RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 SEC61BP60468 96 aaKnown RBP9.89□□□□□ -0.83
CACNA1A-202ENST00000573710 ZCCHC13Q8WW36 166 aaKnown RBP9.88□□□□□ -0.83
CACNA1A-202ENST00000573710 SPATA8Q6RVD6 105 aa9.88□□□□□ -0.83
CACNA1A-202ENST00000573710 KRTAP16-1A8MUX0 517 aa9.87□□□□□ -0.83
CACNA1A-202ENST00000573710 CNBPP62633 177 aaKnown RBP9.86□□□□□ -0.83
CACNA1A-202ENST00000573710 Q75L30 129 aa9.86□□□□□ -0.83
CACNA1A-202ENST00000573710 LINC01558Q9Y6Z2 57 aa9.84□□□□□ -0.83
CACNA1A-202ENST00000573710 MKI67P46013 3256 aaKnown RBP9.81□□□□□ -0.84
CACNA1A-202ENST00000573710 Q8NDZ9 215 aa9.81□□□□□ -0.84
CACNA1A-202ENST00000573710 RPL37P61927 97 aaKnown RBP9.8□□□□□ -0.84
CACNA1A-202ENST00000573710 A0A0C4DFX4 3053 aa9.78□□□□□ -0.84
CACNA1A-202ENST00000573710 ATRQ13535 2644 aa9.77□□□□□ -0.84
CACNA1A-202ENST00000573710 CELSR3Q9NYQ7 3312 aa9.77□□□□□ -0.84
CACNA1A-202ENST00000573710 CEP295Q9C0D2 2601 aa9.77□□□□□ -0.85
CACNA1A-202ENST00000573710 OCR1Q9BZK8 76 aa9.74□□□□□ -0.85
CACNA1A-202ENST00000573710 Q5W150 140 aa9.73□□□□□ -0.85
CACNA1A-202ENST00000573710 BAHCC1Q9P281 2608 aa9.7□□□□□ -0.86
CACNA1A-202ENST00000573710 MAST4O15021 2626 aa9.68□□□□□ -0.86
CACNA1A-202ENST00000573710 Q5VV11 94 aa9.65□□□□□ -0.86
CACNA1A-202ENST00000573710 C10orf95Q9H7T3 257 aa9.64□□□□□ -0.87
CACNA1A-202ENST00000573710 RANBP2P49792 3224 aaKnown RBP9.64□□□□□ -0.87
CACNA1A-202ENST00000573710 NBEAL1Q6ZS30 2694 aa9.6□□□□□ -0.87
CACNA1A-202ENST00000573710 BRCA2P51587 3418 aa9.59□□□□□ -0.87
CACNA1A-202ENST00000573710 STAB2Q8WWQ8 2551 aa9.58□□□□□ -0.88
CACNA1A-202ENST00000573710 NDUFAF8A1L188 74 aa9.57□□□□□ -0.88
CACNA1A-202ENST00000573710 MMP24-AS1A0A0U1RRL7 71 aa9.57□□□□□ -0.88
CACNA1A-202ENST00000573710 ITPR3Q14573 2671 aa9.56□□□□□ -0.88
CACNA1A-202ENST00000573710 DNAH14Q0VDD8 3507 aa9.54□□□□□ -0.88
CACNA1A-202ENST00000573710 PLAC8Q9NZF1 115 aa9.52□□□□□ -0.89
CACNA1A-202ENST00000573710 FLNBO75369 2602 aaKnown RBP9.51□□□□□ -0.89
CACNA1A-202ENST00000573710 Q6ZR54 194 aa9.5□□□□□ -0.89
CACNA1A-202ENST00000573710 LAMA3Q16787 3333 aa9.49□□□□□ -0.89
CACNA1A-202ENST00000573710 CHD6Q8TD26 2715 aa9.49□□□□□ -0.89
CACNA1A-202ENST00000573710 KRTAP10-1P60331 282 aa9.47□□□□□ -0.89
CACNA1A-202ENST00000573710 PRUNE2Q8WUY3 3088 aa9.47□□□□□ -0.89
CACNA1A-202ENST00000573710 KRTAP10-2P60368 255 aa9.47□□□□□ -0.89
CACNA1A-202ENST00000573710 A8MU10 97 aa9.47□□□□□ -0.89
CACNA1A-202ENST00000573710 HELZ2Q9BYK8 2649 aaKnown RBP9.46□□□□□ -0.89
CACNA1A-202ENST00000573710 CYSTM1Q9H1C7 97 aa9.46□□□□□ -0.89
CACNA1A-202ENST00000573710 CENPEQ02224 2701 aa9.46□□□□□ -0.89
CACNA1A-202ENST00000573710 NOTCH1P46531 2555 aa9.46□□□□□ -0.89
CACNA1A-202ENST00000573710 A8MUU9 505 aa9.46□□□□□ -0.9
CACNA1A-202ENST00000573710 Q5XG85 94 aa9.46□□□□□ -0.9
CACNA1A-202ENST00000573710 UNC80Q8N2C7 3258 aa9.45□□□□□ -0.9
CACNA1A-202ENST00000573710 A0A096LNT2 108 aa9.45□□□□□ -0.9
CACNA1A-202ENST00000573710 OXTP01178 125 aa9.44□□□□□ -0.9
CACNA1A-202ENST00000573710 TRIOO75962 3097 aa9.43□□□□□ -0.9
CACNA1A-202ENST00000573710 CDH23Q9H251 3354 aa9.41□□□□□ -0.9
CACNA1A-202ENST00000573710 HTTP42858 3142 aa9.4□□□□□ -0.9
CACNA1A-202ENST00000573710 KRTAP1-3Q8IUG1 177 aa9.39□□□□□ -0.91
CACNA1A-202ENST00000573710 COL6A5A8TX70 2615 aa9.39□□□□□ -0.91
CACNA1A-202ENST00000573710 TEX15Q9BXT5 2789 aa9.39□□□□□ -0.91
CACNA1A-202ENST00000573710 P0C880 135 aa9.38□□□□□ -0.91
CACNA1A-202ENST00000573710 FLNAP21333 2647 aaKnown RBP9.37□□□□□ -0.91
CACNA1A-202ENST00000573710 SPRR1BP22528 89 aa9.37□□□□□ -0.91
CACNA1A-202ENST00000573710 VPS13AQ96RL7 3174 aa9.37□□□□□ -0.91
CACNA1A-202ENST00000573710 SZT2Q5T011 3432 aa9.34□□□□□ -0.91
CACNA1A-202ENST00000573710 LCE6AA0A183 80 aa9.34□□□□□ -0.91
CACNA1A-202ENST00000573710 CRYBG3Q68DQ2 2970 aa9.34□□□□□ -0.91
CACNA1A-202ENST00000573710 CHD7Q9P2D1 2997 aa9.34□□□□□ -0.91
CACNA1A-202ENST00000573710 PANO1I0J062 215 aa9.33□□□□□ -0.92
CACNA1A-202ENST00000573710 KRTAP1-1Q07627 177 aa9.32□□□□□ -0.92
CACNA1A-202ENST00000573710 LINC00472Q9H8W2 130 aa9.29□□□□□ -0.92
CACNA1A-202ENST00000573710 KRTAP25-1Q3LHN0 102 aa9.27□□□□□ -0.93
CACNA1A-202ENST00000573710 KRTAP26-1Q6PEX3 210 aa9.27□□□□□ -0.93
CACNA1A-202ENST00000573710 TNP1P09430 55 aa9.26□□□□□ -0.93
CACNA1A-202ENST00000573710 NSD1Q96L73 2696 aaPredicted RBP9.26□□□□□ -0.93
CACNA1A-202ENST00000573710 KRTAP10-8P60410 259 aa9.25□□□□□ -0.93
CACNA1A-202ENST00000573710 KRTAP1-5Q9BYS1 174 aa9.25□□□□□ -0.93
CACNA1A-202ENST00000573710 SPEGQ15772 3267 aa9.23□□□□□ -0.93
CACNA1A-202ENST00000573710 A0A087X002 238 aa9.21□□□□□ -0.93
CACNA1A-202ENST00000573710 A0A1B0GVY2 172 aa9.21□□□□□ -0.94
CACNA1A-202ENST00000573710 UNC79Q9P2D8 2635 aa9.2□□□□□ -0.94
CACNA1A-202ENST00000573710 FRYQ5TBA9 3013 aa9.19□□□□□ -0.94
CACNA1A-202ENST00000573710 WDFY4Q6ZS81 3184 aa9.19□□□□□ -0.94
CACNA1A-202ENST00000573710 MGAQ8IWI9 3026 aa9.19□□□□□ -0.94
CACNA1A-202ENST00000573710 DSPP15924 2871 aaKnown RBP9.18□□□□□ -0.94
CACNA1A-202ENST00000573710 TEP1Q99973 2627 aaKnown RBP9.18□□□□□ -0.94
CACNA1A-202ENST00000573710 CFAP47Q6ZTR5 3102 aa9.16□□□□□ -0.94
CACNA1A-202ENST00000573710 COL6A3P12111 3177 aa9.13□□□□□ -0.95
CACNA1A-202ENST00000573710 SPRR1AP35321 89 aa9.1□□□□□ -0.95
CACNA1A-202ENST00000573710 ASH1LQ9NR48 2969 aaKnown RBP9.1□□□□□ -0.95
CACNA1A-202ENST00000573710 SETXQ7Z333 2677 aaKnown RBP9.09□□□□□ -0.95
CACNA1A-202ENST00000573710 NOTCH2NLQ7Z3S9 236 aa9.08□□□□□ -0.96
CACNA1A-202ENST00000573710 VCANP13611 3396 aa9.07□□□□□ -0.96
CACNA1A-202ENST00000573710 TRANK1O15050 2925 aa9.05□□□□□ -0.96
CACNA1A-202ENST00000573710 APCP25054 2843 aa9.02□□□□□ -0.97
CACNA1A-202ENST00000573710 KMT2BQ9UMN6 2715 aaPredicted RBP9□□□□□ -0.97
CACNA1A-202ENST00000573710 LAMA1P25391 3075 aa8.96□□□□□ -0.97
CACNA1A-202ENST00000573710 COL12A1Q99715 3063 aa8.96□□□□□ -0.97
CACNA1A-202ENST00000573710 IGSF10Q6WRI0 2623 aa8.95□□□□□ -0.98
CACNA1A-202ENST00000573710 ATMQ13315 3056 aa8.92□□□□□ -0.98
CACNA1A-202ENST00000573710 KALRNO60229 2985 aa8.9□□□□□ -0.98
CACNA1A-202ENST00000573710 DMXL2Q8TDJ6 3036 aa8.89□□□□□ -0.99
CACNA1A-202ENST00000573710 GCN1Q92616 2671 aaKnown RBP8.89□□□□□ -0.99
CACNA1A-202ENST00000573710 ASPMQ8IZT6 3477 aa8.88□□□□□ -0.99
CACNA1A-202ENST00000573710 ITPR2Q14571 2701 aa8.86□□□□□ -0.99
CACNA1A-202ENST00000573710 MYO15AQ9UKN7 3530 aa8.85□□□□□ -0.99
CACNA1A-202ENST00000573710 MAP1AP78559 2803 aaPredicted RBP8.85□□□□□ -0.99
CACNA1A-202ENST00000573710 SPTBN5Q9NRC6 3674 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms