RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 SERP2Q8N6R1 65 aa8.72□□□□□ -1.01
VPS33B-208ENST00000574755 SRRM2Q9UQ35 2752 aaKnown RBP8.71□□□□□ -1.01
VPS33B-208ENST00000574755 BCE1O60756 84 aa8.71□□□□□ -1.01
VPS33B-208ENST00000574755 SPRR4Q96PI1 79 aa8.71□□□□□ -1.02
VPS33B-208ENST00000574755 BPY2O14599 106 aa8.7□□□□□ -1.02
VPS33B-208ENST00000574755 KRTAP21-3Q3LHN1 58 aa8.7□□□□□ -1.02
VPS33B-208ENST00000574755 HECTD4Q9Y4D8 3996 aa8.69□□□□□ -1.02
VPS33B-208ENST00000574755 IGFL1Q6UW32 110 aa8.69□□□□□ -1.02
VPS33B-208ENST00000574755 IGLV5-52A0A0A0MRZ9 124 aa8.69□□□□□ -1.02
VPS33B-208ENST00000574755 A0A0G2JQZ4 141 aa8.69□□□□□ -1.02
VPS33B-208ENST00000574755 Q8N9L7 120 aa8.68□□□□□ -1.02
VPS33B-208ENST00000574755 CRYGAP11844 174 aa8.67□□□□□ -1.02
VPS33B-208ENST00000574755 WWC2-AS2Q96NR7 200 aa8.67□□□□□ -1.02
VPS33B-208ENST00000574755 SS18L2Q9UHA2 77 aa8.67□□□□□ -1.02
VPS33B-208ENST00000574755 IGLV8-61A0A075B6I0 122 aa8.66□□□□□ -1.02
VPS33B-208ENST00000574755 KRTAP13-1Q8IUC0 172 aa8.66□□□□□ -1.02
VPS33B-208ENST00000574755 SPRR1BP22528 89 aa8.66□□□□□ -1.02
VPS33B-208ENST00000574755 IGKV4-1P06312 121 aa8.64□□□□□ -1.03
VPS33B-208ENST00000574755 DNAH17Q9UFH2 4485 aa8.64□□□□□ -1.03
VPS33B-208ENST00000574755 PLAC8Q9NZF1 115 aa8.63□□□□□ -1.03
VPS33B-208ENST00000574755 PSORS1C2Q9UIG4 136 aa8.61□□□□□ -1.03
VPS33B-208ENST00000574755 A0A087WSZ3 146 aa8.6□□□□□ -1.03
VPS33B-208ENST00000574755 SMIM20Q8N5G0 67 aa8.6□□□□□ -1.03
VPS33B-208ENST00000574755 TRAV7A0A075B6U4 112 aa8.59□□□□□ -1.03
VPS33B-208ENST00000574755 CYSTM1Q9H1C7 97 aa8.58□□□□□ -1.04
VPS33B-208ENST00000574755 DNAH8Q96JB1 4490 aa8.56□□□□□ -1.04
VPS33B-208ENST00000574755 DSCR10P59022 87 aa8.56□□□□□ -1.04
VPS33B-208ENST00000574755 DNAH6Q9C0G6 4158 aa8.55□□□□□ -1.04
VPS33B-208ENST00000574755 C20orf197Q8N268 126 aa8.55□□□□□ -1.04
VPS33B-208ENST00000574755 KRTAP10-2P60368 255 aa8.55□□□□□ -1.04
VPS33B-208ENST00000574755 IGLV9-49A0A0B4J1Y8 123 aa8.54□□□□□ -1.04
VPS33B-208ENST00000574755 K7EQZ3 153 aa8.54□□□□□ -1.04
VPS33B-208ENST00000574755 DEFB116Q30KQ4 102 aa8.54□□□□□ -1.04
VPS33B-208ENST00000574755 ZNF706Q9Y5V0 76 aaPredicted RBP8.54□□□□□ -1.04
VPS33B-208ENST00000574755 ZNF861PO60384 105 aa8.53□□□□□ -1.04
VPS33B-208ENST00000574755 FRAS1Q86XX4 4008 aa8.53□□□□□ -1.04
VPS33B-208ENST00000574755 LINC00483Q53H64 154 aa8.52□□□□□ -1.05
VPS33B-208ENST00000574755 ALMS1Q8TCU4 4167 aa8.52□□□□□ -1.05
VPS33B-208ENST00000574755 HYDINQ4G0P3 5121 aa8.5□□□□□ -1.05
VPS33B-208ENST00000574755 FAM30AQ9NZY2 134 aa8.5□□□□□ -1.05
VPS33B-208ENST00000574755 CIRBP-AS1Q8TBR5 109 aa8.49□□□□□ -1.05
VPS33B-208ENST00000574755 DNAH5Q8TE73 4624 aa8.48□□□□□ -1.05
VPS33B-208ENST00000574755 OCR1Q9BZK8 76 aa8.48□□□□□ -1.05
VPS33B-208ENST00000574755 IGLV7-43P04211 117 aa8.47□□□□□ -1.05
VPS33B-208ENST00000574755 TMEM258P61165 79 aa8.47□□□□□ -1.05
VPS33B-208ENST00000574755 DNAH11Q96DT5 4516 aa8.47□□□□□ -1.05
VPS33B-208ENST00000574755 ANAPC11Q9NYG5 84 aa8.47□□□□□ -1.05
VPS33B-208ENST00000574755 SNURFQ9Y675 71 aa8.47□□□□□ -1.05
VPS33B-208ENST00000574755 RPL37AP61513 92 aaKnown RBP8.46□□□□□ -1.06
VPS33B-208ENST00000574755 KLKP1Q107X0 134 aa8.46□□□□□ -1.06
VPS33B-208ENST00000574755 MOBPQ13875 183 aa8.46□□□□□ -1.06
VPS33B-208ENST00000574755 HCG22E2RYF7 251 aa8.45□□□□□ -1.06
VPS33B-208ENST00000574755 LINC00472Q9H8W2 130 aa8.44□□□□□ -1.06
VPS33B-208ENST00000574755 PKD1P98161 4303 aa8.44□□□□□ -1.06
VPS33B-208ENST00000574755 HRCT1Q6UXD1 115 aa8.43□□□□□ -1.06
VPS33B-208ENST00000574755 FAT2Q9NYQ8 4349 aa8.43□□□□□ -1.06
VPS33B-208ENST00000574755 KRTAP10-1P60331 282 aa8.43□□□□□ -1.06
VPS33B-208ENST00000574755 TMEM254Q8TBM7 123 aa8.43□□□□□ -1.06
VPS33B-208ENST00000574755 Q6ZSA8 131 aa8.42□□□□□ -1.06
VPS33B-208ENST00000574755 H7BZZ5 65 aa8.41□□□□□ -1.06
VPS33B-208ENST00000574755 WFDC13Q8IUB5 93 aa8.41□□□□□ -1.06
VPS33B-208ENST00000574755 A8MWP4 228 aa8.4□□□□□ -1.06
VPS33B-208ENST00000574755 PRR15Q8IV56 129 aa8.39□□□□□ -1.07
VPS33B-208ENST00000574755 J3KT08 172 aa8.38□□□□□ -1.07
VPS33B-208ENST00000574755 NDUFC1O43677 76 aa8.36□□□□□ -1.07
VPS33B-208ENST00000574755 Q96NJ1 140 aa8.36□□□□□ -1.07
VPS33B-208ENST00000574755 A0A0U1RQV1 116 aa8.35□□□□□ -1.07
VPS33B-208ENST00000574755 CASC2Q6XLA1 102 aa8.35□□□□□ -1.07
VPS33B-208ENST00000574755 FAM236DA0A1B0GTK5 79 aa8.34□□□□□ -1.07
VPS33B-208ENST00000574755 NDUFB1O75438 58 aa8.34□□□□□ -1.07
VPS33B-208ENST00000574755 FAM236CP0DP71 79 aa8.34□□□□□ -1.07
VPS33B-208ENST00000574755 KRTAP29-1A8MX34 341 aaPredicted RBP8.33□□□□□ -1.08
VPS33B-208ENST00000574755 SVIPQ8NHG7 77 aa8.33□□□□□ -1.08
VPS33B-208ENST00000574755 LCE6AA0A183 80 aa8.33□□□□□ -1.08
VPS33B-208ENST00000574755 LRP1BQ9NZR2 4599 aa8.32□□□□□ -1.08
VPS33B-208ENST00000574755 SACSQ9NZJ4 4579 aa8.3□□□□□ -1.08
VPS33B-208ENST00000574755 RPS28P62857 69 aaKnown RBP8.3□□□□□ -1.08
VPS33B-208ENST00000574755 C5orf47Q569G3 176 aa8.3□□□□□ -1.08
VPS33B-208ENST00000574755 MMP24-AS1A0A0U1RRL7 71 aa8.29□□□□□ -1.08
VPS33B-208ENST00000574755 SSBP3-AS1Q7Z2R9 100 aa8.28□□□□□ -1.08
VPS33B-208ENST00000574755 CDK2AP2O75956 126 aa8.27□□□□□ -1.09
VPS33B-208ENST00000574755 A0A087X002 238 aa8.26□□□□□ -1.09
VPS33B-208ENST00000574755 hDV103S1A0JD37 113 aa8.26□□□□□ -1.09
VPS33B-208ENST00000574755 PKHD1P08F94 4074 aa8.26□□□□□ -1.09
VPS33B-208ENST00000574755 CD164Q04900 197 aa8.25□□□□□ -1.09
VPS33B-208ENST00000574755 IGHV6-1A0A0B4J1U7 121 aa8.25□□□□□ -1.09
VPS33B-208ENST00000574755 A0A1B0GVX0 72 aa8.24□□□□□ -1.09
VPS33B-208ENST00000574755 LINC00336Q6ZUF6 198 aa8.24□□□□□ -1.09
VPS33B-208ENST00000574755 MP68P56378 58 aa8.24□□□□□ -1.09
VPS33B-208ENST00000574755 SPINK6Q6UWN8 80 aa8.24□□□□□ -1.09
VPS33B-208ENST00000574755 C8orf17Q9NRJ1 99 aa8.24□□□□□ -1.09
VPS33B-208ENST00000574755 ZCCHC13Q8WW36 166 aaKnown RBP8.23□□□□□ -1.09
VPS33B-208ENST00000574755 VPS13BQ7Z7G8 4022 aa8.23□□□□□ -1.09
VPS33B-208ENST00000574755 OXTP01178 125 aa8.22□□□□□ -1.09
VPS33B-208ENST00000574755 ATP5EP56381 51 aaPredicted RBP8.22□□□□□ -1.09
VPS33B-208ENST00000574755 KRTAP13-2Q52LG2 175 aa8.22□□□□□ -1.09
VPS33B-208ENST00000574755 FAM229BQ4G0N7 80 aa8.22□□□□□ -1.09
VPS33B-208ENST00000574755 SERP1Q9Y6X1 66 aa8.2□□□□□ -1.1
VPS33B-208ENST00000574755 H0Y9P7 68 aa8.2□□□□□ -1.1
VPS33B-208ENST00000574755 KRTAP1-4P0C5Y4 121 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 173.9 ms