RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 LRP1Q07954 4544 aaKnown RBP7.4□□□□□ -1.22
SHMT2-221ENST00000555773 PCLOQ9Y6V0 5065 aa7.39□□□□□ -1.23
SHMT2-221ENST00000555773 FAT3Q8TDW7 4589 aa7.39□□□□□ -1.23
SHMT2-221ENST00000555773 PRR26Q8N8Z3 221 aa7.39□□□□□ -1.23
SHMT2-221ENST00000555773 ORMDL1Q9P0S3 153 aa7.39□□□□□ -1.23
SHMT2-221ENST00000555773 MYCBP2O75592 4640 aa7.39□□□□□ -1.23
SHMT2-221ENST00000555773 A0A087X002 238 aa7.38□□□□□ -1.23
SHMT2-221ENST00000555773 TMEM256-PLSCR3K7ERE1 68 aa7.38□□□□□ -1.23
SHMT2-221ENST00000555773 KRTAP10-8P60410 259 aa7.38□□□□□ -1.23
SHMT2-221ENST00000555773 SMIM29Q86T20 159 aa7.37□□□□□ -1.23
SHMT2-221ENST00000555773 SPCS1Q9Y6A9 102 aa7.37□□□□□ -1.23
SHMT2-221ENST00000555773 KRTAP13-2Q52LG2 175 aa7.36□□□□□ -1.23
SHMT2-221ENST00000555773 SSBP3-AS1Q7Z2R9 100 aa7.36□□□□□ -1.23
SHMT2-221ENST00000555773 TYMSOSQ8TAI1 123 aa7.36□□□□□ -1.23
SHMT2-221ENST00000555773 A0A1B0GV90 55 aa7.35□□□□□ -1.23
SHMT2-221ENST00000555773 BAALC-AS2P0C853 105 aa7.35□□□□□ -1.23
SHMT2-221ENST00000555773 IGLV9-49A0A0B4J1Y8 123 aa7.34□□□□□ -1.23
SHMT2-221ENST00000555773 F8WEM9 126 aa7.34□□□□□ -1.23
SHMT2-221ENST00000555773 UBE2V1Q13404 147 aa7.34□□□□□ -1.23
SHMT2-221ENST00000555773 C3orf22Q8N5N4 141 aa7.34□□□□□ -1.23
SHMT2-221ENST00000555773 H3BMG7 143 aa7.33□□□□□ -1.24
SHMT2-221ENST00000555773 NDUFV3P56181 108 aaKnown RBP7.33□□□□□ -1.24
SHMT2-221ENST00000555773 K7EP34 96 aa7.32□□□□□ -1.24
SHMT2-221ENST00000555773 MT1HL1P0DM35 61 aa7.32□□□□□ -1.24
SHMT2-221ENST00000555773 MOBPQ13875 183 aa7.32□□□□□ -1.24
SHMT2-221ENST00000555773 C9orf153Q5TBE3 101 aa7.32□□□□□ -1.24
SHMT2-221ENST00000555773 GTF2H5Q6ZYL4 71 aa7.32□□□□□ -1.24
SHMT2-221ENST00000555773 Q8NBF4 154 aa7.32□□□□□ -1.24
SHMT2-221ENST00000555773 IGLV8-61A0A075B6I0 122 aa7.31□□□□□ -1.24
SHMT2-221ENST00000555773 C9JAW5 83 aa7.31□□□□□ -1.24
SHMT2-221ENST00000555773 J3QL48 77 aa7.31□□□□□ -1.24
SHMT2-221ENST00000555773 TNXBP22105 4242 aa7.29□□□□□ -1.24
SHMT2-221ENST00000555773 H3BT86 120 aa7.29□□□□□ -1.24
SHMT2-221ENST00000555773 Q6JHZ5 121 aa7.29□□□□□ -1.24
SHMT2-221ENST00000555773 SPAG11AQ6PDA7 123 aa7.29□□□□□ -1.24
SHMT2-221ENST00000555773 ANKRD29Q8N6D5 301 aa7.29□□□□□ -1.24
SHMT2-221ENST00000555773 C4orf48Q5BLP8 95 aa7.28□□□□□ -1.24
SHMT2-221ENST00000555773 DMBT1Q9UGM3 2413 aaPredicted RBP7.28□□□□□ -1.24
SHMT2-221ENST00000555773 LINC00304Q8N9R0 145 aa7.26□□□□□ -1.25
SHMT2-221ENST00000555773 JMJD7-PLA2G4BH0Y9G9 81 aa7.25□□□□□ -1.25
SHMT2-221ENST00000555773 RBM3P98179 157 aaKnown RBP7.25□□□□□ -1.25
SHMT2-221ENST00000555773 CD164Q04900 197 aa7.25□□□□□ -1.25
SHMT2-221ENST00000555773 SPINK1P00995 79 aa7.24□□□□□ -1.25
SHMT2-221ENST00000555773 F8W1H4 67 aa7.23□□□□□ -1.25
SHMT2-221ENST00000555773 IGFL1Q6UW32 110 aa7.23□□□□□ -1.25
SHMT2-221ENST00000555773 PRO0461Q9UI25 63 aa7.23□□□□□ -1.25
SHMT2-221ENST00000555773 MTURNQ8N3F0 131 aa7.22□□□□□ -1.25
SHMT2-221ENST00000555773 DSCR8Q96T75 97 aa7.22□□□□□ -1.25
SHMT2-221ENST00000555773 SMCPP49901 116 aaPredicted RBP7.21□□□□□ -1.26
SHMT2-221ENST00000555773 RPS29P62273 56 aaKnown RBP7.21□□□□□ -1.26
SHMT2-221ENST00000555773 OBSCN-AS1Q96MR7 158 aa7.21□□□□□ -1.26
SHMT2-221ENST00000555773 TRBV7-4A0A0J9YYF1 115 aa7.2□□□□□ -1.26
SHMT2-221ENST00000555773 PDE6GP18545 87 aa7.2□□□□□ -1.26
SHMT2-221ENST00000555773 Q6Q795 121 aa7.2□□□□□ -1.26
SHMT2-221ENST00000555773 A0A0G2JQZ4 141 aa7.19□□□□□ -1.26
SHMT2-221ENST00000555773 TEN1Q86WV5 123 aa7.19□□□□□ -1.26
SHMT2-221ENST00000555773 A0A1B0GV72 72 aa7.18□□□□□ -1.26
SHMT2-221ENST00000555773 C21orf62-AS1Q17RA5 79 aa7.18□□□□□ -1.26
SHMT2-221ENST00000555773 HRCT1Q6UXD1 115 aa7.18□□□□□ -1.26
SHMT2-221ENST00000555773 LOC110117498A0A087WWA1 95 aa7.17□□□□□ -1.26
SHMT2-221ENST00000555773 Q5XG85 94 aa7.17□□□□□ -1.26
SHMT2-221ENST00000555773 TRBV7-7A0A0K0K1E9 115 aa7.16□□□□□ -1.26
SHMT2-221ENST00000555773 LIMD2Q9BT23 127 aa7.16□□□□□ -1.26
SHMT2-221ENST00000555773 A0A1W2PNM2 257 aa7.15□□□□□ -1.26
SHMT2-221ENST00000555773 CCKP06307 115 aa7.15□□□□□ -1.26
SHMT2-221ENST00000555773 Q6ZQT0 140 aa7.14□□□□□ -1.27
SHMT2-221ENST00000555773 C14orf132Q9NPU4 83 aa7.14□□□□□ -1.27
SHMT2-221ENST00000555773 HERC1Q15751 4861 aa7.13□□□□□ -1.27
SHMT2-221ENST00000555773 A0A1B0GW54 56 aa7.13□□□□□ -1.27
SHMT2-221ENST00000555773 ETDBQ3ZM63 59 aa7.11□□□□□ -1.27
SHMT2-221ENST00000555773 VPS25Q9BRG1 176 aa7.11□□□□□ -1.27
SHMT2-221ENST00000555773 SS18L2Q9UHA2 77 aa7.11□□□□□ -1.27
SHMT2-221ENST00000555773 ASB16-AS1Q495Z4 193 aa7.1□□□□□ -1.27
SHMT2-221ENST00000555773 A0A087WSZ3 146 aa7.09□□□□□ -1.27
SHMT2-221ENST00000555773 FP248Q71RG6 208 aaPredicted RBP7.06□□□□□ -1.28
SHMT2-221ENST00000555773 C1orf195Q5TG92 126 aa7.05□□□□□ -1.28
SHMT2-221ENST00000555773 RETNLBQ9BQ08 111 aa7.04□□□□□ -1.28
SHMT2-221ENST00000555773 PRR4Q16378 134 aa7.02□□□□□ -1.29
SHMT2-221ENST00000555773 HMCN2Q8NDA2 5059 aa7.01□□□□□ -1.29
SHMT2-221ENST00000555773 IGLV7-46A0A075B6I9 117 aa7□□□□□ -1.29
SHMT2-221ENST00000555773 NREPQ16612 68 aa7□□□□□ -1.29
SHMT2-221ENST00000555773 LINC00472Q9H8W2 130 aa7□□□□□ -1.29
SHMT2-221ENST00000555773 Q96NJ1 140 aa6.98□□□□□ -1.29
SHMT2-221ENST00000555773 J3KT08 172 aa6.97□□□□□ -1.29
SHMT2-221ENST00000555773 ACYP1P07311 99 aa6.97□□□□□ -1.29
SHMT2-221ENST00000555773 FAM240AA0A1B0GVK7 77 aa6.95□□□□□ -1.3
SHMT2-221ENST00000555773 K7ERU9 68 aa6.95□□□□□ -1.3
SHMT2-221ENST00000555773 IGKV4-1P06312 121 aa6.95□□□□□ -1.3
SHMT2-221ENST00000555773 UBL5Q9BZL1 73 aa6.95□□□□□ -1.3
SHMT2-221ENST00000555773 LINC00846Q9NV44 126 aa6.95□□□□□ -1.3
SHMT2-221ENST00000555773 J3QR89 54 aa6.94□□□□□ -1.3
SHMT2-221ENST00000555773 TPRXLQ17RH7 258 aa6.93□□□□□ -1.3
SHMT2-221ENST00000555773 DEFB116Q30KQ4 102 aa6.93□□□□□ -1.3
SHMT2-221ENST00000555773 Q6ZVQ6 151 aa6.93□□□□□ -1.3
SHMT2-221ENST00000555773 KRTAP13-3Q3SY46 172 aa6.91□□□□□ -1.3
SHMT2-221ENST00000555773 SIGMAR1Q99720 223 aa6.91□□□□□ -1.3
SHMT2-221ENST00000555773 BPY2O14599 106 aa6.9□□□□□ -1.3
SHMT2-221ENST00000555773 NDUFB1O75438 58 aa6.9□□□□□ -1.3
SHMT2-221ENST00000555773 A8MWP4 228 aa6.87□□□□□ -1.31
SHMT2-221ENST00000555773 CDIP1Q9H305 208 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms