RNA–Protein interactions for RNA: ENST00000558583.2

SHISA9-203, Transcript of shisa family member 9, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SHISA9, Length 6,724 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-203ENST00000558583 Q5W150 140 aa9.61□□□□□ -0.87
SHISA9-203ENST00000558583 DMAC1Q96GE9 116 aa9.6□□□□□ -0.87
SHISA9-203ENST00000558583 A0A0A0MQY5 61 aa9.59□□□□□ -0.87
SHISA9-203ENST00000558583 PLAC8Q9NZF1 115 aa9.58□□□□□ -0.88
SHISA9-203ENST00000558583 EPG5Q9HCE0 2579 aa9.57□□□□□ -0.88
SHISA9-203ENST00000558583 SPATA8Q6RVD6 105 aa9.56□□□□□ -0.88
SHISA9-203ENST00000558583 OXTP01178 125 aa9.55□□□□□ -0.88
SHISA9-203ENST00000558583 M0QZ58 72 aa9.53□□□□□ -0.88
SHISA9-203ENST00000558583 PRRC2CQ9Y520 2896 aaKnown RBP9.52□□□□□ -0.88
SHISA9-203ENST00000558583 FLG2Q5D862 2391 aaPredicted RBP9.5□□□□□ -0.89
SHISA9-203ENST00000558583 CFAP54Q96N23 3096 aa9.49□□□□□ -0.89
SHISA9-203ENST00000558583 ATRQ13535 2644 aa9.49□□□□□ -0.89
SHISA9-203ENST00000558583 ROMO1P60602 79 aa9.47□□□□□ -0.89
SHISA9-203ENST00000558583 H1FX-AS1Q4G0G2 97 aa9.44□□□□□ -0.9
SHISA9-203ENST00000558583 ADM2Q7Z4H4 148 aa9.43□□□□□ -0.9
SHISA9-203ENST00000558583 KRTAP1-5Q9BYS1 174 aa9.43□□□□□ -0.9
SHISA9-203ENST00000558583 LINC00472Q9H8W2 130 aa9.41□□□□□ -0.9
SHISA9-203ENST00000558583 MAST4O15021 2626 aa9.4□□□□□ -0.91
SHISA9-203ENST00000558583 XIRP2A4UGR9 3374 aa9.4□□□□□ -0.91
SHISA9-203ENST00000558583 RPL37P61927 97 aaKnown RBP9.39□□□□□ -0.91
SHISA9-203ENST00000558583 MKI67P46013 3256 aaKnown RBP9.39□□□□□ -0.91
SHISA9-203ENST00000558583 KRTAP26-1Q6PEX3 210 aa9.38□□□□□ -0.91
SHISA9-203ENST00000558583 A0A0C4DFX4 3053 aa9.36□□□□□ -0.91
SHISA9-203ENST00000558583 FREM2Q5SZK8 3169 aa9.36□□□□□ -0.91
SHISA9-203ENST00000558583 SPRR1AP35321 89 aa9.31□□□□□ -0.92
SHISA9-203ENST00000558583 CELSR3Q9NYQ7 3312 aa9.28□□□□□ -0.92
SHISA9-203ENST00000558583 A8MU10 97 aa9.27□□□□□ -0.93
SHISA9-203ENST00000558583 LAMA2P24043 3122 aaKnown RBP9.27□□□□□ -0.93
SHISA9-203ENST00000558583 Q6ZR54 194 aa9.25□□□□□ -0.93
SHISA9-203ENST00000558583 PANO1I0J062 215 aa9.22□□□□□ -0.93
SHISA9-203ENST00000558583 A0A087X002 238 aa9.22□□□□□ -0.93
SHISA9-203ENST00000558583 NOTCH2NLQ7Z3S9 236 aa9.22□□□□□ -0.93
SHISA9-203ENST00000558583 C20orf166-AS1Q96NR2 134 aa9.2□□□□□ -0.94
SHISA9-203ENST00000558583 CFAP46Q8IYW2 2715 aa9.19□□□□□ -0.94
SHISA9-203ENST00000558583 KRTAP16-1A8MUX0 517 aa9.19□□□□□ -0.94
SHISA9-203ENST00000558583 TRIOO75962 3097 aa9.18□□□□□ -0.94
SHISA9-203ENST00000558583 ITPR3Q14573 2671 aa9.18□□□□□ -0.94
SHISA9-203ENST00000558583 FLNAP21333 2647 aaKnown RBP9.16□□□□□ -0.94
SHISA9-203ENST00000558583 HELZ2Q9BYK8 2649 aaKnown RBP9.14□□□□□ -0.95
SHISA9-203ENST00000558583 DNAH14Q0VDD8 3507 aa9.14□□□□□ -0.95
SHISA9-203ENST00000558583 SPRR1BP22528 89 aa9.13□□□□□ -0.95
SHISA9-203ENST00000558583 STAB1Q9NY15 2570 aa9.12□□□□□ -0.95
SHISA9-203ENST00000558583 BRCA2P51587 3418 aa9.12□□□□□ -0.95
SHISA9-203ENST00000558583 RANBP2P49792 3224 aaKnown RBP9.11□□□□□ -0.95
SHISA9-203ENST00000558583 NDUFAF8A1L188 74 aa9.1□□□□□ -0.95
SHISA9-203ENST00000558583 KRTAP25-1Q3LHN0 102 aa9.07□□□□□ -0.96
SHISA9-203ENST00000558583 SETXQ7Z333 2677 aaKnown RBP9.05□□□□□ -0.96
SHISA9-203ENST00000558583 REV3LO60673 3130 aa9.04□□□□□ -0.96
SHISA9-203ENST00000558583 A8MUU9 505 aa9.03□□□□□ -0.96
SHISA9-203ENST00000558583 A0A1B0GVY2 172 aa9.03□□□□□ -0.96
SHISA9-203ENST00000558583 CHD7Q9P2D1 2997 aa9.02□□□□□ -0.97
SHISA9-203ENST00000558583 KRTAP11-1Q8IUC1 163 aa9.02□□□□□ -0.97
SHISA9-203ENST00000558583 LAMA3Q16787 3333 aa9.01□□□□□ -0.97
SHISA9-203ENST00000558583 KRTAP29-1A8MX34 341 aaPredicted RBP9.01□□□□□ -0.97
SHISA9-203ENST00000558583 AKAP13Q12802 2813 aa9□□□□□ -0.97
SHISA9-203ENST00000558583 A6NN06 94 aa8.99□□□□□ -0.97
SHISA9-203ENST00000558583 VPS13AQ96RL7 3174 aa8.98□□□□□ -0.97
SHISA9-203ENST00000558583 TEX15Q9BXT5 2789 aa8.97□□□□□ -0.97
SHISA9-203ENST00000558583 TEP1Q99973 2627 aaKnown RBP8.96□□□□□ -0.98
SHISA9-203ENST00000558583 SZT2Q5T011 3432 aa8.95□□□□□ -0.98
SHISA9-203ENST00000558583 KRTAP4-16G5E9R7 235 aaPredicted RBP8.95□□□□□ -0.98
SHISA9-203ENST00000558583 C10orf95Q9H7T3 257 aa8.94□□□□□ -0.98
SHISA9-203ENST00000558583 UNC80Q8N2C7 3258 aa8.94□□□□□ -0.98
SHISA9-203ENST00000558583 CHD6Q8TD26 2715 aa8.93□□□□□ -0.98
SHISA9-203ENST00000558583 CDH23Q9H251 3354 aa8.92□□□□□ -0.98
SHISA9-203ENST00000558583 PRUNE2Q8WUY3 3088 aa8.91□□□□□ -0.98
SHISA9-203ENST00000558583 MGAQ8IWI9 3026 aa8.88□□□□□ -0.99
SHISA9-203ENST00000558583 NBEAL1Q6ZS30 2694 aa8.87□□□□□ -0.99
SHISA9-203ENST00000558583 DMBT1Q9UGM3 2413 aaPredicted RBP8.87□□□□□ -0.99
SHISA9-203ENST00000558583 WDFY4Q6ZS81 3184 aa8.85□□□□□ -0.99
SHISA9-203ENST00000558583 ASB16-AS1Q495Z4 193 aa8.81□□□□□ -1
SHISA9-203ENST00000558583 COL6A3P12111 3177 aa8.81□□□□□ -1
SHISA9-203ENST00000558583 CENPEQ02224 2701 aa8.8□□□□□ -1
SHISA9-203ENST00000558583 KRTAP10-8P60410 259 aa8.79□□□□□ -1
SHISA9-203ENST00000558583 STAB2Q8WWQ8 2551 aa8.78□□□□□ -1
SHISA9-203ENST00000558583 KRTAP7-1Q8IUC3 87 aa8.76□□□□□ -1.01
SHISA9-203ENST00000558583 FRYQ5TBA9 3013 aa8.75□□□□□ -1.01
SHISA9-203ENST00000558583 BAHCC1Q9P281 2608 aa8.75□□□□□ -1.01
SHISA9-203ENST00000558583 CFAP47Q6ZTR5 3102 aa8.73□□□□□ -1.01
SHISA9-203ENST00000558583 KRTAP13-2Q52LG2 175 aa8.72□□□□□ -1.01
SHISA9-203ENST00000558583 UNC79Q9P2D8 2635 aa8.71□□□□□ -1.02
SHISA9-203ENST00000558583 VCANP13611 3396 aa8.7□□□□□ -1.02
SHISA9-203ENST00000558583 Q6ZRN7 208 aaPredicted RBP8.7□□□□□ -1.02
SHISA9-203ENST00000558583 HTTP42858 3142 aa8.69□□□□□ -1.02
SHISA9-203ENST00000558583 TNP1P09430 55 aa8.69□□□□□ -1.02
SHISA9-203ENST00000558583 NBEAL2Q6ZNJ1 2754 aa8.69□□□□□ -1.02
SHISA9-203ENST00000558583 KALRNO60229 2985 aa8.67□□□□□ -1.02
SHISA9-203ENST00000558583 GCN1Q92616 2671 aaKnown RBP8.67□□□□□ -1.02
SHISA9-203ENST00000558583 COL6A5A8TX70 2615 aa8.66□□□□□ -1.02
SHISA9-203ENST00000558583 CRYBG3Q68DQ2 2970 aa8.66□□□□□ -1.02
SHISA9-203ENST00000558583 KRTAP10-10P60014 251 aa8.65□□□□□ -1.03
SHISA9-203ENST00000558583 RPS29P62273 56 aaKnown RBP8.61□□□□□ -1.03
SHISA9-203ENST00000558583 SPEGQ15772 3267 aa8.59□□□□□ -1.03
SHISA9-203ENST00000558583 KRTAP21-3Q3LHN1 58 aa8.54□□□□□ -1.04
SHISA9-203ENST00000558583 NOTCH1P46531 2555 aa8.52□□□□□ -1.05
SHISA9-203ENST00000558583 LAMA1P25391 3075 aa8.52□□□□□ -1.05
SHISA9-203ENST00000558583 CHD9Q3L8U1 2897 aa8.52□□□□□ -1.05
SHISA9-203ENST00000558583 TRANK1O15050 2925 aa8.51□□□□□ -1.05
SHISA9-203ENST00000558583 DMXL2Q8TDJ6 3036 aa8.48□□□□□ -1.05
SHISA9-203ENST00000558583 MAP1AP78559 2803 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms