RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 H0Y9J4 135 aa11.83□□□□□ -0.52
SMPD3-203ENST00000563226 UBE2AP49459 152 aa11.82□□□□□ -0.52
SMPD3-203ENST00000563226 A0A0G2JQZ4 141 aa11.82□□□□□ -0.52
SMPD3-203ENST00000563226 BCE1O60756 84 aa11.81□□□□□ -0.52
SMPD3-203ENST00000563226 CXCL6P80162 114 aa11.81□□□□□ -0.52
SMPD3-203ENST00000563226 IGLV5-52A0A0A0MRZ9 124 aa11.8□□□□□ -0.52
SMPD3-203ENST00000563226 KRTAP13-1Q8IUC0 172 aa11.8□□□□□ -0.52
SMPD3-203ENST00000563226 Q8NBF4 154 aa11.8□□□□□ -0.52
SMPD3-203ENST00000563226 ATOX1O00244 68 aa11.79□□□□□ -0.52
SMPD3-203ENST00000563226 F8WEM9 126 aa11.78□□□□□ -0.52
SMPD3-203ENST00000563226 NREPQ16612 68 aa11.77□□□□□ -0.52
SMPD3-203ENST00000563226 IGFL1Q6UW32 110 aa11.76□□□□□ -0.53
SMPD3-203ENST00000563226 SPRR4Q96PI1 79 aa11.75□□□□□ -0.53
SMPD3-203ENST00000563226 SVIPQ8NHG7 77 aa11.74□□□□□ -0.53
SMPD3-203ENST00000563226 PLAC8Q9NZF1 115 aa11.74□□□□□ -0.53
SMPD3-203ENST00000563226 SPRR1BP22528 89 aa11.74□□□□□ -0.53
SMPD3-203ENST00000563226 FAT2Q9NYQ8 4349 aa11.74□□□□□ -0.53
SMPD3-203ENST00000563226 IGLV8-61A0A075B6I0 122 aa11.72□□□□□ -0.53
SMPD3-203ENST00000563226 Q8N9L7 120 aa11.72□□□□□ -0.53
SMPD3-203ENST00000563226 A0A1B0GW54 56 aa11.71□□□□□ -0.53
SMPD3-203ENST00000563226 PSORS1C2Q9UIG4 136 aa11.71□□□□□ -0.54
SMPD3-203ENST00000563226 PKD1P98161 4303 aa11.7□□□□□ -0.54
SMPD3-203ENST00000563226 CRYGAP11844 174 aa11.7□□□□□ -0.54
SMPD3-203ENST00000563226 COX7CP15954 63 aa11.7□□□□□ -0.54
SMPD3-203ENST00000563226 KRTAP10-2P60368 255 aa11.7□□□□□ -0.54
SMPD3-203ENST00000563226 BPY2O14599 106 aa11.69□□□□□ -0.54
SMPD3-203ENST00000563226 UQCRQO14949 82 aa11.68□□□□□ -0.54
SMPD3-203ENST00000563226 IGKV4-1P06312 121 aa11.67□□□□□ -0.54
SMPD3-203ENST00000563226 SERP2Q8N6R1 65 aa11.66□□□□□ -0.54
SMPD3-203ENST00000563226 SACSQ9NZJ4 4579 aa11.65□□□□□ -0.55
SMPD3-203ENST00000563226 C9orf153Q5TBE3 101 aa11.64□□□□□ -0.55
SMPD3-203ENST00000563226 FAM30AQ9NZY2 134 aa11.63□□□□□ -0.55
SMPD3-203ENST00000563226 A0A087WSZ3 146 aa11.61□□□□□ -0.55
SMPD3-203ENST00000563226 DSCR10P59022 87 aa11.58□□□□□ -0.56
SMPD3-203ENST00000563226 CYSTM1Q9H1C7 97 aa11.58□□□□□ -0.56
SMPD3-203ENST00000563226 SS18L2Q9UHA2 77 aa11.58□□□□□ -0.56
SMPD3-203ENST00000563226 ZNF861PO60384 105 aa11.57□□□□□ -0.56
SMPD3-203ENST00000563226 LINC00483Q53H64 154 aa11.56□□□□□ -0.56
SMPD3-203ENST00000563226 CIRBP-AS1Q8TBR5 109 aa11.56□□□□□ -0.56
SMPD3-203ENST00000563226 IGLV9-49A0A0B4J1Y8 123 aa11.56□□□□□ -0.56
SMPD3-203ENST00000563226 DEFB116Q30KQ4 102 aa11.55□□□□□ -0.56
SMPD3-203ENST00000563226 LRP1BQ9NZR2 4599 aa11.54□□□□□ -0.56
SMPD3-203ENST00000563226 KRTAP10-1P60331 282 aa11.54□□□□□ -0.56
SMPD3-203ENST00000563226 ANAPC11Q9NYG5 84 aa11.54□□□□□ -0.56
SMPD3-203ENST00000563226 K7EQZ3 153 aa11.53□□□□□ -0.56
SMPD3-203ENST00000563226 TRAV7A0A075B6U4 112 aa11.52□□□□□ -0.57
SMPD3-203ENST00000563226 ZNF706Q9Y5V0 76 aaPredicted RBP11.51□□□□□ -0.57
SMPD3-203ENST00000563226 IGLV7-43P04211 117 aa11.51□□□□□ -0.57
SMPD3-203ENST00000563226 Q6ZSA8 131 aa11.5□□□□□ -0.57
SMPD3-203ENST00000563226 SMIM20Q8N5G0 67 aa11.47□□□□□ -0.57
SMPD3-203ENST00000563226 C20orf197Q8N268 126 aa11.46□□□□□ -0.57
SMPD3-203ENST00000563226 MOBPQ13875 183 aa11.45□□□□□ -0.58
SMPD3-203ENST00000563226 RPL37AP61513 92 aaKnown RBP11.45□□□□□ -0.58
SMPD3-203ENST00000563226 HRCT1Q6UXD1 115 aa11.43□□□□□ -0.58
SMPD3-203ENST00000563226 LINC00472Q9H8W2 130 aa11.43□□□□□ -0.58
SMPD3-203ENST00000563226 PKHD1P08F94 4074 aa11.43□□□□□ -0.58
SMPD3-203ENST00000563226 OCR1Q9BZK8 76 aa11.42□□□□□ -0.58
SMPD3-203ENST00000563226 VPS13BQ7Z7G8 4022 aa11.37□□□□□ -0.59
SMPD3-203ENST00000563226 HCG22E2RYF7 251 aa11.37□□□□□ -0.59
SMPD3-203ENST00000563226 SNURFQ9Y675 71 aa11.37□□□□□ -0.59
SMPD3-203ENST00000563226 Q96NJ1 140 aa11.35□□□□□ -0.59
SMPD3-203ENST00000563226 DYNC1H1Q14204 4646 aaKnown RBP11.34□□□□□ -0.59
SMPD3-203ENST00000563226 LCE6AA0A183 80 aa11.34□□□□□ -0.59
SMPD3-203ENST00000563226 WFDC13Q8IUB5 93 aa11.33□□□□□ -0.6
SMPD3-203ENST00000563226 RYR2Q92736 4967 aa11.33□□□□□ -0.6
SMPD3-203ENST00000563226 A8MWP4 228 aa11.32□□□□□ -0.6
SMPD3-203ENST00000563226 KLKP1Q107X0 134 aa11.32□□□□□ -0.6
SMPD3-203ENST00000563226 PRR15Q8IV56 129 aa11.32□□□□□ -0.6
SMPD3-203ENST00000563226 TMEM258P61165 79 aa11.29□□□□□ -0.6
SMPD3-203ENST00000563226 TMEM254Q8TBM7 123 aa11.29□□□□□ -0.6
SMPD3-203ENST00000563226 H7BZZ5 65 aa11.28□□□□□ -0.6
SMPD3-203ENST00000563226 KRTAP29-1A8MX34 341 aaPredicted RBP11.27□□□□□ -0.61
SMPD3-203ENST00000563226 J3KT08 172 aa11.26□□□□□ -0.61
SMPD3-203ENST00000563226 A0A087X002 238 aa11.26□□□□□ -0.61
SMPD3-203ENST00000563226 KMT2CQ8NEZ4 4911 aaKnown RBP11.25□□□□□ -0.61
SMPD3-203ENST00000563226 A0A0U1RQV1 116 aa11.23□□□□□ -0.61
SMPD3-203ENST00000563226 CASC2Q6XLA1 102 aa11.23□□□□□ -0.61
SMPD3-203ENST00000563226 LINC00336Q6ZUF6 198 aa11.23□□□□□ -0.61
SMPD3-203ENST00000563226 KRTAP13-2Q52LG2 175 aa11.22□□□□□ -0.61
SMPD3-203ENST00000563226 MMP24-AS1A0A0U1RRL7 71 aa11.21□□□□□ -0.62
SMPD3-203ENST00000563226 APOBP04114 4563 aaKnown RBP11.2□□□□□ -0.62
SMPD3-203ENST00000563226 A0A1B0GVY2 172 aa11.2□□□□□ -0.62
SMPD3-203ENST00000563226 SSBP3-AS1Q7Z2R9 100 aa11.2□□□□□ -0.62
SMPD3-203ENST00000563226 NDUFB1O75438 58 aa11.19□□□□□ -0.62
SMPD3-203ENST00000563226 KRTAP1-4P0C5Y4 121 aa11.19□□□□□ -0.62
SMPD3-203ENST00000563226 CD164Q04900 197 aa11.15□□□□□ -0.62
SMPD3-203ENST00000563226 FAM236DA0A1B0GTK5 79 aa11.15□□□□□ -0.63
SMPD3-203ENST00000563226 FAM236CP0DP71 79 aa11.15□□□□□ -0.63
SMPD3-203ENST00000563226 NDUFC1O43677 76 aa11.14□□□□□ -0.63
SMPD3-203ENST00000563226 FAM229BQ4G0N7 80 aa11.14□□□□□ -0.63
SMPD3-203ENST00000563226 A0A1B0GVX0 72 aa11.13□□□□□ -0.63
SMPD3-203ENST00000563226 IGHV6-1A0A0B4J1U7 121 aa11.13□□□□□ -0.63
SMPD3-203ENST00000563226 SPINK6Q6UWN8 80 aa11.13□□□□□ -0.63
SMPD3-203ENST00000563226 FAT1Q14517 4588 aa11.13□□□□□ -0.63
SMPD3-203ENST00000563226 hDV103S1A0JD37 113 aa11.12□□□□□ -0.63
SMPD3-203ENST00000563226 C8orf17Q9NRJ1 99 aa11.12□□□□□ -0.63
SMPD3-203ENST00000563226 C5orf47Q569G3 176 aa11.11□□□□□ -0.63
SMPD3-203ENST00000563226 ZCCHC13Q8WW36 166 aaKnown RBP11.1□□□□□ -0.63
SMPD3-203ENST00000563226 CDK2AP2O75956 126 aa11.1□□□□□ -0.63
SMPD3-203ENST00000563226 SMR3BP02814 79 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms