RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 H3BQ85 93 aa12.16□□□□□ -0.46
FOXN3-209ENST00000555353 FAM229BQ4G0N7 80 aa12.16□□□□□ -0.46
FOXN3-209ENST00000555353 SPRR4Q96PI1 79 aa12.16□□□□□ -0.46
FOXN3-209ENST00000555353 ORMDL1Q9P0S3 153 aa12.16□□□□□ -0.46
FOXN3-209ENST00000555353 K7EP34 96 aa12.15□□□□□ -0.46
FOXN3-209ENST00000555353 DEFB105AQ8NG35 78 aa12.15□□□□□ -0.46
FOXN3-209ENST00000555353 GAGE2AQ6NT46 116 aa12.14□□□□□ -0.47
FOXN3-209ENST00000555353 IGLV5-48A0A075B6I7 105 aa12.13□□□□□ -0.47
FOXN3-209ENST00000555353 TEX49A0A1B0GTD5 131 aa12.13□□□□□ -0.47
FOXN3-209ENST00000555353 PPDPFLQ8WWR9 84 aa12.13□□□□□ -0.47
FOXN3-209ENST00000555353 H3BMG7 143 aa12.13□□□□□ -0.47
FOXN3-209ENST00000555353 TYMSOSQ8TAI1 123 aa12.13□□□□□ -0.47
FOXN3-209ENST00000555353 C9JAW5 83 aa12.1□□□□□ -0.47
FOXN3-209ENST00000555353 SPRR1BP22528 89 aa12.09□□□□□ -0.47
FOXN3-209ENST00000555353 TMEM256-PLSCR3K7ERE1 68 aa12.09□□□□□ -0.47
FOXN3-209ENST00000555353 LINC01547P58512 204 aaPredicted RBP12.09□□□□□ -0.47
FOXN3-209ENST00000555353 LINC00483Q53H64 154 aa12.09□□□□□ -0.47
FOXN3-209ENST00000555353 KRTAP13-2Q52LG2 175 aa12.08□□□□□ -0.48
FOXN3-209ENST00000555353 Q8N377 158 aa12.08□□□□□ -0.48
FOXN3-209ENST00000555353 A0A1B0GV90 55 aa12.07□□□□□ -0.48
FOXN3-209ENST00000555353 BAALC-AS2P0C853 105 aa12.07□□□□□ -0.48
FOXN3-209ENST00000555353 LAMTOR3Q9UHA4 124 aa12.06□□□□□ -0.48
FOXN3-209ENST00000555353 H3BT86 120 aa12.04□□□□□ -0.48
FOXN3-209ENST00000555353 F8WEM9 126 aa12.03□□□□□ -0.48
FOXN3-209ENST00000555353 UBE2V1Q13404 147 aa12.02□□□□□ -0.49
FOXN3-209ENST00000555353 C3orf22Q8N5N4 141 aa12.01□□□□□ -0.49
FOXN3-209ENST00000555353 HMCN2Q8NDA2 5059 aa12.01□□□□□ -0.49
FOXN3-209ENST00000555353 NDUFV3P56181 108 aaKnown RBP12□□□□□ -0.49
FOXN3-209ENST00000555353 MTURNQ8N3F0 131 aa12□□□□□ -0.49
FOXN3-209ENST00000555353 SMIM29Q86T20 159 aa11.99□□□□□ -0.49
FOXN3-209ENST00000555353 ANKRD29Q8N6D5 301 aa11.99□□□□□ -0.49
FOXN3-209ENST00000555353 LINC00304Q8N9R0 145 aa11.98□□□□□ -0.49
FOXN3-209ENST00000555353 IGLV9-49A0A0B4J1Y8 123 aa11.97□□□□□ -0.49
FOXN3-209ENST00000555353 F8W1H4 67 aa11.96□□□□□ -0.49
FOXN3-209ENST00000555353 C9orf153Q5TBE3 101 aa11.96□□□□□ -0.5
FOXN3-209ENST00000555353 PRO0461Q9UI25 63 aa11.95□□□□□ -0.5
FOXN3-209ENST00000555353 Q8NBF4 154 aa11.93□□□□□ -0.5
FOXN3-209ENST00000555353 JMJD7-PLA2G4BH0Y9G9 81 aa11.92□□□□□ -0.5
FOXN3-209ENST00000555353 MOBPQ13875 183 aa11.92□□□□□ -0.5
FOXN3-209ENST00000555353 SMCPP49901 116 aaPredicted RBP11.9□□□□□ -0.5
FOXN3-209ENST00000555353 C4orf48Q5BLP8 95 aa11.9□□□□□ -0.5
FOXN3-209ENST00000555353 SSBP3-AS1Q7Z2R9 100 aa11.9□□□□□ -0.5
FOXN3-209ENST00000555353 IGLV8-61A0A075B6I0 122 aa11.89□□□□□ -0.51
FOXN3-209ENST00000555353 Q6JHZ5 121 aa11.89□□□□□ -0.51
FOXN3-209ENST00000555353 SPAG11AQ6PDA7 123 aa11.89□□□□□ -0.51
FOXN3-209ENST00000555353 RBM3P98179 157 aaKnown RBP11.88□□□□□ -0.51
FOXN3-209ENST00000555353 A0A1B0GV72 72 aa11.88□□□□□ -0.51
FOXN3-209ENST00000555353 DSCR8Q96T75 97 aa11.86□□□□□ -0.51
FOXN3-209ENST00000555353 PRR4Q16378 134 aa11.85□□□□□ -0.51
FOXN3-209ENST00000555353 OBSCN-AS1Q96MR7 158 aa11.83□□□□□ -0.52
FOXN3-209ENST00000555353 IGFL1Q6UW32 110 aa11.82□□□□□ -0.52
FOXN3-209ENST00000555353 TEN1Q86WV5 123 aa11.82□□□□□ -0.52
FOXN3-209ENST00000555353 PDE6GP18545 87 aa11.8□□□□□ -0.52
FOXN3-209ENST00000555353 SPINK1P00995 79 aa11.79□□□□□ -0.52
FOXN3-209ENST00000555353 ETDBQ3ZM63 59 aa11.79□□□□□ -0.52
FOXN3-209ENST00000555353 TRBV7-4A0A0J9YYF1 115 aa11.79□□□□□ -0.52
FOXN3-209ENST00000555353 C21orf62-AS1Q17RA5 79 aa11.79□□□□□ -0.52
FOXN3-209ENST00000555353 C14orf132Q9NPU4 83 aa11.79□□□□□ -0.52
FOXN3-209ENST00000555353 RETNLBQ9BQ08 111 aa11.78□□□□□ -0.52
FOXN3-209ENST00000555353 LRP2P98164 4655 aa11.77□□□□□ -0.53
FOXN3-209ENST00000555353 LOC110117498A0A087WWA1 95 aa11.76□□□□□ -0.53
FOXN3-209ENST00000555353 CD164Q04900 197 aa11.75□□□□□ -0.53
FOXN3-209ENST00000555353 A0A0G2JQZ4 141 aa11.74□□□□□ -0.53
FOXN3-209ENST00000555353 CCKP06307 115 aa11.74□□□□□ -0.53
FOXN3-209ENST00000555353 Q6ZQT0 140 aa11.73□□□□□ -0.53
FOXN3-209ENST00000555353 VPS25Q9BRG1 176 aa11.72□□□□□ -0.53
FOXN3-209ENST00000555353 RPS29P62273 56 aaKnown RBP11.71□□□□□ -0.53
FOXN3-209ENST00000555353 Q6Q795 121 aa11.71□□□□□ -0.53
FOXN3-209ENST00000555353 HRCT1Q6UXD1 115 aa11.71□□□□□ -0.53
FOXN3-209ENST00000555353 A0A1W2PNM2 257 aa11.69□□□□□ -0.54
FOXN3-209ENST00000555353 LPAP08519 4548 aa11.68□□□□□ -0.54
FOXN3-209ENST00000555353 TRBV7-7A0A0K0K1E9 115 aa11.67□□□□□ -0.54
FOXN3-209ENST00000555353 UBR4Q5T4S7 5183 aa11.67□□□□□ -0.54
FOXN3-209ENST00000555353 IGLV7-46A0A075B6I9 117 aa11.66□□□□□ -0.54
FOXN3-209ENST00000555353 A0A1B0GW54 56 aa11.66□□□□□ -0.54
FOXN3-209ENST00000555353 LIMD2Q9BT23 127 aa11.65□□□□□ -0.54
FOXN3-209ENST00000555353 FP248Q71RG6 208 aaPredicted RBP11.63□□□□□ -0.55
FOXN3-209ENST00000555353 SS18L2Q9UHA2 77 aa11.62□□□□□ -0.55
FOXN3-209ENST00000555353 A0A087WSZ3 146 aa11.61□□□□□ -0.55
FOXN3-209ENST00000555353 Q5XG85 94 aa11.58□□□□□ -0.55
FOXN3-209ENST00000555353 J3QR89 54 aa11.57□□□□□ -0.56
FOXN3-209ENST00000555353 TPRXLQ17RH7 258 aa11.57□□□□□ -0.56
FOXN3-209ENST00000555353 CDIP1Q9H305 208 aa11.54□□□□□ -0.56
FOXN3-209ENST00000555353 ACYP1P07311 99 aa11.52□□□□□ -0.57
FOXN3-209ENST00000555353 ASB16-AS1Q495Z4 193 aa11.51□□□□□ -0.57
FOXN3-209ENST00000555353 FAM240AA0A1B0GVK7 77 aa11.5□□□□□ -0.57
FOXN3-209ENST00000555353 NREPQ16612 68 aa11.49□□□□□ -0.57
FOXN3-209ENST00000555353 UBL5Q9BZL1 73 aa11.47□□□□□ -0.57
FOXN3-209ENST00000555353 KRTAP13-3Q3SY46 172 aa11.46□□□□□ -0.57
FOXN3-209ENST00000555353 LINC00846Q9NV44 126 aa11.45□□□□□ -0.58
FOXN3-209ENST00000555353 K7ERU9 68 aa11.43□□□□□ -0.58
FOXN3-209ENST00000555353 C1orf195Q5TG92 126 aa11.42□□□□□ -0.58
FOXN3-209ENST00000555353 Q6ZVQ6 151 aa11.41□□□□□ -0.58
FOXN3-209ENST00000555353 LINC00472Q9H8W2 130 aa11.41□□□□□ -0.58
FOXN3-209ENST00000555353 J3KT08 172 aa11.39□□□□□ -0.59
FOXN3-209ENST00000555353 Q96NJ1 140 aa11.38□□□□□ -0.59
FOXN3-209ENST00000555353 RNF213Q63HN8 5207 aa11.37□□□□□ -0.59
FOXN3-209ENST00000555353 IGKV4-1P06312 121 aa11.37□□□□□ -0.59
FOXN3-209ENST00000555353 DEFB116Q30KQ4 102 aa11.35□□□□□ -0.59
FOXN3-209ENST00000555353 SIGMAR1Q99720 223 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms