RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 DHRS4-AS1Q9P1J3 65 aa5.92□□□□□ -1.46
LINC00838-201ENST00000562956 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.91□□□□□ -1.46
LINC00838-201ENST00000562956 Q6ZVQ6 151 aa5.91□□□□□ -1.46
LINC00838-201ENST00000562956 DEFB105AQ8NG35 78 aa5.91□□□□□ -1.46
LINC00838-201ENST00000562956 SMIM26A0A096LP01 95 aa5.9□□□□□ -1.46
LINC00838-201ENST00000562956 RTL8CO15255 209 aa5.9□□□□□ -1.46
LINC00838-201ENST00000562956 ERC2-IT1O76042 136 aa5.9□□□□□ -1.46
LINC00838-201ENST00000562956 FAM229BQ4G0N7 80 aa5.9□□□□□ -1.46
LINC00838-201ENST00000562956 Q8N9L7 120 aa5.9□□□□□ -1.46
LINC00838-201ENST00000562956 SPACA4Q8TDM5 124 aa5.9□□□□□ -1.47
LINC00838-201ENST00000562956 UBE2BP63146 152 aa5.89□□□□□ -1.47
LINC00838-201ENST00000562956 Q6ZQT0 140 aa5.89□□□□□ -1.47
LINC00838-201ENST00000562956 Q8N377 158 aa5.89□□□□□ -1.47
LINC00838-201ENST00000562956 ST20-AS1Q8NBB2 130 aa5.89□□□□□ -1.47
LINC00838-201ENST00000562956 LOC110117498A0A087WWA1 95 aa5.89□□□□□ -1.47
LINC00838-201ENST00000562956 PRLHP81277 87 aa5.88□□□□□ -1.47
LINC00838-201ENST00000562956 DNAH6Q9C0G6 4158 aa5.88□□□□□ -1.47
LINC00838-201ENST00000562956 C3orf84H3BNL1 204 aa5.88□□□□□ -1.47
LINC00838-201ENST00000562956 TNP2Q05952 138 aa5.88□□□□□ -1.47
LINC00838-201ENST00000562956 KLKP1Q107X0 134 aa5.88□□□□□ -1.47
LINC00838-201ENST00000562956 ALMS1Q8TCU4 4167 aa5.88□□□□□ -1.47
LINC00838-201ENST00000562956 EPM2AB3EWF7 344 aa5.87□□□□□ -1.47
LINC00838-201ENST00000562956 TRBV7-4A0A0J9YYF1 115 aa5.87□□□□□ -1.47
LINC00838-201ENST00000562956 IGLV5-52A0A0A0MRZ9 124 aa5.86□□□□□ -1.47
LINC00838-201ENST00000562956 C1orf195Q5TG92 126 aa5.86□□□□□ -1.47
LINC00838-201ENST00000562956 IGLV5-48A0A075B6I7 105 aa5.86□□□□□ -1.47
LINC00838-201ENST00000562956 DNAH17Q9UFH2 4485 aa5.86□□□□□ -1.47
LINC00838-201ENST00000562956 FRAS1Q86XX4 4008 aa5.85□□□□□ -1.47
LINC00838-201ENST00000562956 PDE6GP18545 87 aa5.85□□□□□ -1.47
LINC00838-201ENST00000562956 NREPQ16612 68 aa5.85□□□□□ -1.47
LINC00838-201ENST00000562956 HIGD2AQ9BW72 106 aa5.85□□□□□ -1.47
LINC00838-201ENST00000562956 HYDINQ4G0P3 5121 aa5.85□□□□□ -1.47
LINC00838-201ENST00000562956 SEC61GP60059 68 aa5.83□□□□□ -1.48
LINC00838-201ENST00000562956 TMEM254Q8TBM7 123 aa5.83□□□□□ -1.48
LINC00838-201ENST00000562956 V9GYY9 64 aa5.83□□□□□ -1.48
LINC00838-201ENST00000562956 BPY2O14599 106 aa5.82□□□□□ -1.48
LINC00838-201ENST00000562956 KRTAP10-2P60368 255 aa5.82□□□□□ -1.48
LINC00838-201ENST00000562956 H0Y9J4 135 aa5.82□□□□□ -1.48
LINC00838-201ENST00000562956 BCE1O60756 84 aa5.81□□□□□ -1.48
LINC00838-201ENST00000562956 UBE2AP49459 152 aa5.81□□□□□ -1.48
LINC00838-201ENST00000562956 SMIM29Q86T20 159 aa5.81□□□□□ -1.48
LINC00838-201ENST00000562956 PLAC8Q9NZF1 115 aa5.81□□□□□ -1.48
LINC00838-201ENST00000562956 SRRM2Q9UQ35 2752 aaKnown RBP5.8□□□□□ -1.48
LINC00838-201ENST00000562956 KRTAP13-1Q8IUC0 172 aa5.8□□□□□ -1.48
LINC00838-201ENST00000562956 DNAH11Q96DT5 4516 aa5.79□□□□□ -1.48
LINC00838-201ENST00000562956 FAT2Q9NYQ8 4349 aa5.79□□□□□ -1.48
LINC00838-201ENST00000562956 CXCL6P80162 114 aa5.78□□□□□ -1.48
LINC00838-201ENST00000562956 PRR4Q16378 134 aa5.78□□□□□ -1.48
LINC00838-201ENST00000562956 C1orf137Q5JT78 98 aa5.78□□□□□ -1.48
LINC00838-201ENST00000562956 FAM30AQ9NZY2 134 aa5.78□□□□□ -1.48
LINC00838-201ENST00000562956 PSORS1C2Q9UIG4 136 aa5.78□□□□□ -1.48
LINC00838-201ENST00000562956 NDUFC1O43677 76 aa5.77□□□□□ -1.49
LINC00838-201ENST00000562956 DNAH8Q96JB1 4490 aa5.77□□□□□ -1.49
LINC00838-201ENST00000562956 PKD1P98161 4303 aa5.77□□□□□ -1.49
LINC00838-201ENST00000562956 A0A1W2PNM2 257 aa5.77□□□□□ -1.49
LINC00838-201ENST00000562956 DNAH5Q8TE73 4624 aa5.77□□□□□ -1.49
LINC00838-201ENST00000562956 A0A0G2JQZ4 141 aa5.76□□□□□ -1.49
LINC00838-201ENST00000562956 PSPHP1O15172 72 aa5.76□□□□□ -1.49
LINC00838-201ENST00000562956 SPRR1BP22528 89 aa5.75□□□□□ -1.49
LINC00838-201ENST00000562956 KRTAP10-1P60331 282 aa5.75□□□□□ -1.49
LINC00838-201ENST00000562956 CIRBP-AS1Q8TBR5 109 aa5.74□□□□□ -1.49
LINC00838-201ENST00000562956 IGFL1Q6UW32 110 aa5.74□□□□□ -1.49
LINC00838-201ENST00000562956 Q8NBF4 154 aa5.74□□□□□ -1.49
LINC00838-201ENST00000562956 IGLV8-61A0A075B6I0 122 aa5.73□□□□□ -1.49
LINC00838-201ENST00000562956 IGKV4-1P06312 121 aa5.73□□□□□ -1.49
LINC00838-201ENST00000562956 ATP5EP56381 51 aaPredicted RBP5.73□□□□□ -1.49
LINC00838-201ENST00000562956 SACSQ9NZJ4 4579 aa5.73□□□□□ -1.49
LINC00838-201ENST00000562956 Q6ZSA8 131 aa5.72□□□□□ -1.49
LINC00838-201ENST00000562956 SPRR4Q96PI1 79 aa5.72□□□□□ -1.49
LINC00838-201ENST00000562956 LCE6AA0A183 80 aa5.71□□□□□ -1.49
LINC00838-201ENST00000562956 OCR1Q9BZK8 76 aa5.71□□□□□ -1.49
LINC00838-201ENST00000562956 ZNF861PO60384 105 aa5.71□□□□□ -1.5
LINC00838-201ENST00000562956 A0A1B0GW54 56 aa5.7□□□□□ -1.5
LINC00838-201ENST00000562956 A8MU10 97 aa5.7□□□□□ -1.5
LINC00838-201ENST00000562956 LINC00483Q53H64 154 aa5.69□□□□□ -1.5
LINC00838-201ENST00000562956 IGLV7-43P04211 117 aa5.68□□□□□ -1.5
LINC00838-201ENST00000562956 PMAIP1Q13794 54 aa5.68□□□□□ -1.5
LINC00838-201ENST00000562956 C1orf64Q8NEQ6 169 aa5.68□□□□□ -1.5
LINC00838-201ENST00000562956 ANAPC11Q9NYG5 84 aa5.68□□□□□ -1.5
LINC00838-201ENST00000562956 IGLV9-49A0A0B4J1Y8 123 aa5.67□□□□□ -1.5
LINC00838-201ENST00000562956 hDV103S1A0JD37 113 aa5.67□□□□□ -1.5
LINC00838-201ENST00000562956 ZNF706Q9Y5V0 76 aaPredicted RBP5.67□□□□□ -1.5
LINC00838-201ENST00000562956 PKHD1P08F94 4074 aa5.66□□□□□ -1.5
LINC00838-201ENST00000562956 A0A087WSZ3 146 aa5.66□□□□□ -1.5
LINC00838-201ENST00000562956 DEFB116Q30KQ4 102 aa5.65□□□□□ -1.5
LINC00838-201ENST00000562956 LRP1BQ9NZR2 4599 aa5.65□□□□□ -1.5
LINC00838-201ENST00000562956 A8MUN3 132 aa5.64□□□□□ -1.51
LINC00838-201ENST00000562956 TRAV22A0A0B4J277 110 aa5.64□□□□□ -1.51
LINC00838-201ENST00000562956 PRR15Q8IV56 129 aa5.63□□□□□ -1.51
LINC00838-201ENST00000562956 MOBPQ13875 183 aa5.62□□□□□ -1.51
LINC00838-201ENST00000562956 KMT2CQ8NEZ4 4911 aaKnown RBP5.62□□□□□ -1.51
LINC00838-201ENST00000562956 RYR2Q92736 4967 aa5.62□□□□□ -1.51
LINC00838-201ENST00000562956 A0A1B0GVY2 172 aa5.62□□□□□ -1.51
LINC00838-201ENST00000562956 DSCR10P59022 87 aa5.61□□□□□ -1.51
LINC00838-201ENST00000562956 K7EQZ3 153 aa5.61□□□□□ -1.51
LINC00838-201ENST00000562956 SPTSSBQ8NFR3 76 aa5.61□□□□□ -1.51
LINC00838-201ENST00000562956 VPS13BQ7Z7G8 4022 aa5.6□□□□□ -1.51
LINC00838-201ENST00000562956 RPL37AP61513 92 aaKnown RBP5.59□□□□□ -1.51
LINC00838-201ENST00000562956 Q1T7F1 81 aa5.59□□□□□ -1.51
LINC00838-201ENST00000562956 WFDC13Q8IUB5 93 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms