RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 FAUP35544 74 aaKnown RBP-1.23□□□□□ -2.61
USP8-218ENST00000561330 SMG1Q96Q15 3661 aaKnown RBP-1.23□□□□□ -2.61
USP8-218ENST00000561330 USP32Q8NFA0 1604 aa-1.23□□□□□ -2.61
USP8-218ENST00000561330 A0A1B0GUT8 65 aa-1.24□□□□□ -2.61
USP8-218ENST00000561330 C20orf202A1L168 122 aa-1.24□□□□□ -2.61
USP8-218ENST00000561330 EFCAB10A6NFE3 127 aa-1.24□□□□□ -2.61
USP8-218ENST00000561330 MT-ATP8P03928 68 aa-1.24□□□□□ -2.61
USP8-218ENST00000561330 FRYQ5TBA9 3013 aa-1.24□□□□□ -2.61
USP8-218ENST00000561330 SPENQ96T58 3664 aaKnown RBP-1.25□□□□□ -2.61
USP8-218ENST00000561330 SPTBN5Q9NRC6 3674 aaKnown RBP-1.25□□□□□ -2.61
USP8-218ENST00000561330 PLXNC1O60486 1568 aa-1.25□□□□□ -2.61
USP8-218ENST00000561330 TLN2Q9Y4G6 2542 aa-1.25□□□□□ -2.61
USP8-218ENST00000561330 COL6A5A8TX70 2615 aa-1.25□□□□□ -2.61
USP8-218ENST00000561330 MT1HL1P0DM35 61 aa-1.25□□□□□ -2.61
USP8-218ENST00000561330 WFDC9Q8NEX5 89 aa-1.25□□□□□ -2.61
USP8-218ENST00000561330 CHD7Q9P2D1 2997 aa-1.25□□□□□ -2.61
USP8-218ENST00000561330 DNAH17Q9UFH2 4485 aa-1.25□□□□□ -2.61
USP8-218ENST00000561330 NESP48681 1621 aa-1.26□□□□□ -2.61
USP8-218ENST00000561330 POLR1AO95602 1720 aaPredicted RBP-1.26□□□□□ -2.61
USP8-218ENST00000561330 C5orf42Q9H799 3197 aa-1.26□□□□□ -2.61
USP8-218ENST00000561330 CYB5AP00167 134 aa-1.26□□□□□ -2.61
USP8-218ENST00000561330 S100A10P60903 97 aa-1.26□□□□□ -2.61
USP8-218ENST00000561330 PLGLAQ15195 96 aa-1.26□□□□□ -2.61
USP8-218ENST00000561330 C2orf88Q9BSF0 95 aa-1.26□□□□□ -2.61
USP8-218ENST00000561330 DNAH10Q8IVF4 4471 aa-1.27□□□□□ -2.61
USP8-218ENST00000561330 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.27□□□□□ -2.61
USP8-218ENST00000561330 ANKRD36CQ5JPF3 1778 aa-1.28□□□□□ -2.61
USP8-218ENST00000561330 ZFYVE16Q7Z3T8 1539 aa-1.28□□□□□ -2.61
USP8-218ENST00000561330 SMR3BP02814 79 aaPredicted RBP-1.28□□□□□ -2.61
USP8-218ENST00000561330 DEFB106AQ8N104 65 aa-1.28□□□□□ -2.61
USP8-218ENST00000561330 DNAH5Q8TE73 4624 aa-1.28□□□□□ -2.62
USP8-218ENST00000561330 EYSQ5T1H1 3165 aa-1.29□□□□□ -2.62
USP8-218ENST00000561330 DOT1LQ8TEK3 1739 aa-1.29□□□□□ -2.62
USP8-218ENST00000561330 NWD1Q149M9 1564 aa-1.29□□□□□ -2.62
USP8-218ENST00000561330 FYCO1Q9BQS8 1478 aa-1.29□□□□□ -2.62
USP8-218ENST00000561330 BPTFQ12830 3046 aa-1.29□□□□□ -2.62
USP8-218ENST00000561330 TRAV21A0A0B4J279 112 aa-1.29□□□□□ -2.62
USP8-218ENST00000561330 LINC00587B1AMM8 73 aa-1.29□□□□□ -2.62
USP8-218ENST00000561330 MT1EP04732 61 aa-1.29□□□□□ -2.62
USP8-218ENST00000561330 LINC00032P0C843 101 aa-1.29□□□□□ -2.62
USP8-218ENST00000561330 SMIM11AP58511 58 aa-1.29□□□□□ -2.62
USP8-218ENST00000561330 ITPR1Q14643 2758 aa-1.3□□□□□ -2.62
USP8-218ENST00000561330 MAGI3Q5TCQ9 1506 aa-1.3□□□□□ -2.62
USP8-218ENST00000561330 IFI6P09912 130 aa-1.3□□□□□ -2.62
USP8-218ENST00000561330 SARNPP82979 210 aaKnown RBP-1.3□□□□□ -2.62
USP8-218ENST00000561330 DEPDC5O75140 1603 aa-1.3□□□□□ -2.62
USP8-218ENST00000561330 ATP7BP35670 1465 aa-1.31□□□□□ -2.62
USP8-218ENST00000561330 HMGN2P05204 90 aaKnown RBP-1.31□□□□□ -2.62
USP8-218ENST00000561330 MT1GP13640 62 aa-1.31□□□□□ -2.62
USP8-218ENST00000561330 PEA15Q15121 130 aa-1.31□□□□□ -2.62
USP8-218ENST00000561330 BAZ1AQ9NRL2 1556 aaPredicted RBP-1.31□□□□□ -2.62
USP8-218ENST00000561330 DDX60LQ5H9U9 1706 aaKnown RBP-1.32□□□□□ -2.62
USP8-218ENST00000561330 PLIN4Q96Q06 1357 aa-1.32□□□□□ -2.62
USP8-218ENST00000561330 WIZO95785 1651 aa-1.32□□□□□ -2.62
USP8-218ENST00000561330 ACYP1P07311 99 aa-1.32□□□□□ -2.62
USP8-218ENST00000561330 DEFB130BP0DP73 79 aa-1.32□□□□□ -2.62
USP8-218ENST00000561330 DEFB130AP0DP74 79 aa-1.32□□□□□ -2.62
USP8-218ENST00000561330 IAPPP10997 89 aa-1.32□□□□□ -2.62
USP8-218ENST00000561330 MT1LQ93083 61 aa-1.32□□□□□ -2.62
USP8-218ENST00000561330 DPY30Q9C005 99 aa-1.32□□□□□ -2.62
USP8-218ENST00000561330 EPRSP07814 1512 aaKnown RBP-1.32□□□□□ -2.62
USP8-218ENST00000561330 UBR1Q8IWV7 1749 aa-1.32□□□□□ -2.62
USP8-218ENST00000561330 TRRAPQ9Y4A5 3859 aa-1.33□□□□□ -2.62
USP8-218ENST00000561330 FANCAO15360 1455 aa-1.34□□□□□ -2.62
USP8-218ENST00000561330 ATP10BO94823 1461 aa-1.34□□□□□ -2.62
USP8-218ENST00000561330 MYO9AB2RTY4 2548 aa-1.35□□□□□ -2.63
USP8-218ENST00000561330 TEX14Q8IWB6 1497 aa-1.35□□□□□ -2.63
USP8-218ENST00000561330 MT1MQ8N339 61 aa-1.35□□□□□ -2.63
USP8-218ENST00000561330 SPTAN1Q13813 2472 aaKnown RBP-1.35□□□□□ -2.63
USP8-218ENST00000561330 LRBAP50851 2863 aa-1.36□□□□□ -2.63
USP8-218ENST00000561330 MYO3AQ8NEV4 1616 aa-1.36□□□□□ -2.63
USP8-218ENST00000561330 LYNX1G3V0Z9 82 aa-1.36□□□□□ -2.63
USP8-218ENST00000561330 MT2AP02795 61 aa-1.36□□□□□ -2.63
USP8-218ENST00000561330 NEXMIFQ5QGS0 1516 aa-1.36□□□□□ -2.63
USP8-218ENST00000561330 CEP295Q9C0D2 2601 aa-1.36□□□□□ -2.63
USP8-218ENST00000561330 NDUFB1O75438 58 aa-1.37□□□□□ -2.63
USP8-218ENST00000561330 MT1BP07438 61 aa-1.37□□□□□ -2.63
USP8-218ENST00000561330 KRTAP20-1Q3LI63 56 aa-1.37□□□□□ -2.63
USP8-218ENST00000561330 CLPSL2Q6UWE3 100 aa-1.37□□□□□ -2.63
USP8-218ENST00000561330 ARFGEF2Q9Y6D5 1785 aa-1.37□□□□□ -2.63
USP8-218ENST00000561330 MYMXA0A1B0GTQ4 84 aa-1.38□□□□□ -2.63
USP8-218ENST00000561330 KRTAP8-1Q8IUC2 63 aa-1.38□□□□□ -2.63
USP8-218ENST00000561330 CDC42BPAQ5VT25 1732 aa-1.38□□□□□ -2.63
USP8-218ENST00000561330 PARP4Q9UKK3 1724 aaKnown RBP-1.38□□□□□ -2.63
USP8-218ENST00000561330 CEP170BQ9Y4F5 1589 aaPredicted RBP-1.38□□□□□ -2.63
USP8-218ENST00000561330 CNTLNQ9NXG0 1405 aa-1.39□□□□□ -2.63
USP8-218ENST00000561330 LCE6AA0A183 80 aa-1.39□□□□□ -2.63
USP8-218ENST00000561330 S100PP25815 95 aa-1.39□□□□□ -2.63
USP8-218ENST00000561330 IFI27P40305 119 aaPredicted RBP-1.39□□□□□ -2.63
USP8-218ENST00000561330 C14orf144Q96I85 54 aa-1.39□□□□□ -2.63
USP8-218ENST00000561330 TCEAL7Q9BRU2 100 aa-1.39□□□□□ -2.63
USP8-218ENST00000561330 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.39□□□□□ -2.63
USP8-218ENST00000561330 ZNF831Q5JPB2 1677 aa-1.39□□□□□ -2.63
USP8-218ENST00000561330 ITSN1Q15811 1721 aa-1.4□□□□□ -2.63
USP8-218ENST00000561330 ATP6V1G2-DDX39BF2Z307 99 aa-1.4□□□□□ -2.63
USP8-218ENST00000561330 GYPAP02724 150 aa-1.4□□□□□ -2.63
USP8-218ENST00000561330 C20orf78Q9BR46 151 aa-1.4□□□□□ -2.63
USP8-218ENST00000561330 NCOA2Q15596 1464 aa-1.4□□□□□ -2.63
USP8-218ENST00000561330 PLCH1Q4KWH8 1693 aa-1.4□□□□□ -2.63
USP8-218ENST00000561330 TOGARAM1Q9Y4F4 1720 aa-1.4□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 304.3 ms