RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 SPRR4Q96PI1 79 aa11.34□□□□□ -0.59
COMMD4-213ENST00000565834 CDIP1Q9H305 208 aa11.34□□□□□ -0.59
COMMD4-213ENST00000565834 NDUFV3P56181 108 aaKnown RBP11.33□□□□□ -0.6
COMMD4-213ENST00000565834 FAM240AA0A1B0GVK7 77 aa11.32□□□□□ -0.6
COMMD4-213ENST00000565834 SPRR1BP22528 89 aa11.32□□□□□ -0.6
COMMD4-213ENST00000565834 A0A1B0GV72 72 aa11.31□□□□□ -0.6
COMMD4-213ENST00000565834 C3orf22Q8N5N4 141 aa11.31□□□□□ -0.6
COMMD4-213ENST00000565834 HSPG2P98160 4391 aa11.3□□□□□ -0.6
COMMD4-213ENST00000565834 FAT1Q14517 4588 aa11.3□□□□□ -0.6
COMMD4-213ENST00000565834 JMJD7-PLA2G4BH0Y9G9 81 aa11.3□□□□□ -0.6
COMMD4-213ENST00000565834 FAM229AH3BQW9 127 aa11.3□□□□□ -0.6
COMMD4-213ENST00000565834 RYR1P21817 5038 aa11.29□□□□□ -0.6
COMMD4-213ENST00000565834 PLA2G1BP04054 148 aaKnown RBP11.29□□□□□ -0.6
COMMD4-213ENST00000565834 KRTAP10-4P60372 401 aaPredicted RBP11.29□□□□□ -0.6
COMMD4-213ENST00000565834 SMIM29Q86T20 159 aa11.29□□□□□ -0.6
COMMD4-213ENST00000565834 ACYP1P07311 99 aa11.28□□□□□ -0.6
COMMD4-213ENST00000565834 LINC00483Q53H64 154 aa11.28□□□□□ -0.6
COMMD4-213ENST00000565834 OBSCN-AS1Q96MR7 158 aa11.28□□□□□ -0.6
COMMD4-213ENST00000565834 F8WEM9 126 aa11.27□□□□□ -0.61
COMMD4-213ENST00000565834 SPINK6Q6UWN8 80 aa11.27□□□□□ -0.61
COMMD4-213ENST00000565834 RBM3P98179 157 aaKnown RBP11.26□□□□□ -0.61
COMMD4-213ENST00000565834 KIAA1109Q2LD37 5005 aa11.25□□□□□ -0.61
COMMD4-213ENST00000565834 Q5VSD8 79 aa11.24□□□□□ -0.61
COMMD4-213ENST00000565834 C14orf132Q9NPU4 83 aa11.24□□□□□ -0.61
COMMD4-213ENST00000565834 ANAPC11Q9NYG5 84 aa11.23□□□□□ -0.61
COMMD4-213ENST00000565834 DSCR8Q96T75 97 aa11.21□□□□□ -0.61
COMMD4-213ENST00000565834 MT-ATP8P03928 68 aa11.2□□□□□ -0.62
COMMD4-213ENST00000565834 Q6Q795 121 aa11.2□□□□□ -0.62
COMMD4-213ENST00000565834 IGLV8-61A0A075B6I0 122 aa11.18□□□□□ -0.62
COMMD4-213ENST00000565834 IGLV9-49A0A0B4J1Y8 123 aa11.18□□□□□ -0.62
COMMD4-213ENST00000565834 TRBV7-4A0A0J9YYF1 115 aa11.18□□□□□ -0.62
COMMD4-213ENST00000565834 LOC110117498A0A087WWA1 95 aa11.17□□□□□ -0.62
COMMD4-213ENST00000565834 KRTAP1-4P0C5Y4 121 aa11.17□□□□□ -0.62
COMMD4-213ENST00000565834 C9orf153Q5TBE3 101 aa11.17□□□□□ -0.62
COMMD4-213ENST00000565834 Q8N1X5 172 aa11.17□□□□□ -0.62
COMMD4-213ENST00000565834 PDE6GP18545 87 aa11.16□□□□□ -0.62
COMMD4-213ENST00000565834 FAM229BQ4G0N7 80 aa11.16□□□□□ -0.62
COMMD4-213ENST00000565834 Q6ZQT0 140 aa11.15□□□□□ -0.62
COMMD4-213ENST00000565834 Q6JHZ5 121 aa11.14□□□□□ -0.63
COMMD4-213ENST00000565834 KRTAP17-1Q9BYP8 105 aa11.14□□□□□ -0.63
COMMD4-213ENST00000565834 PKHD1L1Q86WI1 4243 aa11.13□□□□□ -0.63
COMMD4-213ENST00000565834 HERC2O95714 4834 aa11.13□□□□□ -0.63
COMMD4-213ENST00000565834 MOBPQ13875 183 aa11.13□□□□□ -0.63
COMMD4-213ENST00000565834 Q8NBF4 154 aa11.13□□□□□ -0.63
COMMD4-213ENST00000565834 CCKP06307 115 aa11.12□□□□□ -0.63
COMMD4-213ENST00000565834 IGFL1Q6UW32 110 aa11.12□□□□□ -0.63
COMMD4-213ENST00000565834 A0A087X002 238 aa11.11□□□□□ -0.63
COMMD4-213ENST00000565834 CRYGAP11844 174 aa11.11□□□□□ -0.63
COMMD4-213ENST00000565834 IMUPQ9GZP8 106 aa11.1□□□□□ -0.63
COMMD4-213ENST00000565834 A0A0G2JQZ4 141 aa11.09□□□□□ -0.63
COMMD4-213ENST00000565834 KRTAP13-2Q52LG2 175 aa11.08□□□□□ -0.64
COMMD4-213ENST00000565834 LINC00643Q86TS7 51 aa11.07□□□□□ -0.64
COMMD4-213ENST00000565834 A0A1W2PNM2 257 aa11.06□□□□□ -0.64
COMMD4-213ENST00000565834 TRBV7-7A0A0K0K1E9 115 aa11.05□□□□□ -0.64
COMMD4-213ENST00000565834 SSBP3-AS1Q7Z2R9 100 aa11.05□□□□□ -0.64
COMMD4-213ENST00000565834 PRR26Q8N8Z3 221 aa11.02□□□□□ -0.64
COMMD4-213ENST00000565834 ANAPC13Q9BS18 74 aa11.01□□□□□ -0.65
COMMD4-213ENST00000565834 TYMSOSQ8TAI1 123 aa11.01□□□□□ -0.65
COMMD4-213ENST00000565834 A0A1B0GW54 56 aa10.98□□□□□ -0.65
COMMD4-213ENST00000565834 HRCT1Q6UXD1 115 aa10.97□□□□□ -0.65
COMMD4-213ENST00000565834 LINC00846Q9NV44 126 aa10.96□□□□□ -0.65
COMMD4-213ENST00000565834 FLG2Q5D862 2391 aaPredicted RBP10.94□□□□□ -0.66
COMMD4-213ENST00000565834 CD164Q04900 197 aa10.94□□□□□ -0.66
COMMD4-213ENST00000565834 A0A087WSZ3 146 aa10.93□□□□□ -0.66
COMMD4-213ENST00000565834 KRTAP4-5Q9BYR2 181 aa10.92□□□□□ -0.66
COMMD4-213ENST00000565834 UBL5Q9BZL1 73 aa10.91□□□□□ -0.66
COMMD4-213ENST00000565834 C4orf48Q5BLP8 95 aa10.89□□□□□ -0.67
COMMD4-213ENST00000565834 LINC00304Q8N9R0 145 aa10.89□□□□□ -0.67
COMMD4-213ENST00000565834 ATP5EP2Q5VTU8 51 aa10.88□□□□□ -0.67
COMMD4-213ENST00000565834 NREPQ16612 68 aa10.87□□□□□ -0.67
COMMD4-213ENST00000565834 Q6ZVQ6 151 aa10.87□□□□□ -0.67
COMMD4-213ENST00000565834 LRP1Q07954 4544 aaKnown RBP10.87□□□□□ -0.67
COMMD4-213ENST00000565834 SS18L2Q9UHA2 77 aa10.86□□□□□ -0.67
COMMD4-213ENST00000565834 FAT3Q8TDW7 4589 aa10.85□□□□□ -0.67
COMMD4-213ENST00000565834 ABCA13Q86UQ4 5058 aa10.85□□□□□ -0.67
COMMD4-213ENST00000565834 KRTAP10-8P60410 259 aa10.84□□□□□ -0.67
COMMD4-213ENST00000565834 SPAG11AQ6PDA7 123 aa10.84□□□□□ -0.67
COMMD4-213ENST00000565834 SPINK1P00995 79 aa10.83□□□□□ -0.68
COMMD4-213ENST00000565834 FAM236AA0A1B0GUQ0 79 aa10.82□□□□□ -0.68
COMMD4-213ENST00000565834 FAM236BA0A1B0GV22 79 aa10.82□□□□□ -0.68
COMMD4-213ENST00000565834 MYCBP2O75592 4640 aa10.8□□□□□ -0.68
COMMD4-213ENST00000565834 LIMD2Q9BT23 127 aa10.8□□□□□ -0.68
COMMD4-213ENST00000565834 OXTP01178 125 aa10.79□□□□□ -0.68
COMMD4-213ENST00000565834 TNXBP22105 4242 aa10.79□□□□□ -0.68
COMMD4-213ENST00000565834 ATOX1O00244 68 aa10.78□□□□□ -0.68
COMMD4-213ENST00000565834 RPS29P62273 56 aaKnown RBP10.78□□□□□ -0.68
COMMD4-213ENST00000565834 Q5XG85 94 aa10.78□□□□□ -0.68
COMMD4-213ENST00000565834 SVIPQ8NHG7 77 aa10.78□□□□□ -0.68
COMMD4-213ENST00000565834 PCLOQ9Y6V0 5065 aa10.76□□□□□ -0.69
COMMD4-213ENST00000565834 HIST1H4AP62805 103 aaKnown RBP10.76□□□□□ -0.69
COMMD4-213ENST00000565834 LINC00472Q9H8W2 130 aa10.76□□□□□ -0.69
COMMD4-213ENST00000565834 BPY2O14599 106 aa10.75□□□□□ -0.69
COMMD4-213ENST00000565834 MT1HL1P0DM35 61 aa10.75□□□□□ -0.69
COMMD4-213ENST00000565834 ASB16-AS1Q495Z4 193 aa10.75□□□□□ -0.69
COMMD4-213ENST00000565834 IGKV3D-7A0A0C4DH55 119 aa10.73□□□□□ -0.69
COMMD4-213ENST00000565834 DEFB116Q30KQ4 102 aa10.73□□□□□ -0.69
COMMD4-213ENST00000565834 Q96NJ1 140 aa10.73□□□□□ -0.69
COMMD4-213ENST00000565834 CXCL6P80162 114 aa10.72□□□□□ -0.69
COMMD4-213ENST00000565834 KRTAP29-1A8MX34 341 aaPredicted RBP10.71□□□□□ -0.69
COMMD4-213ENST00000565834 UQCRQO14949 82 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms