RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 LINC00643Q86TS7 51 aa7.62□□□□□ -1.19
SHMT2-233ENST00000557529 IGLV8-61A0A075B6I0 122 aa7.61□□□□□ -1.19
SHMT2-233ENST00000557529 DNAH5Q8TE73 4624 aa7.6□□□□□ -1.19
SHMT2-233ENST00000557529 MT-ATP8P03928 68 aa7.6□□□□□ -1.19
SHMT2-233ENST00000557529 SPRR4Q96PI1 79 aa7.6□□□□□ -1.19
SHMT2-233ENST00000557529 UBL5Q9BZL1 73 aa7.6□□□□□ -1.19
SHMT2-233ENST00000557529 PKD1P98161 4303 aa7.6□□□□□ -1.19
SHMT2-233ENST00000557529 DNAH8Q96JB1 4490 aa7.6□□□□□ -1.19
SHMT2-233ENST00000557529 A0A1B0GW54 56 aa7.59□□□□□ -1.19
SHMT2-233ENST00000557529 RYR2Q92736 4967 aa7.59□□□□□ -1.19
SHMT2-233ENST00000557529 LINC00483Q53H64 154 aa7.59□□□□□ -1.2
SHMT2-233ENST00000557529 Q6JHZ5 121 aa7.59□□□□□ -1.2
SHMT2-233ENST00000557529 HAMPP81172 84 aa7.57□□□□□ -1.2
SHMT2-233ENST00000557529 Q8NBF4 154 aa7.57□□□□□ -1.2
SHMT2-233ENST00000557529 A0A1W2PNM2 257 aa7.55□□□□□ -1.2
SHMT2-233ENST00000557529 ATP5EP2Q5VTU8 51 aa7.55□□□□□ -1.2
SHMT2-233ENST00000557529 IGFL1Q6UW32 110 aa7.55□□□□□ -1.2
SHMT2-233ENST00000557529 TRBV7-7A0A0K0K1E9 115 aa7.54□□□□□ -1.2
SHMT2-233ENST00000557529 SCGB1A1P11684 91 aa7.54□□□□□ -1.2
SHMT2-233ENST00000557529 Q6Q795 121 aa7.54□□□□□ -1.2
SHMT2-233ENST00000557529 RPL37AP61513 92 aaKnown RBP7.53□□□□□ -1.2
SHMT2-233ENST00000557529 Q6ZVQ6 151 aa7.53□□□□□ -1.2
SHMT2-233ENST00000557529 IMUPQ9GZP8 106 aa7.53□□□□□ -1.2
SHMT2-233ENST00000557529 CRYGAP11844 174 aa7.52□□□□□ -1.21
SHMT2-233ENST00000557529 IGLV9-49A0A0B4J1Y8 123 aa7.5□□□□□ -1.21
SHMT2-233ENST00000557529 NREPQ16612 68 aa7.5□□□□□ -1.21
SHMT2-233ENST00000557529 C9orf153Q5TBE3 101 aa7.5□□□□□ -1.21
SHMT2-233ENST00000557529 IGKV3D-7A0A0C4DH55 119 aa7.49□□□□□ -1.21
SHMT2-233ENST00000557529 SRRM2Q9UQ35 2752 aaKnown RBP7.49□□□□□ -1.21
SHMT2-233ENST00000557529 KMT2CQ8NEZ4 4911 aaKnown RBP7.48□□□□□ -1.21
SHMT2-233ENST00000557529 A0A0G2JQZ4 141 aa7.47□□□□□ -1.21
SHMT2-233ENST00000557529 CXCL6P80162 114 aa7.47□□□□□ -1.21
SHMT2-233ENST00000557529 DYNC1H1Q14204 4646 aaKnown RBP7.46□□□□□ -1.22
SHMT2-233ENST00000557529 MOBPQ13875 183 aa7.46□□□□□ -1.22
SHMT2-233ENST00000557529 FAM229BQ4G0N7 80 aa7.46□□□□□ -1.22
SHMT2-233ENST00000557529 ANAPC11Q9NYG5 84 aa7.46□□□□□ -1.22
SHMT2-233ENST00000557529 LRP1BQ9NZR2 4599 aa7.44□□□□□ -1.22
SHMT2-233ENST00000557529 A0A087WSZ3 146 aa7.44□□□□□ -1.22
SHMT2-233ENST00000557529 SPINK6Q6UWN8 80 aa7.44□□□□□ -1.22
SHMT2-233ENST00000557529 BPY2O14599 106 aa7.43□□□□□ -1.22
SHMT2-233ENST00000557529 SSBP3-AS1Q7Z2R9 100 aa7.43□□□□□ -1.22
SHMT2-233ENST00000557529 HIST1H4AP62805 103 aaKnown RBP7.42□□□□□ -1.22
SHMT2-233ENST00000557529 PKHD1P08F94 4074 aa7.42□□□□□ -1.22
SHMT2-233ENST00000557529 SMR3BP02814 79 aaPredicted RBP7.41□□□□□ -1.22
SHMT2-233ENST00000557529 PCP4P48539 62 aa7.39□□□□□ -1.23
SHMT2-233ENST00000557529 FAM236AA0A1B0GUQ0 79 aa7.38□□□□□ -1.23
SHMT2-233ENST00000557529 FAM236BA0A1B0GV22 79 aa7.38□□□□□ -1.23
SHMT2-233ENST00000557529 KRTAP1-4P0C5Y4 121 aa7.38□□□□□ -1.23
SHMT2-233ENST00000557529 CD164Q04900 197 aa7.38□□□□□ -1.23
SHMT2-233ENST00000557529 SS18L2Q9UHA2 77 aa7.38□□□□□ -1.23
SHMT2-233ENST00000557529 A0A087WVE0 104 aa7.36□□□□□ -1.23
SHMT2-233ENST00000557529 A0A087X002 238 aa7.36□□□□□ -1.23
SHMT2-233ENST00000557529 CDK2AP2O75956 126 aa7.36□□□□□ -1.23
SHMT2-233ENST00000557529 PLA2G1BP04054 148 aaKnown RBP7.35□□□□□ -1.23
SHMT2-233ENST00000557529 HRCT1Q6UXD1 115 aa7.35□□□□□ -1.23
SHMT2-233ENST00000557529 KRTAP10-4P60372 401 aaPredicted RBP7.34□□□□□ -1.23
SHMT2-233ENST00000557529 KRTAP13-2Q52LG2 175 aa7.34□□□□□ -1.23
SHMT2-233ENST00000557529 APOBP04114 4563 aaKnown RBP7.34□□□□□ -1.23
SHMT2-233ENST00000557529 FAM229AH3BQW9 127 aa7.33□□□□□ -1.24
SHMT2-233ENST00000557529 IGKV4-1P06312 121 aa7.33□□□□□ -1.24
SHMT2-233ENST00000557529 LINC00472Q9H8W2 130 aa7.33□□□□□ -1.24
SHMT2-233ENST00000557529 J3KT08 172 aa7.33□□□□□ -1.24
SHMT2-233ENST00000557529 DSCR10P59022 87 aa7.33□□□□□ -1.24
SHMT2-233ENST00000557529 ANAPC13Q9BS18 74 aa7.33□□□□□ -1.24
SHMT2-233ENST00000557529 RYR3Q15413 4870 aa7.32□□□□□ -1.24
SHMT2-233ENST00000557529 ATOX1O00244 68 aa7.32□□□□□ -1.24
SHMT2-233ENST00000557529 VPS13BQ7Z7G8 4022 aa7.31□□□□□ -1.24
SHMT2-233ENST00000557529 Q8N9L7 120 aa7.31□□□□□ -1.24
SHMT2-233ENST00000557529 DEFB116Q30KQ4 102 aa7.3□□□□□ -1.24
SHMT2-233ENST00000557529 TYMSOSQ8TAI1 123 aa7.3□□□□□ -1.24
SHMT2-233ENST00000557529 A8MWP4 228 aa7.28□□□□□ -1.24
SHMT2-233ENST00000557529 K7EQZ3 153 aa7.28□□□□□ -1.24
SHMT2-233ENST00000557529 ASB16-AS1Q495Z4 193 aa7.27□□□□□ -1.25
SHMT2-233ENST00000557529 C4orf48Q5BLP8 95 aa7.27□□□□□ -1.25
SHMT2-233ENST00000557529 Q96NJ1 140 aa7.27□□□□□ -1.25
SHMT2-233ENST00000557529 Q5XG85 94 aa7.26□□□□□ -1.25
SHMT2-233ENST00000557529 NDUFB1O75438 58 aa7.25□□□□□ -1.25
SHMT2-233ENST00000557529 Q5VSD8 79 aa7.25□□□□□ -1.25
SHMT2-233ENST00000557529 PRR15Q8IV56 129 aa7.25□□□□□ -1.25
SHMT2-233ENST00000557529 PRR26Q8N8Z3 221 aa7.25□□□□□ -1.25
SHMT2-233ENST00000557529 LIMD2Q9BT23 127 aa7.25□□□□□ -1.25
SHMT2-233ENST00000557529 SMIM20Q8N5G0 67 aa7.24□□□□□ -1.25
SHMT2-233ENST00000557529 SPINK1P00995 79 aa7.23□□□□□ -1.25
SHMT2-233ENST00000557529 HCG22E2RYF7 251 aa7.22□□□□□ -1.25
SHMT2-233ENST00000557529 SPAG11AQ6PDA7 123 aa7.22□□□□□ -1.25
SHMT2-233ENST00000557529 SERP2Q8N6R1 65 aa7.21□□□□□ -1.25
SHMT2-233ENST00000557529 LINC00304Q8N9R0 145 aa7.21□□□□□ -1.25
SHMT2-233ENST00000557529 RPS29P62273 56 aaKnown RBP7.2□□□□□ -1.26
SHMT2-233ENST00000557529 FAT1Q14517 4588 aa7.2□□□□□ -1.26
SHMT2-233ENST00000557529 TRAV7A0A075B6U4 112 aa7.19□□□□□ -1.26
SHMT2-233ENST00000557529 A0A1B0GVX0 72 aa7.19□□□□□ -1.26
SHMT2-233ENST00000557529 COX7CP15954 63 aa7.19□□□□□ -1.26
SHMT2-233ENST00000557529 RYR1P21817 5038 aa7.18□□□□□ -1.26
SHMT2-233ENST00000557529 UQCRQO14949 82 aa7.17□□□□□ -1.26
SHMT2-233ENST00000557529 Q8N1X5 172 aa7.17□□□□□ -1.26
SHMT2-233ENST00000557529 C1orf195Q5TG92 126 aa7.16□□□□□ -1.26
SHMT2-233ENST00000557529 CASC2Q6XLA1 102 aa7.16□□□□□ -1.26
SHMT2-233ENST00000557529 WFDC13Q8IUB5 93 aa7.16□□□□□ -1.26
SHMT2-233ENST00000557529 IGHV6-1A0A0B4J1U7 121 aa7.15□□□□□ -1.26
SHMT2-233ENST00000557529 MMP24-AS1A0A0U1RRL7 71 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms