RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 PCP4P48539 62 aa5.85□□□□□ -1.47
NPLOC4-216ENST00000574344 ELOF1P60002 83 aaKnown RBP5.85□□□□□ -1.47
NPLOC4-216ENST00000574344 LRP2P98164 4655 aa5.85□□□□□ -1.47
NPLOC4-216ENST00000574344 GAGE2AQ6NT46 116 aa5.85□□□□□ -1.47
NPLOC4-216ENST00000574344 CDIP1Q9H305 208 aa5.85□□□□□ -1.47
NPLOC4-216ENST00000574344 C22orf24Q9Y442 160 aa5.85□□□□□ -1.47
NPLOC4-216ENST00000574344 IGLV5-37A0A075B6J1 123 aa5.84□□□□□ -1.47
NPLOC4-216ENST00000574344 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.84□□□□□ -1.47
NPLOC4-216ENST00000574344 IGLV1-50A0A075B6I6 118 aa5.83□□□□□ -1.48
NPLOC4-216ENST00000574344 MRPL55Q7Z7F7 128 aaKnown RBP5.83□□□□□ -1.48
NPLOC4-216ENST00000574344 ETDCA0A1B0GVM5 59 aa5.82□□□□□ -1.48
NPLOC4-216ENST00000574344 Q6ZQY7 126 aa5.82□□□□□ -1.48
NPLOC4-216ENST00000574344 OBSCN-AS1Q96MR7 158 aa5.82□□□□□ -1.48
NPLOC4-216ENST00000574344 C14orf132Q9NPU4 83 aa5.82□□□□□ -1.48
NPLOC4-216ENST00000574344 LAMTOR3Q9UHA4 124 aa5.82□□□□□ -1.48
NPLOC4-216ENST00000574344 RPL37AP8A6NKH3 93 aa5.81□□□□□ -1.48
NPLOC4-216ENST00000574344 ZNF861PO60384 105 aa5.81□□□□□ -1.48
NPLOC4-216ENST00000574344 KCNQ1DNQ9H478 68 aa5.81□□□□□ -1.48
NPLOC4-216ENST00000574344 DHRS4-AS1Q9P1J3 65 aa5.81□□□□□ -1.48
NPLOC4-216ENST00000574344 KRTAP1-4P0C5Y4 121 aa5.8□□□□□ -1.48
NPLOC4-216ENST00000574344 PDE6GP18545 87 aa5.8□□□□□ -1.48
NPLOC4-216ENST00000574344 BCE1O60756 84 aa5.79□□□□□ -1.48
NPLOC4-216ENST00000574344 MT-ATP8P03928 68 aa5.79□□□□□ -1.48
NPLOC4-216ENST00000574344 RBM3P98179 157 aaKnown RBP5.79□□□□□ -1.48
NPLOC4-216ENST00000574344 LINC00643Q86TS7 51 aa5.79□□□□□ -1.48
NPLOC4-216ENST00000574344 DSCR8Q96T75 97 aa5.79□□□□□ -1.48
NPLOC4-216ENST00000574344 A0A1B0GV72 72 aa5.78□□□□□ -1.48
NPLOC4-216ENST00000574344 CCKP06307 115 aa5.78□□□□□ -1.48
NPLOC4-216ENST00000574344 UBE2AP49459 152 aa5.78□□□□□ -1.48
NPLOC4-216ENST00000574344 Q6ZRX8 168 aa5.78□□□□□ -1.48
NPLOC4-216ENST00000574344 Q6Q795 121 aa5.77□□□□□ -1.49
NPLOC4-216ENST00000574344 LOC110117498A0A087WWA1 95 aa5.76□□□□□ -1.49
NPLOC4-216ENST00000574344 ATP5EP2Q5VTU8 51 aa5.76□□□□□ -1.49
NPLOC4-216ENST00000574344 PRR4Q16378 134 aa5.75□□□□□ -1.49
NPLOC4-216ENST00000574344 UBL5Q9BZL1 73 aa5.75□□□□□ -1.49
NPLOC4-216ENST00000574344 IMUPQ9GZP8 106 aa5.75□□□□□ -1.49
NPLOC4-216ENST00000574344 TRBV7-7A0A0K0K1E9 115 aa5.74□□□□□ -1.49
NPLOC4-216ENST00000574344 B5MCH6 92 aa5.74□□□□□ -1.49
NPLOC4-216ENST00000574344 CRYGAP11844 174 aa5.74□□□□□ -1.49
NPLOC4-216ENST00000574344 SPRR1AP35321 89 aa5.74□□□□□ -1.49
NPLOC4-216ENST00000574344 TYMSOSQ8TAI1 123 aa5.74□□□□□ -1.49
NPLOC4-216ENST00000574344 LPAP08519 4548 aa5.73□□□□□ -1.49
NPLOC4-216ENST00000574344 A0A087X002 238 aa5.73□□□□□ -1.49
NPLOC4-216ENST00000574344 NDUFV3P56181 108 aaKnown RBP5.73□□□□□ -1.49
NPLOC4-216ENST00000574344 Q6JHZ5 121 aa5.73□□□□□ -1.49
NPLOC4-216ENST00000574344 FAM19A1Q7Z5A9 133 aa5.73□□□□□ -1.49
NPLOC4-216ENST00000574344 F8WEM9 126 aa5.72□□□□□ -1.49
NPLOC4-216ENST00000574344 PRLHP81277 87 aa5.72□□□□□ -1.49
NPLOC4-216ENST00000574344 Q6ZQT0 140 aa5.72□□□□□ -1.49
NPLOC4-216ENST00000574344 RNF213Q63HN8 5207 aa5.71□□□□□ -1.49
NPLOC4-216ENST00000574344 SMCR5Q8TEV8 140 aa5.71□□□□□ -1.5
NPLOC4-216ENST00000574344 ANAPC13Q9BS18 74 aa5.71□□□□□ -1.5
NPLOC4-216ENST00000574344 ANAPC11Q9NYG5 84 aa5.71□□□□□ -1.5
NPLOC4-216ENST00000574344 KRTAP13-1Q8IUC0 172 aa5.7□□□□□ -1.5
NPLOC4-216ENST00000574344 LINC00846Q9NV44 126 aa5.7□□□□□ -1.5
NPLOC4-216ENST00000574344 TRBV7-4A0A0J9YYF1 115 aa5.69□□□□□ -1.5
NPLOC4-216ENST00000574344 KRTAP4-16G5E9R7 235 aaPredicted RBP5.69□□□□□ -1.5
NPLOC4-216ENST00000574344 DEFB105AQ8NG35 78 aa5.69□□□□□ -1.5
NPLOC4-216ENST00000574344 FAM229BQ4G0N7 80 aa5.68□□□□□ -1.5
NPLOC4-216ENST00000574344 Q9BRP9 147 aa5.68□□□□□ -1.5
NPLOC4-216ENST00000574344 HIGD2AQ9BW72 106 aa5.68□□□□□ -1.5
NPLOC4-216ENST00000574344 IGLV5-48A0A075B6I7 105 aa5.67□□□□□ -1.5
NPLOC4-216ENST00000574344 KRTAP13-2Q52LG2 175 aa5.67□□□□□ -1.5
NPLOC4-216ENST00000574344 LINC00304Q8N9R0 145 aa5.67□□□□□ -1.5
NPLOC4-216ENST00000574344 FAM236AA0A1B0GUQ0 79 aa5.66□□□□□ -1.5
NPLOC4-216ENST00000574344 FAM236BA0A1B0GV22 79 aa5.66□□□□□ -1.5
NPLOC4-216ENST00000574344 A0A1B0GW54 56 aa5.66□□□□□ -1.5
NPLOC4-216ENST00000574344 IGKV3D-7A0A0C4DH55 119 aa5.65□□□□□ -1.5
NPLOC4-216ENST00000574344 ATOX1O00244 68 aa5.64□□□□□ -1.51
NPLOC4-216ENST00000574344 HIST1H4AP62805 103 aaKnown RBP5.64□□□□□ -1.51
NPLOC4-216ENST00000574344 Q8N377 158 aa5.64□□□□□ -1.51
NPLOC4-216ENST00000574344 RETNLBQ9BQ08 111 aa5.64□□□□□ -1.51
NPLOC4-216ENST00000574344 CXCL6P80162 114 aa5.63□□□□□ -1.51
NPLOC4-216ENST00000574344 Q6ZVQ6 151 aa5.63□□□□□ -1.51
NPLOC4-216ENST00000574344 ZNF706Q9Y5V0 76 aaPredicted RBP5.63□□□□□ -1.51
NPLOC4-216ENST00000574344 LINC01547P58512 204 aaPredicted RBP5.62□□□□□ -1.51
NPLOC4-216ENST00000574344 C3orf22Q8N5N4 141 aa5.62□□□□□ -1.51
NPLOC4-216ENST00000574344 ST20-AS1Q8NBB2 130 aa5.62□□□□□ -1.51
NPLOC4-216ENST00000574344 SPRR4Q96PI1 79 aa5.61□□□□□ -1.51
NPLOC4-216ENST00000574344 ERC2-IT1O76042 136 aa5.6□□□□□ -1.51
NPLOC4-216ENST00000574344 NREPQ16612 68 aa5.6□□□□□ -1.51
NPLOC4-216ENST00000574344 Q8NBF4 154 aa5.6□□□□□ -1.51
NPLOC4-216ENST00000574344 C4orf48Q5BLP8 95 aa5.59□□□□□ -1.51
NPLOC4-216ENST00000574344 IGLV7-46A0A075B6I9 117 aa5.57□□□□□ -1.52
NPLOC4-216ENST00000574344 A0A0U1RQV1 116 aa5.57□□□□□ -1.52
NPLOC4-216ENST00000574344 BPY2O14599 106 aa5.57□□□□□ -1.52
NPLOC4-216ENST00000574344 SPRR1BP22528 89 aa5.57□□□□□ -1.52
NPLOC4-216ENST00000574344 SPAG11AQ6PDA7 123 aa5.57□□□□□ -1.52
NPLOC4-216ENST00000574344 IGLV8-61A0A075B6I0 122 aa5.56□□□□□ -1.52
NPLOC4-216ENST00000574344 SMIM20Q8N5G0 67 aa5.56□□□□□ -1.52
NPLOC4-216ENST00000574344 A0A087WVE0 104 aa5.55□□□□□ -1.52
NPLOC4-216ENST00000574344 IGLV9-49A0A0B4J1Y8 123 aa5.55□□□□□ -1.52
NPLOC4-216ENST00000574344 TPRXLQ17RH7 258 aa5.54□□□□□ -1.52
NPLOC4-216ENST00000574344 IGFL1Q6UW32 110 aa5.54□□□□□ -1.52
NPLOC4-216ENST00000574344 SMIM29Q86T20 159 aa5.54□□□□□ -1.52
NPLOC4-216ENST00000574344 A0A1W2PNM2 257 aa5.53□□□□□ -1.52
NPLOC4-216ENST00000574344 UQCRQO14949 82 aa5.53□□□□□ -1.52
NPLOC4-216ENST00000574344 MOBPQ13875 183 aa5.53□□□□□ -1.52
NPLOC4-216ENST00000574344 C9orf153Q5TBE3 101 aa5.53□□□□□ -1.52
NPLOC4-216ENST00000574344 COX7CP15954 63 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms