RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 LINC01547P58512 204 aaPredicted RBP9.86□□□□□ -0.83
PCNX4-213ENST00000556907 LRP1Q07954 4544 aaKnown RBP9.86□□□□□ -0.83
PCNX4-213ENST00000556907 F8W1H4 67 aa9.85□□□□□ -0.83
PCNX4-213ENST00000556907 SMCPP49901 116 aaPredicted RBP9.85□□□□□ -0.83
PCNX4-213ENST00000556907 BAALC-AS2P0C853 105 aa9.84□□□□□ -0.83
PCNX4-213ENST00000556907 ANKRD29Q8N6D5 301 aa9.84□□□□□ -0.83
PCNX4-213ENST00000556907 ST20-AS1Q8NBB2 130 aa9.84□□□□□ -0.83
PCNX4-213ENST00000556907 ZNF706Q9Y5V0 76 aaPredicted RBP9.84□□□□□ -0.83
PCNX4-213ENST00000556907 TMEM256-PLSCR3K7ERE1 68 aa9.83□□□□□ -0.84
PCNX4-213ENST00000556907 KRTAP1-4P0C5Y4 121 aa9.83□□□□□ -0.84
PCNX4-213ENST00000556907 SPRR1BP22528 89 aa9.82□□□□□ -0.84
PCNX4-213ENST00000556907 SPRR4Q96PI1 79 aa9.82□□□□□ -0.84
PCNX4-213ENST00000556907 Q8N377 158 aa9.81□□□□□ -0.84
PCNX4-213ENST00000556907 DMBT1Q9UGM3 2413 aaPredicted RBP9.8□□□□□ -0.84
PCNX4-213ENST00000556907 TEX49A0A1B0GTD5 131 aa9.8□□□□□ -0.84
PCNX4-213ENST00000556907 KRTAP10-8P60410 259 aa9.8□□□□□ -0.84
PCNX4-213ENST00000556907 FAM229BQ4G0N7 80 aa9.8□□□□□ -0.84
PCNX4-213ENST00000556907 MT1HL1P0DM35 61 aa9.79□□□□□ -0.84
PCNX4-213ENST00000556907 LINC00483Q53H64 154 aa9.79□□□□□ -0.84
PCNX4-213ENST00000556907 CRYGAP11844 174 aa9.78□□□□□ -0.84
PCNX4-213ENST00000556907 DEFB105AQ8NG35 78 aa9.78□□□□□ -0.84
PCNX4-213ENST00000556907 GAGE2AQ6NT46 116 aa9.76□□□□□ -0.85
PCNX4-213ENST00000556907 SMIM29Q86T20 159 aa9.75□□□□□ -0.85
PCNX4-213ENST00000556907 TEN1Q86WV5 123 aa9.75□□□□□ -0.85
PCNX4-213ENST00000556907 PRR26Q8N8Z3 221 aa9.75□□□□□ -0.85
PCNX4-213ENST00000556907 NDUFV3P56181 108 aaKnown RBP9.74□□□□□ -0.85
PCNX4-213ENST00000556907 OBSCN-AS1Q96MR7 158 aa9.73□□□□□ -0.85
PCNX4-213ENST00000556907 ETDBQ3ZM63 59 aa9.72□□□□□ -0.85
PCNX4-213ENST00000556907 C3orf22Q8N5N4 141 aa9.72□□□□□ -0.85
PCNX4-213ENST00000556907 LAMTOR3Q9UHA4 124 aa9.72□□□□□ -0.85
PCNX4-213ENST00000556907 JMJD7-PLA2G4BH0Y9G9 81 aa9.71□□□□□ -0.86
PCNX4-213ENST00000556907 A0A087X002 238 aa9.7□□□□□ -0.86
PCNX4-213ENST00000556907 F8WEM9 126 aa9.7□□□□□ -0.86
PCNX4-213ENST00000556907 TNXBP22105 4242 aa9.69□□□□□ -0.86
PCNX4-213ENST00000556907 IGLV8-61A0A075B6I0 122 aa9.69□□□□□ -0.86
PCNX4-213ENST00000556907 TYMSOSQ8TAI1 123 aa9.69□□□□□ -0.86
PCNX4-213ENST00000556907 ANAPC11Q9NYG5 84 aa9.69□□□□□ -0.86
PCNX4-213ENST00000556907 RBM3P98179 157 aaKnown RBP9.66□□□□□ -0.86
PCNX4-213ENST00000556907 TRBV7-4A0A0J9YYF1 115 aa9.65□□□□□ -0.86
PCNX4-213ENST00000556907 A0A1B0GV72 72 aa9.65□□□□□ -0.86
PCNX4-213ENST00000556907 KRTAP13-2Q52LG2 175 aa9.65□□□□□ -0.86
PCNX4-213ENST00000556907 Q8NBF4 154 aa9.64□□□□□ -0.87
PCNX4-213ENST00000556907 C14orf132Q9NPU4 83 aa9.64□□□□□ -0.87
PCNX4-213ENST00000556907 LOC110117498A0A087WWA1 95 aa9.63□□□□□ -0.87
PCNX4-213ENST00000556907 IGLV9-49A0A0B4J1Y8 123 aa9.62□□□□□ -0.87
PCNX4-213ENST00000556907 C21orf62-AS1Q17RA5 79 aa9.62□□□□□ -0.87
PCNX4-213ENST00000556907 C9orf153Q5TBE3 101 aa9.62□□□□□ -0.87
PCNX4-213ENST00000556907 Q6JHZ5 121 aa9.62□□□□□ -0.87
PCNX4-213ENST00000556907 DSCR8Q96T75 97 aa9.62□□□□□ -0.87
PCNX4-213ENST00000556907 SSBP3-AS1Q7Z2R9 100 aa9.61□□□□□ -0.87
PCNX4-213ENST00000556907 HERC1Q15751 4861 aa9.6□□□□□ -0.87
PCNX4-213ENST00000556907 PDE6GP18545 87 aa9.6□□□□□ -0.87
PCNX4-213ENST00000556907 MOBPQ13875 183 aa9.6□□□□□ -0.87
PCNX4-213ENST00000556907 Q6ZQT0 140 aa9.6□□□□□ -0.87
PCNX4-213ENST00000556907 SPAG11AQ6PDA7 123 aa9.59□□□□□ -0.87
PCNX4-213ENST00000556907 IGFL1Q6UW32 110 aa9.59□□□□□ -0.87
PCNX4-213ENST00000556907 LINC00304Q8N9R0 145 aa9.57□□□□□ -0.88
PCNX4-213ENST00000556907 CCKP06307 115 aa9.55□□□□□ -0.88
PCNX4-213ENST00000556907 C4orf48Q5BLP8 95 aa9.55□□□□□ -0.88
PCNX4-213ENST00000556907 A0A1W2PNM2 257 aa9.53□□□□□ -0.88
PCNX4-213ENST00000556907 Q6Q795 121 aa9.53□□□□□ -0.88
PCNX4-213ENST00000556907 J3QR89 54 aa9.52□□□□□ -0.89
PCNX4-213ENST00000556907 FAM240AA0A1B0GVK7 77 aa9.51□□□□□ -0.89
PCNX4-213ENST00000556907 A0A0G2JQZ4 141 aa9.5□□□□□ -0.89
PCNX4-213ENST00000556907 SPINK1P00995 79 aa9.5□□□□□ -0.89
PCNX4-213ENST00000556907 A0A1B0GW54 56 aa9.49□□□□□ -0.89
PCNX4-213ENST00000556907 CD164Q04900 197 aa9.49□□□□□ -0.89
PCNX4-213ENST00000556907 VPS25Q9BRG1 176 aa9.49□□□□□ -0.89
PCNX4-213ENST00000556907 K7ERU9 68 aa9.48□□□□□ -0.89
PCNX4-213ENST00000556907 RPS29P62273 56 aaKnown RBP9.48□□□□□ -0.89
PCNX4-213ENST00000556907 ACYP1P07311 99 aa9.46□□□□□ -0.9
PCNX4-213ENST00000556907 TRBV7-7A0A0K0K1E9 115 aa9.45□□□□□ -0.9
PCNX4-213ENST00000556907 A0A087WSZ3 146 aa9.4□□□□□ -0.9
PCNX4-213ENST00000556907 HRCT1Q6UXD1 115 aa9.4□□□□□ -0.9
PCNX4-213ENST00000556907 LINC00846Q9NV44 126 aa9.4□□□□□ -0.9
PCNX4-213ENST00000556907 SS18L2Q9UHA2 77 aa9.39□□□□□ -0.91
PCNX4-213ENST00000556907 LIMD2Q9BT23 127 aa9.38□□□□□ -0.91
PCNX4-213ENST00000556907 HMCN2Q8NDA2 5059 aa9.38□□□□□ -0.91
PCNX4-213ENST00000556907 Q5XG85 94 aa9.37□□□□□ -0.91
PCNX4-213ENST00000556907 PRR4Q16378 134 aa9.35□□□□□ -0.91
PCNX4-213ENST00000556907 UBL5Q9BZL1 73 aa9.35□□□□□ -0.91
PCNX4-213ENST00000556907 ASB16-AS1Q495Z4 193 aa9.34□□□□□ -0.91
PCNX4-213ENST00000556907 Q6ZVQ6 151 aa9.34□□□□□ -0.91
PCNX4-213ENST00000556907 FP248Q71RG6 208 aaPredicted RBP9.34□□□□□ -0.91
PCNX4-213ENST00000556907 CDIP1Q9H305 208 aa9.33□□□□□ -0.92
PCNX4-213ENST00000556907 NREPQ16612 68 aa9.31□□□□□ -0.92
PCNX4-213ENST00000556907 RETNLBQ9BQ08 111 aa9.29□□□□□ -0.92
PCNX4-213ENST00000556907 Q96NJ1 140 aa9.28□□□□□ -0.92
PCNX4-213ENST00000556907 LINC00472Q9H8W2 130 aa9.28□□□□□ -0.92
PCNX4-213ENST00000556907 ATP5EP2Q5VTU8 51 aa9.27□□□□□ -0.93
PCNX4-213ENST00000556907 LINC00643Q86TS7 51 aa9.27□□□□□ -0.93
PCNX4-213ENST00000556907 IGLV7-46A0A075B6I9 117 aa9.26□□□□□ -0.93
PCNX4-213ENST00000556907 J3KT08 172 aa9.23□□□□□ -0.93
PCNX4-213ENST00000556907 CXCL6P80162 114 aa9.23□□□□□ -0.93
PCNX4-213ENST00000556907 TPRXLQ17RH7 258 aa9.23□□□□□ -0.93
PCNX4-213ENST00000556907 BPY2O14599 106 aa9.22□□□□□ -0.93
PCNX4-213ENST00000556907 SIGMAR1Q99720 223 aa9.22□□□□□ -0.93
PCNX4-213ENST00000556907 C1orf195Q5TG92 126 aa9.21□□□□□ -0.94
PCNX4-213ENST00000556907 IGKV4-1P06312 121 aa9.18□□□□□ -0.94
PCNX4-213ENST00000556907 LRP2P98164 4655 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms