RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 SEC61BP60468 96 aaKnown RBP9.89□□□□□ -0.83
CACNA1A-202ENST00000573710 ZCCHC13Q8WW36 166 aaKnown RBP9.88□□□□□ -0.83
CACNA1A-202ENST00000573710 SPATA8Q6RVD6 105 aa9.88□□□□□ -0.83
CACNA1A-202ENST00000573710 KRTAP16-1A8MUX0 517 aa9.87□□□□□ -0.83
CACNA1A-202ENST00000573710 CNBPP62633 177 aaKnown RBP9.86□□□□□ -0.83
CACNA1A-202ENST00000573710 Q75L30 129 aa9.86□□□□□ -0.83
CACNA1A-202ENST00000573710 LINC01558Q9Y6Z2 57 aa9.84□□□□□ -0.83
CACNA1A-202ENST00000573710 MKI67P46013 3256 aaKnown RBP9.81□□□□□ -0.84
CACNA1A-202ENST00000573710 Q8NDZ9 215 aa9.81□□□□□ -0.84
CACNA1A-202ENST00000573710 RPL37P61927 97 aaKnown RBP9.8□□□□□ -0.84
CACNA1A-202ENST00000573710 A0A0C4DFX4 3053 aa9.78□□□□□ -0.84
CACNA1A-202ENST00000573710 ATRQ13535 2644 aa9.77□□□□□ -0.84
CACNA1A-202ENST00000573710 CELSR3Q9NYQ7 3312 aa9.77□□□□□ -0.84
CACNA1A-202ENST00000573710 CEP295Q9C0D2 2601 aa9.77□□□□□ -0.85
CACNA1A-202ENST00000573710 OCR1Q9BZK8 76 aa9.74□□□□□ -0.85
CACNA1A-202ENST00000573710 Q5W150 140 aa9.73□□□□□ -0.85
CACNA1A-202ENST00000573710 BAHCC1Q9P281 2608 aa9.7□□□□□ -0.86
CACNA1A-202ENST00000573710 MAST4O15021 2626 aa9.68□□□□□ -0.86
CACNA1A-202ENST00000573710 Q5VV11 94 aa9.65□□□□□ -0.86
CACNA1A-202ENST00000573710 C10orf95Q9H7T3 257 aa9.64□□□□□ -0.87
CACNA1A-202ENST00000573710 RANBP2P49792 3224 aaKnown RBP9.64□□□□□ -0.87
CACNA1A-202ENST00000573710 NBEAL1Q6ZS30 2694 aa9.6□□□□□ -0.87
CACNA1A-202ENST00000573710 BRCA2P51587 3418 aa9.59□□□□□ -0.87
CACNA1A-202ENST00000573710 STAB2Q8WWQ8 2551 aa9.58□□□□□ -0.88
CACNA1A-202ENST00000573710 NDUFAF8A1L188 74 aa9.57□□□□□ -0.88
CACNA1A-202ENST00000573710 MMP24-AS1A0A0U1RRL7 71 aa9.57□□□□□ -0.88
CACNA1A-202ENST00000573710 ITPR3Q14573 2671 aa9.56□□□□□ -0.88
CACNA1A-202ENST00000573710 DNAH14Q0VDD8 3507 aa9.54□□□□□ -0.88
CACNA1A-202ENST00000573710 PLAC8Q9NZF1 115 aa9.52□□□□□ -0.89
CACNA1A-202ENST00000573710 FLNBO75369 2602 aaKnown RBP9.51□□□□□ -0.89
CACNA1A-202ENST00000573710 Q6ZR54 194 aa9.5□□□□□ -0.89
CACNA1A-202ENST00000573710 LAMA3Q16787 3333 aa9.49□□□□□ -0.89
CACNA1A-202ENST00000573710 CHD6Q8TD26 2715 aa9.49□□□□□ -0.89
CACNA1A-202ENST00000573710 KRTAP10-1P60331 282 aa9.47□□□□□ -0.89
CACNA1A-202ENST00000573710 PRUNE2Q8WUY3 3088 aa9.47□□□□□ -0.89
CACNA1A-202ENST00000573710 KRTAP10-2P60368 255 aa9.47□□□□□ -0.89
CACNA1A-202ENST00000573710 A8MU10 97 aa9.47□□□□□ -0.89
CACNA1A-202ENST00000573710 HELZ2Q9BYK8 2649 aaKnown RBP9.46□□□□□ -0.89
CACNA1A-202ENST00000573710 CYSTM1Q9H1C7 97 aa9.46□□□□□ -0.89
CACNA1A-202ENST00000573710 CENPEQ02224 2701 aa9.46□□□□□ -0.89
CACNA1A-202ENST00000573710 NOTCH1P46531 2555 aa9.46□□□□□ -0.89
CACNA1A-202ENST00000573710 A8MUU9 505 aa9.46□□□□□ -0.9
CACNA1A-202ENST00000573710 Q5XG85 94 aa9.46□□□□□ -0.9
CACNA1A-202ENST00000573710 UNC80Q8N2C7 3258 aa9.45□□□□□ -0.9
CACNA1A-202ENST00000573710 A0A096LNT2 108 aa9.45□□□□□ -0.9
CACNA1A-202ENST00000573710 OXTP01178 125 aa9.44□□□□□ -0.9
CACNA1A-202ENST00000573710 TRIOO75962 3097 aa9.43□□□□□ -0.9
CACNA1A-202ENST00000573710 CDH23Q9H251 3354 aa9.41□□□□□ -0.9
CACNA1A-202ENST00000573710 HTTP42858 3142 aa9.4□□□□□ -0.9
CACNA1A-202ENST00000573710 KRTAP1-3Q8IUG1 177 aa9.39□□□□□ -0.91
CACNA1A-202ENST00000573710 COL6A5A8TX70 2615 aa9.39□□□□□ -0.91
CACNA1A-202ENST00000573710 TEX15Q9BXT5 2789 aa9.39□□□□□ -0.91
CACNA1A-202ENST00000573710 P0C880 135 aa9.38□□□□□ -0.91
CACNA1A-202ENST00000573710 FLNAP21333 2647 aaKnown RBP9.37□□□□□ -0.91
CACNA1A-202ENST00000573710 SPRR1BP22528 89 aa9.37□□□□□ -0.91
CACNA1A-202ENST00000573710 VPS13AQ96RL7 3174 aa9.37□□□□□ -0.91
CACNA1A-202ENST00000573710 SZT2Q5T011 3432 aa9.34□□□□□ -0.91
CACNA1A-202ENST00000573710 LCE6AA0A183 80 aa9.34□□□□□ -0.91
CACNA1A-202ENST00000573710 CRYBG3Q68DQ2 2970 aa9.34□□□□□ -0.91
CACNA1A-202ENST00000573710 CHD7Q9P2D1 2997 aa9.34□□□□□ -0.91
CACNA1A-202ENST00000573710 PANO1I0J062 215 aa9.33□□□□□ -0.92
CACNA1A-202ENST00000573710 KRTAP1-1Q07627 177 aa9.32□□□□□ -0.92
CACNA1A-202ENST00000573710 LINC00472Q9H8W2 130 aa9.29□□□□□ -0.92
CACNA1A-202ENST00000573710 KRTAP25-1Q3LHN0 102 aa9.27□□□□□ -0.93
CACNA1A-202ENST00000573710 KRTAP26-1Q6PEX3 210 aa9.27□□□□□ -0.93
CACNA1A-202ENST00000573710 TNP1P09430 55 aa9.26□□□□□ -0.93
CACNA1A-202ENST00000573710 NSD1Q96L73 2696 aaPredicted RBP9.26□□□□□ -0.93
CACNA1A-202ENST00000573710 KRTAP10-8P60410 259 aa9.25□□□□□ -0.93
CACNA1A-202ENST00000573710 KRTAP1-5Q9BYS1 174 aa9.25□□□□□ -0.93
CACNA1A-202ENST00000573710 SPEGQ15772 3267 aa9.23□□□□□ -0.93
CACNA1A-202ENST00000573710 A0A087X002 238 aa9.21□□□□□ -0.93
CACNA1A-202ENST00000573710 A0A1B0GVY2 172 aa9.21□□□□□ -0.94
CACNA1A-202ENST00000573710 UNC79Q9P2D8 2635 aa9.2□□□□□ -0.94
CACNA1A-202ENST00000573710 FRYQ5TBA9 3013 aa9.19□□□□□ -0.94
CACNA1A-202ENST00000573710 WDFY4Q6ZS81 3184 aa9.19□□□□□ -0.94
CACNA1A-202ENST00000573710 MGAQ8IWI9 3026 aa9.19□□□□□ -0.94
CACNA1A-202ENST00000573710 DSPP15924 2871 aaKnown RBP9.18□□□□□ -0.94
CACNA1A-202ENST00000573710 TEP1Q99973 2627 aaKnown RBP9.18□□□□□ -0.94
CACNA1A-202ENST00000573710 CFAP47Q6ZTR5 3102 aa9.16□□□□□ -0.94
CACNA1A-202ENST00000573710 COL6A3P12111 3177 aa9.13□□□□□ -0.95
CACNA1A-202ENST00000573710 SPRR1AP35321 89 aa9.1□□□□□ -0.95
CACNA1A-202ENST00000573710 ASH1LQ9NR48 2969 aaKnown RBP9.1□□□□□ -0.95
CACNA1A-202ENST00000573710 SETXQ7Z333 2677 aaKnown RBP9.09□□□□□ -0.95
CACNA1A-202ENST00000573710 NOTCH2NLQ7Z3S9 236 aa9.08□□□□□ -0.96
CACNA1A-202ENST00000573710 VCANP13611 3396 aa9.07□□□□□ -0.96
CACNA1A-202ENST00000573710 TRANK1O15050 2925 aa9.05□□□□□ -0.96
CACNA1A-202ENST00000573710 APCP25054 2843 aa9.02□□□□□ -0.97
CACNA1A-202ENST00000573710 KMT2BQ9UMN6 2715 aaPredicted RBP9□□□□□ -0.97
CACNA1A-202ENST00000573710 LAMA1P25391 3075 aa8.96□□□□□ -0.97
CACNA1A-202ENST00000573710 COL12A1Q99715 3063 aa8.96□□□□□ -0.97
CACNA1A-202ENST00000573710 IGSF10Q6WRI0 2623 aa8.95□□□□□ -0.98
CACNA1A-202ENST00000573710 ATMQ13315 3056 aa8.92□□□□□ -0.98
CACNA1A-202ENST00000573710 KALRNO60229 2985 aa8.9□□□□□ -0.98
CACNA1A-202ENST00000573710 DMXL2Q8TDJ6 3036 aa8.89□□□□□ -0.99
CACNA1A-202ENST00000573710 GCN1Q92616 2671 aaKnown RBP8.89□□□□□ -0.99
CACNA1A-202ENST00000573710 ASPMQ8IZT6 3477 aa8.88□□□□□ -0.99
CACNA1A-202ENST00000573710 ITPR2Q14571 2701 aa8.86□□□□□ -0.99
CACNA1A-202ENST00000573710 MYO15AQ9UKN7 3530 aa8.85□□□□□ -0.99
CACNA1A-202ENST00000573710 MAP1AP78559 2803 aaPredicted RBP8.85□□□□□ -0.99
CACNA1A-202ENST00000573710 SPTBN5Q9NRC6 3674 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms