.43□□□□□ -2.18
KPNB1-208ENST00000580019 R4GMQ9 66 aa1.43□□□□□ -2.18
KPNB1-208ENST00000580019 V9GYV3 84 aa1.43□□□□□ -2.18
KPNB1-208ENST00000580019 LRP2P98164 4655 aa1.43□□□□□ -2.18
KPNB1-208ENST00000580019 H7BZZ5 65 aa1.42□□□□□ -2.18
KPNB1-208ENST00000580019 CAV3P56539 151 aa1.42□□□□□ -2.18
KPNB1-208ENST00000580019 TMEM170BQ5T4T1 132 aa1.42□□□□□ -2.18
KPNB1-208ENST00000580019 AMELXQ99217 191 aa1.42□□□□□ -2.18
KPNB1-208ENST00000580019 NXT2Q9NPJ8 142 aaKnown RBP1.42□□□□□ -2.18
KPNB1-208ENST00000580019 V9GYH0 126 aa1.42□□□□□ -2.18
KPNB1-208ENST00000580019 A0A0G2JND7 137 aa1.41□□□□□ -2.18
KPNB1-208ENST00000580019 TMEM14DPA8MWL7 114 aa1.41□□□□□ -2.18
KPNB1-208ENST00000580019 HMGN4O00479 90 aa1.41□□□□□ -2.18
KPNB1-208ENST00000580019 SMIM11AP58511 58 aa1.41□□□□□ -2.18
KPNB1-208ENST00000580019 CDC42SE2Q9NRR3 84 aa1.41□□□□□ -2.18
KPNB1-208ENST00000580019 TNXBP22105 4242 aa1.41□□□□□ -2.18
KPNB1-208ENST00000580019 TRBV25-1A0A075B6N4 114 aa1.4□□□□□ -2.19
KPNB1-208ENST00000580019 BCE1O60756 84 aa1.4□□□□□ -2.19
KPNB1-208ENST00000580019 CCL18P55774 89 aa1.4□□□□□ -2.19
KPNB1-208ENST00000580019 PMCHL1Q16048 86 aa1.4□□□□□ -2.19
KPNB1-208ENST00000580019 NCBP2-AS2Q69YL0 99 aa1.4□□□□□ -2.19
KPNB1-208ENST00000580019 LINC00208Q96KT6 92 aa1.4□□□□□ -2.19
KPNB1-208ENST00000580019 SORL1Q92673 2214 aa1.4□□□□□ -2.19
KPNB1-208ENST00000580019 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.39□□□□□ -2.19
KPNB1-208ENST00000580019 IGLC7A0M8Q6 106 aa1.39□□□□□ -2.19
KPNB1-208ENST00000580019 CCL22O00626 93 aa1.39□□□□□ -2.19
KPNB1-208ENST00000580019 SAA2P0DJI9 122 aaPredicted RBP1.39□□□□□ -2.19
KPNB1-208ENST00000580019 ADIRFQ15847 76 aa1.39□□□□□ -2.19
KPNB1-208ENST00000580019 PCOTHQ58A44 107 aa1.39□□□□□ -2.19
KPNB1-208ENST00000580019 Q5VSD8 79 aa1.39□□□□□ -2.19
KPNB1-208ENST00000580019 BAGE3Q86Y29 109 aa1.39□□□□□ -2.19
KPNB1-208ENST00000580019 TMEM14BQ9NUH8 114 aa1.39□□□□□ -2.19
KPNB1-208ENST00000580019 FCGBPQ9Y6R7 5405 aaPredicted RBP1.39□□□□□ -2.19
KPNB1-208ENST00000580019 A0A087WTM6 91 aa1.38□□□□□ -2.19
KPNB1-208ENST00000580019 A0A1W2PPM0 123 aa1.38□□□□□ -2.19
KPNB1-208ENST00000580019 TDRG1Q3Y452 100 aa1.38□□□□□ -2.19
KPNB1-208ENST00000580019 PSMG4Q5JS54 123 aa1.38□□□□□ -2.19
KPNB1-208ENST00000580019 LELP1Q5T871 98 aa1.38□□□□□ -2.19
KPNB1-208ENST00000580019 SFTA2Q6UW10 78 aa1.38□□□□□ -2.19
KPNB1-208ENST00000580019 C10orf99Q6UWK7 81 aa1.38□□□□□ -2.19
KPNB1-208ENST00000580019 LINC00575Q6W349 94 aa1.38□□□□□ -2.19
KPNB1-208ENST00000580019 ZCCHC13Q8WW36 166 aaKnown RBP1.38□□□□□ -2.19
KPNB1-208ENST00000580019 SPCS1Q9Y6A9 102 aa1.38□□□□□ -2.19
KPNB1-208ENST00000580019 TNCP24821 2201 aa1.38□□□□□ -2.19
KPNB1-208ENST00000580019 KANTRA0A1W2PQU2 76 aa1.37□□□□□ -2.19
KPNB1-208ENST00000580019 ZNF815PA8K554 130 aa1.37□□□□□ -2.19
KPNB1-208ENST00000580019 F8VRH5 84 aa1.37□□□□□ -2.19
KPNB1-208ENST00000580019 NCR3O14931 201 aa1.37□□□□□ -2.19
KPNB1-208ENST00000580019 UQCR11O14957 56 aa1.37□□□□□ -2.19
KPNB1-208ENST00000580019 ALKAL2Q6UX46 152 aa1.37□□□□□ -2.19
KPNB1-208ENST00000580019 WFDC6Q9BQY6 131 aa1.37□□□□□ -2.19
KPNB1-208ENST00000580019 ST20Q9HBF5 79 aa1.37□□□□□ -2.19
KPNB1-208ENST00000580019 ARL2-SNX15V9GYD0 113 aa1.37□□□□□ -2.19
KPNB1-208ENST00000580019 TRBV30A0A0K0K1B3 111 aa1.36□□□□□ -2.19
KPNB1-208ENST00000580019 CTXND1A0A1B0GTU2 59 aa1.36□□□□□ -2.19
KPNB1-208ENST00000580019 H3BUX3 64 aa1.36□□□□□ -2.19
KPNB1-208ENST00000580019 M0R135 149 aa1.36□□□□□ -2.19
KPNB1-208ENST00000580019 KRTAP10-10P60014 251 aa1.36□□□□□ -2.19
KPNB1-208ENST00000580019 ETDBQ3ZM63 59 aa1.36□□□□□ -2.19
KPNB1-208ENST00000580019 BAGE2Q86Y30 109 aa1.36□□□□□ -2.19
KPNB1-208ENST00000580019 FAM223AQ8IWN6 122 aa1.36□□□□□ -2.19
KPNB1-208ENST00000580019 HIGD1BQ9P298 99 aa1.36□□□□□ -2.19
KPNB1-208ENST00000580019 TRAV1-2A0A0B4J238 106 aa1.35□□□□□ -2.19
KPNB1-208ENST00000580019 F2Z2F3 143 aa1.35□□□□□ -2.19
KPNB1-208ENST00000580019 COX17Q14061 63 aa1.35□□□□□ -2.19
KPNB1-208ENST00000580019 SMIM4Q8WVI0 70 aa1.35□□□□□ -2.19
KPNB1-208ENST00000580019 LINC01558Q9Y6Z2 57 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms