RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 A0A0G2JQZ4 141 aa11.98□□□□□ -0.49
SEC23A-213ENST00000557280 BATFQ16520 125 aa11.98□□□□□ -0.49
SEC23A-213ENST00000557280 NAA38Q9BRA0 125 aaKnown RBP11.97□□□□□ -0.49
SEC23A-213ENST00000557280 A0A1B0GX51 115 aa11.95□□□□□ -0.5
SEC23A-213ENST00000557280 SPINK1P00995 79 aa11.95□□□□□ -0.5
SEC23A-213ENST00000557280 COX6CP09669 75 aa11.94□□□□□ -0.5
SEC23A-213ENST00000557280 PRR4Q16378 134 aa11.94□□□□□ -0.5
SEC23A-213ENST00000557280 HRCT1Q6UXD1 115 aa11.94□□□□□ -0.5
SEC23A-213ENST00000557280 SNCGO76070 127 aa11.92□□□□□ -0.5
SEC23A-213ENST00000557280 PPDPFLQ8WWR9 84 aa11.92□□□□□ -0.5
SEC23A-213ENST00000557280 F8WEM9 126 aa11.91□□□□□ -0.5
SEC23A-213ENST00000557280 SCGB1C2P0DMR2 95 aa11.9□□□□□ -0.5
SEC23A-213ENST00000557280 OCIAD2Q56VL3 154 aa11.9□□□□□ -0.5
SEC23A-213ENST00000557280 LPAP08519 4548 aa11.89□□□□□ -0.51
SEC23A-213ENST00000557280 SNHG12Q9BXW3 62 aa11.89□□□□□ -0.51
SEC23A-213ENST00000557280 LRP2P98164 4655 aa11.89□□□□□ -0.51
SEC23A-213ENST00000557280 IGLV8-61A0A075B6I0 122 aa11.88□□□□□ -0.51
SEC23A-213ENST00000557280 RPS29P62273 56 aaKnown RBP11.88□□□□□ -0.51
SEC23A-213ENST00000557280 H3BUT2 72 aa11.87□□□□□ -0.51
SEC23A-213ENST00000557280 LST1O00453 97 aa11.87□□□□□ -0.51
SEC23A-213ENST00000557280 DNAL4O96015 105 aa11.86□□□□□ -0.51
SEC23A-213ENST00000557280 FABP2P12104 132 aa11.85□□□□□ -0.51
SEC23A-213ENST00000557280 IGFL1Q6UW32 110 aa11.85□□□□□ -0.51
SEC23A-213ENST00000557280 TRACP01848 142 aa11.84□□□□□ -0.51
SEC23A-213ENST00000557280 NDUFV3P56181 108 aaKnown RBP11.84□□□□□ -0.51
SEC23A-213ENST00000557280 ORMDL1Q9P0S3 153 aa11.84□□□□□ -0.51
SEC23A-213ENST00000557280 CD164Q04900 197 aa11.83□□□□□ -0.52
SEC23A-213ENST00000557280 TCL1BO95988 128 aa11.82□□□□□ -0.52
SEC23A-213ENST00000557280 TAX1BP3O14907 124 aa11.81□□□□□ -0.52
SEC23A-213ENST00000557280 Q6JHZ5 121 aa11.81□□□□□ -0.52
SEC23A-213ENST00000557280 UBR4Q5T4S7 5183 aa11.8□□□□□ -0.52
SEC23A-213ENST00000557280 IGLV7-46A0A075B6I9 117 aa11.78□□□□□ -0.52
SEC23A-213ENST00000557280 A0A1B0GV72 72 aa11.77□□□□□ -0.53
SEC23A-213ENST00000557280 GHRHP01286 108 aa11.77□□□□□ -0.53
SEC23A-213ENST00000557280 LIMD2Q9BT23 127 aa11.77□□□□□ -0.53
SEC23A-213ENST00000557280 C9orf118A6NHY6 69 aa11.76□□□□□ -0.53
SEC23A-213ENST00000557280 H3BMG7 143 aa11.76□□□□□ -0.53
SEC23A-213ENST00000557280 ATXN8Q156A1 80 aa11.75□□□□□ -0.53
SEC23A-213ENST00000557280 FP248Q71RG6 208 aaPredicted RBP11.75□□□□□ -0.53
SEC23A-213ENST00000557280 PCP4L1A6NKN8 68 aa11.74□□□□□ -0.53
SEC23A-213ENST00000557280 TMEM256-PLSCR3K7ERE1 68 aa11.74□□□□□ -0.53
SEC23A-213ENST00000557280 TRBV7-7A0A0K0K1E9 115 aa11.72□□□□□ -0.53
SEC23A-213ENST00000557280 H3BQ85 93 aa11.72□□□□□ -0.53
SEC23A-213ENST00000557280 Q5XG85 94 aa11.72□□□□□ -0.53
SEC23A-213ENST00000557280 A0A1W2PPM0 123 aa11.7□□□□□ -0.54
SEC23A-213ENST00000557280 LYRM7Q5U5X0 104 aa11.7□□□□□ -0.54
SEC23A-213ENST00000557280 BAALC-AS2P0C853 105 aa11.69□□□□□ -0.54
SEC23A-213ENST00000557280 UBE2V1Q13404 147 aa11.69□□□□□ -0.54
SEC23A-213ENST00000557280 TPRXLQ17RH7 258 aa11.69□□□□□ -0.54
SEC23A-213ENST00000557280 TRBV20-1A0A075B6N2 111 aa11.66□□□□□ -0.54
SEC23A-213ENST00000557280 C1orf195Q5TG92 126 aa11.66□□□□□ -0.54
SEC23A-213ENST00000557280 Q6Q795 121 aa11.66□□□□□ -0.54
SEC23A-213ENST00000557280 ANKRD29Q8N6D5 301 aa11.66□□□□□ -0.54
SEC23A-213ENST00000557280 A0A1W2PNM2 257 aa11.65□□□□□ -0.54
SEC23A-213ENST00000557280 KRTAP13-3Q3SY46 172 aa11.65□□□□□ -0.54
SEC23A-213ENST00000557280 COL5A1-AS1Q5SY13 56 aa11.65□□□□□ -0.54
SEC23A-213ENST00000557280 TEN1Q86WV5 123 aa11.63□□□□□ -0.55
SEC23A-213ENST00000557280 C9JAW5 83 aa11.62□□□□□ -0.55
SEC23A-213ENST00000557280 MTURNQ8N3F0 131 aa11.6□□□□□ -0.55
SEC23A-213ENST00000557280 A0A087WSZ3 146 aa11.59□□□□□ -0.55
SEC23A-213ENST00000557280 CDIP1Q9H305 208 aa11.59□□□□□ -0.55
SEC23A-213ENST00000557280 TRBV7-4A0A0J9YYF1 115 aa11.58□□□□□ -0.56
SEC23A-213ENST00000557280 ASB16-AS1Q495Z4 193 aa11.58□□□□□ -0.56
SEC23A-213ENST00000557280 RBM3P98179 157 aaKnown RBP11.57□□□□□ -0.56
SEC23A-213ENST00000557280 SPCS1Q9Y6A9 102 aa11.57□□□□□ -0.56
SEC23A-213ENST00000557280 CCKP06307 115 aa11.55□□□□□ -0.56
SEC23A-213ENST00000557280 RNF213Q63HN8 5207 aa11.53□□□□□ -0.56
SEC23A-213ENST00000557280 DSCR8Q96T75 97 aa11.52□□□□□ -0.57
SEC23A-213ENST00000557280 SS18L2Q9UHA2 77 aa11.52□□□□□ -0.57
SEC23A-213ENST00000557280 C9orf92A6NGG3 77 aa11.51□□□□□ -0.57
SEC23A-213ENST00000557280 VPS25Q9BRG1 176 aa11.51□□□□□ -0.57
SEC23A-213ENST00000557280 H3BT86 120 aa11.5□□□□□ -0.57
SEC23A-213ENST00000557280 OBSCN-AS1Q96MR7 158 aa11.49□□□□□ -0.57
SEC23A-213ENST00000557280 Q96NJ1 140 aa11.49□□□□□ -0.57
SEC23A-213ENST00000557280 JMJD7-PLA2G4BH0Y9G9 81 aa11.48□□□□□ -0.57
SEC23A-213ENST00000557280 C14orf132Q9NPU4 83 aa11.48□□□□□ -0.57
SEC23A-213ENST00000557280 MUC17Q685J3 4493 aa11.48□□□□□ -0.57
SEC23A-213ENST00000557280 K7EP34 96 aa11.47□□□□□ -0.57
SEC23A-213ENST00000557280 XP32Q5T750 250 aa11.47□□□□□ -0.57
SEC23A-213ENST00000557280 Q6ZQT0 140 aa11.46□□□□□ -0.57
SEC23A-213ENST00000557280 SMCPP49901 116 aaPredicted RBP11.45□□□□□ -0.58
SEC23A-213ENST00000557280 LOC110117498A0A087WWA1 95 aa11.44□□□□□ -0.58
SEC23A-213ENST00000557280 PRO0461Q9UI25 63 aa11.42□□□□□ -0.58
SEC23A-213ENST00000557280 DEFB116Q30KQ4 102 aa11.37□□□□□ -0.59
SEC23A-213ENST00000557280 LINC00472Q9H8W2 130 aa11.37□□□□□ -0.59
SEC23A-213ENST00000557280 PDE6GP18545 87 aa11.35□□□□□ -0.59
SEC23A-213ENST00000557280 SIGMAR1Q99720 223 aa11.35□□□□□ -0.59
SEC23A-213ENST00000557280 IGKV4-1P06312 121 aa11.33□□□□□ -0.6
SEC23A-213ENST00000557280 GTF2H5Q6ZYL4 71 aa11.32□□□□□ -0.6
SEC23A-213ENST00000557280 MUC2Q02817 5179 aa11.32□□□□□ -0.6
SEC23A-213ENST00000557280 SEC61BP60468 96 aaKnown RBP11.27□□□□□ -0.61
SEC23A-213ENST00000557280 A0A1B0GW54 56 aa11.26□□□□□ -0.61
SEC23A-213ENST00000557280 DSCR10P59022 87 aa11.26□□□□□ -0.61
SEC23A-213ENST00000557280 C21orf62-AS1Q17RA5 79 aa11.26□□□□□ -0.61
SEC23A-213ENST00000557280 KRTAP4-1Q9BYQ7 146 aa11.26□□□□□ -0.61
SEC23A-213ENST00000557280 RPL37P61927 97 aaKnown RBP11.24□□□□□ -0.61
SEC23A-213ENST00000557280 PCOTHQ58A44 107 aa11.23□□□□□ -0.61
SEC23A-213ENST00000557280 NOTCH2NLQ7Z3S9 236 aa11.22□□□□□ -0.61
SEC23A-213ENST00000557280 F8W1H4 67 aa11.21□□□□□ -0.61
SEC23A-213ENST00000557280 IGHV6-1A0A0B4J1U7 121 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms