RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 JMJD7-PLA2G4BH0Y9G9 81 aa8.48□□□□□ -1.05
CSNK1D-209ENST00000578904 F8WEM9 126 aa8.47□□□□□ -1.05
CSNK1D-209ENST00000578904 C4orf48Q5BLP8 95 aa8.47□□□□□ -1.05
CSNK1D-209ENST00000578904 GAGE2AQ6NT46 116 aa8.46□□□□□ -1.06
CSNK1D-209ENST00000578904 SPINK6Q6UWN8 80 aa8.46□□□□□ -1.06
CSNK1D-209ENST00000578904 TEN1Q86WV5 123 aa8.46□□□□□ -1.06
CSNK1D-209ENST00000578904 ST20-AS1Q8NBB2 130 aa8.46□□□□□ -1.06
CSNK1D-209ENST00000578904 SPRR1BP22528 89 aa8.45□□□□□ -1.06
CSNK1D-209ENST00000578904 SMCPP49901 116 aaPredicted RBP8.45□□□□□ -1.06
CSNK1D-209ENST00000578904 NDUFV3P56181 108 aaKnown RBP8.45□□□□□ -1.06
CSNK1D-209ENST00000578904 C21orf62-AS1Q17RA5 79 aa8.45□□□□□ -1.06
CSNK1D-209ENST00000578904 Q8N377 158 aa8.45□□□□□ -1.06
CSNK1D-209ENST00000578904 PKHD1L1Q86WI1 4243 aa8.45□□□□□ -1.06
CSNK1D-209ENST00000578904 SPRR4Q96PI1 79 aa8.44□□□□□ -1.06
CSNK1D-209ENST00000578904 LINC01547P58512 204 aaPredicted RBP8.43□□□□□ -1.06
CSNK1D-209ENST00000578904 RBM3P98179 157 aaKnown RBP8.43□□□□□ -1.06
CSNK1D-209ENST00000578904 ETDBQ3ZM63 59 aa8.43□□□□□ -1.06
CSNK1D-209ENST00000578904 SRRM2Q9UQ35 2752 aaKnown RBP8.41□□□□□ -1.06
CSNK1D-209ENST00000578904 PDE6GP18545 87 aa8.41□□□□□ -1.06
CSNK1D-209ENST00000578904 LINC00483Q53H64 154 aa8.41□□□□□ -1.06
CSNK1D-209ENST00000578904 DSCR8Q96T75 97 aa8.41□□□□□ -1.06
CSNK1D-209ENST00000578904 J3QR89 54 aa8.39□□□□□ -1.07
CSNK1D-209ENST00000578904 OBSCN-AS1Q96MR7 158 aa8.38□□□□□ -1.07
CSNK1D-209ENST00000578904 FAM229BQ4G0N7 80 aa8.37□□□□□ -1.07
CSNK1D-209ENST00000578904 Q6JHZ5 121 aa8.37□□□□□ -1.07
CSNK1D-209ENST00000578904 SMIM29Q86T20 159 aa8.36□□□□□ -1.07
CSNK1D-209ENST00000578904 C3orf22Q8N5N4 141 aa8.35□□□□□ -1.07
CSNK1D-209ENST00000578904 C9orf153Q5TBE3 101 aa8.34□□□□□ -1.07
CSNK1D-209ENST00000578904 C14orf132Q9NPU4 83 aa8.34□□□□□ -1.07
CSNK1D-209ENST00000578904 IGLV8-61A0A075B6I0 122 aa8.33□□□□□ -1.08
CSNK1D-209ENST00000578904 LOC110117498A0A087WWA1 95 aa8.33□□□□□ -1.08
CSNK1D-209ENST00000578904 A0A1B0GV72 72 aa8.33□□□□□ -1.08
CSNK1D-209ENST00000578904 CRYGAP11844 174 aa8.33□□□□□ -1.08
CSNK1D-209ENST00000578904 FLG2Q5D862 2391 aaPredicted RBP8.33□□□□□ -1.08
CSNK1D-209ENST00000578904 IGLV9-49A0A0B4J1Y8 123 aa8.32□□□□□ -1.08
CSNK1D-209ENST00000578904 Q8NBF4 154 aa8.32□□□□□ -1.08
CSNK1D-209ENST00000578904 TRBV7-4A0A0J9YYF1 115 aa8.31□□□□□ -1.08
CSNK1D-209ENST00000578904 K7ERU9 68 aa8.31□□□□□ -1.08
CSNK1D-209ENST00000578904 SSBP3-AS1Q7Z2R9 100 aa8.31□□□□□ -1.08
CSNK1D-209ENST00000578904 A0A1B0GW54 56 aa8.29□□□□□ -1.08
CSNK1D-209ENST00000578904 CCKP06307 115 aa8.29□□□□□ -1.08
CSNK1D-209ENST00000578904 MYCBP2O75592 4640 aa8.28□□□□□ -1.08
CSNK1D-209ENST00000578904 ACYP1P07311 99 aa8.28□□□□□ -1.08
CSNK1D-209ENST00000578904 MOBPQ13875 183 aa8.28□□□□□ -1.08
CSNK1D-209ENST00000578904 Q6ZQT0 140 aa8.28□□□□□ -1.08
CSNK1D-209ENST00000578904 ANAPC11Q9NYG5 84 aa8.28□□□□□ -1.08
CSNK1D-209ENST00000578904 LCE2DQ5TA82 110 aaPredicted RBP8.27□□□□□ -1.09
CSNK1D-209ENST00000578904 VPS25Q9BRG1 176 aa8.27□□□□□ -1.09
CSNK1D-209ENST00000578904 FAT3Q8TDW7 4589 aa8.26□□□□□ -1.09
CSNK1D-209ENST00000578904 KRTAP1-4P0C5Y4 121 aa8.26□□□□□ -1.09
CSNK1D-209ENST00000578904 IGFL1Q6UW32 110 aa8.26□□□□□ -1.09
CSNK1D-209ENST00000578904 DMBT1Q9UGM3 2413 aaPredicted RBP8.25□□□□□ -1.09
CSNK1D-209ENST00000578904 FAM240AA0A1B0GVK7 77 aa8.25□□□□□ -1.09
CSNK1D-209ENST00000578904 OXTP01178 125 aa8.25□□□□□ -1.09
CSNK1D-209ENST00000578904 TYMSOSQ8TAI1 123 aa8.24□□□□□ -1.09
CSNK1D-209ENST00000578904 LRP1Q07954 4544 aaKnown RBP8.23□□□□□ -1.09
CSNK1D-209ENST00000578904 KRTAP29-1A8MX34 341 aaPredicted RBP8.23□□□□□ -1.09
CSNK1D-209ENST00000578904 Q6Q795 121 aa8.23□□□□□ -1.09
CSNK1D-209ENST00000578904 A0A087X002 238 aa8.22□□□□□ -1.09
CSNK1D-209ENST00000578904 CD164Q04900 197 aa8.22□□□□□ -1.09
CSNK1D-209ENST00000578904 UBR4Q5T4S7 5183 aa8.21□□□□□ -1.09
CSNK1D-209ENST00000578904 J3QL48 77 aa8.21□□□□□ -1.1
CSNK1D-209ENST00000578904 PRR26Q8N8Z3 221 aa8.21□□□□□ -1.1
CSNK1D-209ENST00000578904 A0A1W2PNM2 257 aa8.19□□□□□ -1.1
CSNK1D-209ENST00000578904 KRTAP13-2Q52LG2 175 aa8.19□□□□□ -1.1
CSNK1D-209ENST00000578904 SPAG11AQ6PDA7 123 aa8.19□□□□□ -1.1
CSNK1D-209ENST00000578904 UBL5Q9BZL1 73 aa8.18□□□□□ -1.1
CSNK1D-209ENST00000578904 SS18L2Q9UHA2 77 aa8.18□□□□□ -1.1
CSNK1D-209ENST00000578904 TNXBP22105 4242 aa8.17□□□□□ -1.1
CSNK1D-209ENST00000578904 TRBV7-7A0A0K0K1E9 115 aa8.16□□□□□ -1.1
CSNK1D-209ENST00000578904 MT1HL1P0DM35 61 aa8.16□□□□□ -1.1
CSNK1D-209ENST00000578904 KRTAP10-8P60410 259 aa8.15□□□□□ -1.1
CSNK1D-209ENST00000578904 SPINK1P00995 79 aa8.14□□□□□ -1.11
CSNK1D-209ENST00000578904 NREPQ16612 68 aa8.14□□□□□ -1.11
CSNK1D-209ENST00000578904 HRCT1Q6UXD1 115 aa8.14□□□□□ -1.11
CSNK1D-209ENST00000578904 LINC00304Q8N9R0 145 aa8.14□□□□□ -1.11
CSNK1D-209ENST00000578904 LIMD2Q9BT23 127 aa8.14□□□□□ -1.11
CSNK1D-209ENST00000578904 A0A087WSZ3 146 aa8.13□□□□□ -1.11
CSNK1D-209ENST00000578904 A0A0G2JQZ4 141 aa8.13□□□□□ -1.11
CSNK1D-209ENST00000578904 LINC00846Q9NV44 126 aa8.12□□□□□ -1.11
CSNK1D-209ENST00000578904 RPS29P62273 56 aaKnown RBP8.11□□□□□ -1.11
CSNK1D-209ENST00000578904 LINC00643Q86TS7 51 aa8.09□□□□□ -1.11
CSNK1D-209ENST00000578904 Q5XG85 94 aa8.08□□□□□ -1.12
CSNK1D-209ENST00000578904 Q6ZVQ6 151 aa8.08□□□□□ -1.12
CSNK1D-209ENST00000578904 ATP5EP2Q5VTU8 51 aa8.07□□□□□ -1.12
CSNK1D-209ENST00000578904 ASB16-AS1Q495Z4 193 aa8.06□□□□□ -1.12
CSNK1D-209ENST00000578904 KRTAP3-3Q9BYR6 98 aa8.06□□□□□ -1.12
CSNK1D-209ENST00000578904 KRTAP3-2Q9BYR7 98 aa8.06□□□□□ -1.12
CSNK1D-209ENST00000578904 J3KT08 172 aa8.05□□□□□ -1.12
CSNK1D-209ENST00000578904 BPY2O14599 106 aa8.04□□□□□ -1.12
CSNK1D-209ENST00000578904 SIGMAR1Q99720 223 aa8.03□□□□□ -1.12
CSNK1D-209ENST00000578904 CDIP1Q9H305 208 aa8.03□□□□□ -1.12
CSNK1D-209ENST00000578904 CXCL6P80162 114 aa8.02□□□□□ -1.13
CSNK1D-209ENST00000578904 NDUFB1O75438 58 aa7.99□□□□□ -1.13
CSNK1D-209ENST00000578904 LINC00472Q9H8W2 130 aa7.99□□□□□ -1.13
CSNK1D-209ENST00000578904 HMCN2Q8NDA2 5059 aa7.99□□□□□ -1.13
CSNK1D-209ENST00000578904 IGKV4-1P06312 121 aa7.98□□□□□ -1.13
CSNK1D-209ENST00000578904 IGKV3D-7A0A0C4DH55 119 aa7.95□□□□□ -1.14
CSNK1D-209ENST00000578904 IMUPQ9GZP8 106 aa7.95□□□□□ -1.14
CSNK1D-209ENST00000578904 C1orf195Q5TG92 126 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms