RNA–Protein interactions for RNA: ENST00000557206.1

HIF1A-210, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 3

Gene HIF1A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-210ENST00000557206 IGIPA6NJ69 53 aa1.23□□□□□ -2.21
HIF1A-210ENST00000557206 H0YGX0 51 aa1.23□□□□□ -2.21
HIF1A-210ENST00000557206 STATHP02808 62 aa1.23□□□□□ -2.21
HIF1A-210ENST00000557206 SPTBN5Q9NRC6 3674 aaKnown RBP1.23□□□□□ -2.21
HIF1A-210ENST00000557206 EPG5Q9HCE0 2579 aa1.23□□□□□ -2.21
HIF1A-210ENST00000557206 SPTBP11277 2137 aa1.22□□□□□ -2.21
HIF1A-210ENST00000557206 CFAP54Q96N23 3096 aa1.22□□□□□ -2.21
HIF1A-210ENST00000557206 DMXL1Q9Y485 3027 aa1.22□□□□□ -2.21
HIF1A-210ENST00000557206 PKD1L2Q7Z442 2459 aa1.22□□□□□ -2.21
HIF1A-210ENST00000557206 RPS27LQ71UM5 84 aaKnown RBP1.22□□□□□ -2.21
HIF1A-210ENST00000557206 TP53AIP1Q9HCN2 124 aa1.22□□□□□ -2.21
HIF1A-210ENST00000557206 MYO15AQ9UKN7 3530 aa1.22□□□□□ -2.21
HIF1A-210ENST00000557206 SPTBN1Q01082 2364 aaKnown RBP1.22□□□□□ -2.21
HIF1A-210ENST00000557206 CACNA1BQ00975 2339 aa1.22□□□□□ -2.21
HIF1A-210ENST00000557206 LRRK2Q5S007 2527 aa1.22□□□□□ -2.21
HIF1A-210ENST00000557206 ANKHD1Q8IWZ3 2542 aaKnown RBP1.22□□□□□ -2.21
HIF1A-210ENST00000557206 DOCK11Q5JSL3 2073 aa1.22□□□□□ -2.21
HIF1A-210ENST00000557206 PTPRQQ9UMZ3 2332 aa1.21□□□□□ -2.22
HIF1A-210ENST00000557206 DSPP15924 2871 aaKnown RBP1.21□□□□□ -2.22
HIF1A-210ENST00000557206 DEFB109BQ30KR1 87 aa1.21□□□□□ -2.22
HIF1A-210ENST00000557206 USP34Q70CQ2 3546 aa1.21□□□□□ -2.22
HIF1A-210ENST00000557206 ZFYVE26Q68DK2 2539 aa1.21□□□□□ -2.22
HIF1A-210ENST00000557206 ESPL1Q14674 2120 aa1.21□□□□□ -2.22
HIF1A-210ENST00000557206 SPTAN1Q13813 2472 aaKnown RBP1.21□□□□□ -2.22
HIF1A-210ENST00000557206 DNAJC13O75165 2243 aa1.2□□□□□ -2.22
HIF1A-210ENST00000557206 NBASA2RRP1 2371 aa1.2□□□□□ -2.22
HIF1A-210ENST00000557206 FREM2Q5SZK8 3169 aa1.2□□□□□ -2.22
HIF1A-210ENST00000557206 AKAP13Q12802 2813 aa1.2□□□□□ -2.22
HIF1A-210ENST00000557206 K7EIL1 84 aa1.2□□□□□ -2.22
HIF1A-210ENST00000557206 COX6B1P14854 86 aa1.2□□□□□ -2.22
HIF1A-210ENST00000557206 COX6B2Q6YFQ2 88 aa1.2□□□□□ -2.22
HIF1A-210ENST00000557206 U3KQA8 63 aa1.2□□□□□ -2.22
HIF1A-210ENST00000557206 USP24Q9UPU5 2620 aa1.2□□□□□ -2.22
HIF1A-210ENST00000557206 COL6A6A6NMZ7 2263 aa1.2□□□□□ -2.22
HIF1A-210ENST00000557206 ITPR1Q14643 2758 aa1.2□□□□□ -2.22
HIF1A-210ENST00000557206 ANKRD17O75179 2603 aaKnown RBP1.19□□□□□ -2.22
HIF1A-210ENST00000557206 IGSF10Q6WRI0 2623 aa1.19□□□□□ -2.22
HIF1A-210ENST00000557206 CREBBPQ92793 2442 aa1.19□□□□□ -2.22
HIF1A-210ENST00000557206 CENPEQ02224 2701 aa1.19□□□□□ -2.22
HIF1A-210ENST00000557206 LINC01546A6NGU7 62 aa1.19□□□□□ -2.22
HIF1A-210ENST00000557206 INTS1Q8N201 2190 aaKnown RBP1.19□□□□□ -2.22
HIF1A-210ENST00000557206 BOD1L1Q8NFC6 3051 aa1.19□□□□□ -2.22
HIF1A-210ENST00000557206 CNFNQ9BYD5 112 aa1.19□□□□□ -2.22
HIF1A-210ENST00000557206 TIMM8BQ9Y5J9 83 aaPredicted RBP1.19□□□□□ -2.22
HIF1A-210ENST00000557206 CHD6Q8TD26 2715 aa1.19□□□□□ -2.22
HIF1A-210ENST00000557206 KALRNO60229 2985 aa1.19□□□□□ -2.22
HIF1A-210ENST00000557206 ZNF462Q96JM2 2506 aa1.19□□□□□ -2.22
HIF1A-210ENST00000557206 DMDP11532 3685 aa1.18□□□□□ -2.22
HIF1A-210ENST00000557206 DNAH14Q0VDD8 3507 aa1.18□□□□□ -2.22
HIF1A-210ENST00000557206 CACNA1CQ13936 2221 aa1.18□□□□□ -2.22
HIF1A-210ENST00000557206 FRYQ5TBA9 3013 aa1.18□□□□□ -2.22
HIF1A-210ENST00000557206 MRPL34Q9BQ48 92 aaKnown RBP1.18□□□□□ -2.22
HIF1A-210ENST00000557206 PCNX1Q96RV3 2341 aa1.18□□□□□ -2.22
HIF1A-210ENST00000557206 FREM1Q5H8C1 2179 aa1.18□□□□□ -2.22
HIF1A-210ENST00000557206 PTPN13Q12923 2485 aa1.17□□□□□ -2.22
HIF1A-210ENST00000557206 DOPEY1Q5JWR5 2465 aa1.17□□□□□ -2.22
HIF1A-210ENST00000557206 FLNCQ14315 2725 aa1.17□□□□□ -2.22
HIF1A-210ENST00000557206 PLCE1Q9P212 2302 aa1.17□□□□□ -2.22
HIF1A-210ENST00000557206 GCN1Q92616 2671 aaKnown RBP1.17□□□□□ -2.22
HIF1A-210ENST00000557206 HIVEP3Q5T1R4 2406 aa1.17□□□□□ -2.22
HIF1A-210ENST00000557206 MGAQ8IWI9 3026 aa1.17□□□□□ -2.22
HIF1A-210ENST00000557206 DMXL2Q8TDJ6 3036 aa1.17□□□□□ -2.22
HIF1A-210ENST00000557206 I3L2K1 104 aa1.17□□□□□ -2.22
HIF1A-210ENST00000557206 K7EQZ3 153 aa1.17□□□□□ -2.22
HIF1A-210ENST00000557206 SPINK9Q5DT21 86 aa1.17□□□□□ -2.22
HIF1A-210ENST00000557206 TMEM167BQ9NRX6 74 aa1.17□□□□□ -2.22
HIF1A-210ENST00000557206 CFAP46Q8IYW2 2715 aa1.17□□□□□ -2.22
HIF1A-210ENST00000557206 NAV2Q8IVL1 2488 aa1.17□□□□□ -2.22
HIF1A-210ENST00000557206 ATMQ13315 3056 aa1.17□□□□□ -2.22
HIF1A-210ENST00000557206 NBEAQ8NFP9 2946 aa1.17□□□□□ -2.22
HIF1A-210ENST00000557206 SPEGQ15772 3267 aa1.17□□□□□ -2.22
HIF1A-210ENST00000557206 CFAP47Q6ZTR5 3102 aa1.17□□□□□ -2.22
HIF1A-210ENST00000557206 CELSR3Q9NYQ7 3312 aa1.17□□□□□ -2.22
HIF1A-210ENST00000557206 ABCA12Q86UK0 2595 aa1.16□□□□□ -2.22
HIF1A-210ENST00000557206 ASPMQ8IZT6 3477 aa1.16□□□□□ -2.22
HIF1A-210ENST00000557206 ZZEF1O43149 2961 aa1.16□□□□□ -2.22
HIF1A-210ENST00000557206 FASNP49327 2511 aaKnown RBP1.16□□□□□ -2.22
HIF1A-210ENST00000557206 SPINK4O60575 86 aa1.16□□□□□ -2.22
HIF1A-210ENST00000557206 NDUFA3O95167 84 aa1.16□□□□□ -2.22
HIF1A-210ENST00000557206 CRIP1P50238 77 aa1.16□□□□□ -2.22
HIF1A-210ENST00000557206 SNRPGP62308 76 aaKnown RBP1.16□□□□□ -2.22
HIF1A-210ENST00000557206 Q8IZM0 81 aa1.16□□□□□ -2.22
HIF1A-210ENST00000557206 CDKN2A-AS1Q9UH64 79 aa1.16□□□□□ -2.22
HIF1A-210ENST00000557206 PRO0255Q9UI72 69 aa1.16□□□□□ -2.22
HIF1A-210ENST00000557206 UBR5O95071 2799 aaPredicted RBP1.16□□□□□ -2.22
HIF1A-210ENST00000557206 WDFY3Q8IZQ1 3526 aa1.16□□□□□ -2.22
HIF1A-210ENST00000557206 SPG11Q96JI7 2443 aa1.16□□□□□ -2.22
HIF1A-210ENST00000557206 DCHS1Q96JQ0 3298 aa1.16□□□□□ -2.22
HIF1A-210ENST00000557206 PKDREJQ9NTG1 2253 aa1.15□□□□□ -2.22
HIF1A-210ENST00000557206 CCDC168Q8NDH2 2452 aa1.15□□□□□ -2.22
HIF1A-210ENST00000557206 USP9YO00507 2555 aaPredicted RBP1.15□□□□□ -2.22
HIF1A-210ENST00000557206 USP9XQ93008 2570 aaPredicted RBP1.15□□□□□ -2.22
HIF1A-210ENST00000557206 FLNBO75369 2602 aaKnown RBP1.15□□□□□ -2.23
HIF1A-210ENST00000557206 HECTD1Q9ULT8 2610 aa1.15□□□□□ -2.23
HIF1A-210ENST00000557206 LOC400499M0QZD8 3231 aa1.15□□□□□ -2.23
HIF1A-210ENST00000557206 LINC00158P58513 81 aa1.15□□□□□ -2.23
HIF1A-210ENST00000557206 COX6A2Q02221 97 aa1.15□□□□□ -2.23
HIF1A-210ENST00000557206 PRB3Q04118 309 aaPredicted RBP1.15□□□□□ -2.23
HIF1A-210ENST00000557206 TTTY10Q9BZA0 68 aa1.15□□□□□ -2.23
HIF1A-210ENST00000557206 DOPEY2Q9Y3R5 2298 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms