RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-222ENST00000555506 NHSQ6T4R5 1651 aa0.22□□□□□ -2.37
KTN1-222ENST00000555506 ACANP16112 2415 aa0.22□□□□□ -2.37
KTN1-222ENST00000555506 COL7A1Q02388 2944 aa0.22□□□□□ -2.37
KTN1-222ENST00000555506 PCLOQ9Y6V0 5065 aa0.22□□□□□ -2.37
KTN1-222ENST00000555506 PLXNC1O60486 1568 aa0.22□□□□□ -2.37
KTN1-222ENST00000555506 RALGAPBQ86X10 1494 aa0.22□□□□□ -2.37
KTN1-222ENST00000555506 H0YAA0 97 aa0.22□□□□□ -2.37
KTN1-222ENST00000555506 SPRR2DP22532 72 aa0.22□□□□□ -2.37
KTN1-222ENST00000555506 ENHOQ6UWT2 76 aa0.22□□□□□ -2.37
KTN1-222ENST00000555506 PRO3102Q9H379 93 aa0.22□□□□□ -2.37
KTN1-222ENST00000555506 HECTD1Q9ULT8 2610 aa0.21□□□□□ -2.38
KTN1-222ENST00000555506 FLNAP21333 2647 aaKnown RBP0.21□□□□□ -2.38
KTN1-222ENST00000555506 DEFB131BA0A096LNP1 70 aa0.21□□□□□ -2.38
KTN1-222ENST00000555506 ATXN8Q156A1 80 aa0.21□□□□□ -2.38
KTN1-222ENST00000555506 MROH1Q8NDA8 1641 aa0.2□□□□□ -2.38
KTN1-222ENST00000555506 FLNCQ14315 2725 aa0.2□□□□□ -2.38
KTN1-222ENST00000555506 HMCN2Q8NDA2 5059 aa0.2□□□□□ -2.38
KTN1-222ENST00000555506 M0R2T5 61 aa0.2□□□□□ -2.38
KTN1-222ENST00000555506 LINC00158P58513 81 aa0.2□□□□□ -2.38
KTN1-222ENST00000555506 EFCAB5A4FU69 1503 aa0.2□□□□□ -2.38
KTN1-222ENST00000555506 AKAP13Q12802 2813 aa0.2□□□□□ -2.38
KTN1-222ENST00000555506 HECTD4Q9Y4D8 3996 aa0.19□□□□□ -2.38
KTN1-222ENST00000555506 DEPDC5O75140 1603 aa0.19□□□□□ -2.38
KTN1-222ENST00000555506 CREBBPQ92793 2442 aa0.19□□□□□ -2.38
KTN1-222ENST00000555506 HFM1A2PYH4 1435 aa0.19□□□□□ -2.38
KTN1-222ENST00000555506 PCNX1Q96RV3 2341 aa0.18□□□□□ -2.38
KTN1-222ENST00000555506 HSPG2P98160 4391 aa0.18□□□□□ -2.38
KTN1-222ENST00000555506 NSD1Q96L73 2696 aaPredicted RBP0.18□□□□□ -2.38
KTN1-222ENST00000555506 FLNBO75369 2602 aaKnown RBP0.18□□□□□ -2.38
KTN1-222ENST00000555506 LYNX1G3V0Z9 82 aa0.17□□□□□ -2.38
KTN1-222ENST00000555506 UBL5Q9BZL1 73 aa0.17□□□□□ -2.38
KTN1-222ENST00000555506 PRRC2CQ9Y520 2896 aaKnown RBP0.17□□□□□ -2.38
KTN1-222ENST00000555506 THOC2Q8NI27 1593 aaKnown RBP0.16□□□□□ -2.38
KTN1-222ENST00000555506 TNRC18O15417 2968 aaPredicted RBP0.16□□□□□ -2.38
KTN1-222ENST00000555506 MRPL33O75394 65 aaKnown RBP0.16□□□□□ -2.38
KTN1-222ENST00000555506 DEFB135Q30KP9 77 aa0.16□□□□□ -2.38
KTN1-222ENST00000555506 INO80Q9ULG1 1556 aaPredicted RBP0.15□□□□□ -2.38
KTN1-222ENST00000555506 TENM2Q9NT68 2774 aa0.15□□□□□ -2.39
KTN1-222ENST00000555506 SMIM31A0A1B0GVY4 71 aa0.15□□□□□ -2.39
KTN1-222ENST00000555506 CRIP1P50238 77 aa0.15□□□□□ -2.39
KTN1-222ENST00000555506 GNG13Q9P2W3 67 aa0.15□□□□□ -2.39
KTN1-222ENST00000555506 A0A087WWC5 75 aa0.14□□□□□ -2.39
KTN1-222ENST00000555506 ETDCA0A1B0GVM5 59 aa0.14□□□□□ -2.39
KTN1-222ENST00000555506 SPTBN4Q9H254 2564 aa0.14□□□□□ -2.39
KTN1-222ENST00000555506 MUC12Q9UKN1 5478 aa0.14□□□□□ -2.39
KTN1-222ENST00000555506 COL6A3P12111 3177 aa0.14□□□□□ -2.39
KTN1-222ENST00000555506 LRP1BQ9NZR2 4599 aa0.13□□□□□ -2.39
KTN1-222ENST00000555506 DEFB114Q30KQ6 69 aa0.13□□□□□ -2.39
KTN1-222ENST00000555506 STAB1Q9NY15 2570 aa0.13□□□□□ -2.39
KTN1-222ENST00000555506 LRP2P98164 4655 aa0.12□□□□□ -2.39
KTN1-222ENST00000555506 C3P01024 1663 aa0.12□□□□□ -2.39
KTN1-222ENST00000555506 LYSTQ99698 3801 aa0.12□□□□□ -2.39
KTN1-222ENST00000555506 SPRR2BP35325 72 aa0.11□□□□□ -2.39
KTN1-222ENST00000555506 PKD1P98161 4303 aa0.11□□□□□ -2.39
KTN1-222ENST00000555506 CCDC180Q9P1Z9 1646 aa0.11□□□□□ -2.39
KTN1-222ENST00000555506 DEFB130BP0DP73 79 aa0.1□□□□□ -2.39
KTN1-222ENST00000555506 DEFB130AP0DP74 79 aa0.1□□□□□ -2.39
KTN1-222ENST00000555506 CEP290O15078 2479 aa0.1□□□□□ -2.39
KTN1-222ENST00000555506 ERICH3Q5RHP9 1530 aa0.1□□□□□ -2.39
KTN1-222ENST00000555506 LINC01549A6NIU2 74 aa0.1□□□□□ -2.39
KTN1-222ENST00000555506 IAPPP10997 89 aa0.1□□□□□ -2.39
KTN1-222ENST00000555506 SPRR2GQ9BYE4 73 aa0.1□□□□□ -2.39
KTN1-222ENST00000555506 ABCA6Q8N139 1617 aa0.09□□□□□ -2.39
KTN1-222ENST00000555506 NF1P21359 2839 aa0.09□□□□□ -2.4
KTN1-222ENST00000555506 PKD1L2Q7Z442 2459 aa0.09□□□□□ -2.4
KTN1-222ENST00000555506 H0YGG7 62 aa0.09□□□□□ -2.4
KTN1-222ENST00000555506 ZZEF1O43149 2961 aa0.09□□□□□ -2.4
KTN1-222ENST00000555506 RYR2Q92736 4967 aa0.08□□□□□ -2.4
KTN1-222ENST00000555506 ZANQ9Y493 2812 aa0.08□□□□□ -2.4
KTN1-222ENST00000555506 ABCC6O95255 1503 aa0.08□□□□□ -2.4
KTN1-222ENST00000555506 KIAA0586Q9BVV6 1533 aa0.07□□□□□ -2.4
KTN1-222ENST00000555506 MAP1AP78559 2803 aaPredicted RBP0.07□□□□□ -2.4
KTN1-222ENST00000555506 GLI2P10070 1586 aa0.07□□□□□ -2.4
KTN1-222ENST00000555506 PKHD1P08F94 4074 aa0.06□□□□□ -2.4
KTN1-222ENST00000555506 SPG11Q96JI7 2443 aa0.06□□□□□ -2.4
KTN1-222ENST00000555506 RYR1P21817 5038 aa0.06□□□□□ -2.4
KTN1-222ENST00000555506 STAB2Q8WWQ8 2551 aa0.05□□□□□ -2.4
KTN1-222ENST00000555506 SETD2Q9BYW2 2564 aaPredicted RBP0.05□□□□□ -2.4
KTN1-222ENST00000555506 ITSN2Q9NZM3 1697 aa0.05□□□□□ -2.4
KTN1-222ENST00000555506 LY75O60449 1722 aa0.04□□□□□ -2.4
KTN1-222ENST00000555506 DNAH9Q9NYC9 4486 aa0.03□□□□□ -2.4
KTN1-222ENST00000555506 TIAM1Q13009 1591 aa0.03□□□□□ -2.4
KTN1-222ENST00000555506 SONP18583 2426 aaKnown RBP0.03□□□□□ -2.41
KTN1-222ENST00000555506 S100ZQ8WXG8 99 aa0.03□□□□□ -2.41
KTN1-222ENST00000555506 EPG5Q9HCE0 2579 aa0.03□□□□□ -2.41
KTN1-222ENST00000555506 UBR4Q5T4S7 5183 aa0.02□□□□□ -2.41
KTN1-222ENST00000555506 FLGP20930 4061 aaPredicted RBP0.02□□□□□ -2.41
KTN1-222ENST00000555506 SFTA3P0C7M3 94 aa0.02□□□□□ -2.41
KTN1-222ENST00000555506 SVEP1Q4LDE5 3571 aa0.01□□□□□ -2.41
KTN1-222ENST00000555506 RPS27P42677 84 aaKnown RBP0.01□□□□□ -2.41
KTN1-222ENST00000555506 PRLHP81277 87 aa0.01□□□□□ -2.41
KTN1-222ENST00000555506 RPS27LQ71UM5 84 aaKnown RBP0.01□□□□□ -2.41
KTN1-222ENST00000555506 ALS2Q96Q42 1657 aa0.01□□□□□ -2.41
KTN1-222ENST00000555506 K7EMI3 77 aa0□□□□□ -2.41
KTN1-222ENST00000555506 TGP01266 2768 aa0□□□□□ -2.41
KTN1-222ENST00000555506 MINOS1Q5TGZ0 78 aa0□□□□□ -2.41
KTN1-222ENST00000555506 VPS13BQ7Z7G8 4022 aa0□□□□□ -2.41
KTN1-222ENST00000555506 NBEAL1Q6ZS30 2694 aa-0□□□□□ -2.41
KTN1-222ENST00000555506 ABCA10Q8WWZ4 1543 aa-0.01□□□□□ -2.41
KTN1-222ENST00000555506 S4R3F8 94 aa-0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms