RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 CRYGAP11844 174 aa1.71□□□□□ -2.14
CKS1BP1-201ENST00000555221 BAGE3Q86Y29 109 aa1.71□□□□□ -2.14
CKS1BP1-201ENST00000555221 CHCHD1Q96BP2 118 aaKnown RBP1.71□□□□□ -2.14
CKS1BP1-201ENST00000555221 HSPB8Q9UJY1 196 aa1.71□□□□□ -2.14
CKS1BP1-201ENST00000555221 TRAV13-1A0A0B4J241 112 aa1.7□□□□□ -2.14
CKS1BP1-201ENST00000555221 LINC00959A0A1B0GUT2 108 aa1.7□□□□□ -2.14
CKS1BP1-201ENST00000555221 CKS1BP61024 79 aa1.7□□□□□ -2.14
CKS1BP1-201ENST00000555221 CNBPP62633 177 aaKnown RBP1.7□□□□□ -2.14
CKS1BP1-201ENST00000555221 S100A12P80511 92 aa1.7□□□□□ -2.14
CKS1BP1-201ENST00000555221 ENHOQ6UWT2 76 aa1.7□□□□□ -2.14
CKS1BP1-201ENST00000555221 Q8N814 137 aa1.7□□□□□ -2.14
CKS1BP1-201ENST00000555221 RPL39LQ96EH5 51 aaKnown RBP1.7□□□□□ -2.14
CKS1BP1-201ENST00000555221 HSPG2P98160 4391 aa1.7□□□□□ -2.14
CKS1BP1-201ENST00000555221 PLECQ15149 4684 aaKnown RBP1.69□□□□□ -2.14
CKS1BP1-201ENST00000555221 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.69□□□□□ -2.14
CKS1BP1-201ENST00000555221 TRBV30A0A0K0K1B3 111 aa1.69□□□□□ -2.14
CKS1BP1-201ENST00000555221 LOC107984640A0A0U1RRK4 108 aa1.69□□□□□ -2.14
CKS1BP1-201ENST00000555221 LINC01546A6NGU7 62 aa1.69□□□□□ -2.14
CKS1BP1-201ENST00000555221 NDUFA1O15239 70 aa1.69□□□□□ -2.14
CKS1BP1-201ENST00000555221 HBDP02042 147 aa1.69□□□□□ -2.14
CKS1BP1-201ENST00000555221 CIRBPQ14011 172 aaKnown RBP1.69□□□□□ -2.14
CKS1BP1-201ENST00000555221 COX17Q14061 63 aa1.69□□□□□ -2.14
CKS1BP1-201ENST00000555221 COPS9Q8WXC6 57 aa1.69□□□□□ -2.14
CKS1BP1-201ENST00000555221 SIGMAR1Q99720 223 aa1.69□□□□□ -2.14
CKS1BP1-201ENST00000555221 UBE2D4Q9Y2X8 147 aa1.69□□□□□ -2.14
CKS1BP1-201ENST00000555221 DYNC1H1Q14204 4646 aaKnown RBP1.69□□□□□ -2.14
CKS1BP1-201ENST00000555221 MYCBP2O75592 4640 aa1.69□□□□□ -2.14
CKS1BP1-201ENST00000555221 FAT2Q9NYQ8 4349 aa1.69□□□□□ -2.14
CKS1BP1-201ENST00000555221 GVQW2A0A096LPI5 108 aaPredicted RBP1.68□□□□□ -2.14
CKS1BP1-201ENST00000555221 TRAV12-1A0A0B4J245 112 aa1.68□□□□□ -2.14
CKS1BP1-201ENST00000555221 C20orf202A1L168 122 aa1.68□□□□□ -2.14
CKS1BP1-201ENST00000555221 IGIPA6NJ69 53 aa1.68□□□□□ -2.14
CKS1BP1-201ENST00000555221 LEPROTL1O95214 131 aa1.68□□□□□ -2.14
CKS1BP1-201ENST00000555221 BAALC-AS2P0C853 105 aa1.68□□□□□ -2.14
CKS1BP1-201ENST00000555221 PLNP26678 52 aa1.68□□□□□ -2.14
CKS1BP1-201ENST00000555221 NDUFA6P56556 154 aa1.68□□□□□ -2.14
CKS1BP1-201ENST00000555221 LINC01554Q52M75 96 aa1.68□□□□□ -2.14
CKS1BP1-201ENST00000555221 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.68□□□□□ -2.14
CKS1BP1-201ENST00000555221 Q8IZM0 81 aa1.68□□□□□ -2.14
CKS1BP1-201ENST00000555221 CARD19Q96LW7 228 aa1.68□□□□□ -2.14
CKS1BP1-201ENST00000555221 AMELXQ99217 191 aa1.68□□□□□ -2.14
CKS1BP1-201ENST00000555221 NHP2Q9NX24 153 aaKnown RBP1.68□□□□□ -2.14
CKS1BP1-201ENST00000555221 MRPL35Q9NZE8 188 aaKnown RBP1.68□□□□□ -2.14
CKS1BP1-201ENST00000555221 SNURFQ9Y675 71 aa1.68□□□□□ -2.14
CKS1BP1-201ENST00000555221 F8VRH5 84 aa1.67□□□□□ -2.14
CKS1BP1-201ENST00000555221 TRGC2P03986 189 aa1.67□□□□□ -2.14
CKS1BP1-201ENST00000555221 ADCYAP1P18509 176 aa1.67□□□□□ -2.14
CKS1BP1-201ENST00000555221 UBE2D1P51668 147 aa1.67□□□□□ -2.14
CKS1BP1-201ENST00000555221 RPL39P62891 51 aaKnown RBP1.67□□□□□ -2.14
CKS1BP1-201ENST00000555221 Q6Q795 121 aa1.67□□□□□ -2.14
CKS1BP1-201ENST00000555221 CLPSL2Q6UWE3 100 aa1.67□□□□□ -2.14
CKS1BP1-201ENST00000555221 C5orf38Q86SI9 138 aa1.67□□□□□ -2.14
CKS1BP1-201ENST00000555221 C18orf32Q8TCD1 76 aa1.67□□□□□ -2.14
CKS1BP1-201ENST00000555221 DEFB104AQ8WTQ1 72 aa1.67□□□□□ -2.14
CKS1BP1-201ENST00000555221 IFI27L1Q96BM0 104 aa1.67□□□□□ -2.14
CKS1BP1-201ENST00000555221 PLEKHB2Q96CS7 222 aa1.67□□□□□ -2.14
CKS1BP1-201ENST00000555221 DNAH11Q96DT5 4516 aa1.67□□□□□ -2.14
CKS1BP1-201ENST00000555221 FLG2Q5D862 2391 aaPredicted RBP1.66□□□□□ -2.14
CKS1BP1-201ENST00000555221 MYMXA0A1B0GTQ4 84 aa1.66□□□□□ -2.14
CKS1BP1-201ENST00000555221 SNCGO76070 127 aa1.66□□□□□ -2.14
CKS1BP1-201ENST00000555221 DPM2O94777 84 aa1.66□□□□□ -2.14
CKS1BP1-201ENST00000555221 SPAG11BQ08648 103 aa1.66□□□□□ -2.14
CKS1BP1-201ENST00000555221 TMEM170BQ5T4T1 132 aa1.66□□□□□ -2.14
CKS1BP1-201ENST00000555221 KRTAP26-1Q6PEX3 210 aa1.66□□□□□ -2.14
CKS1BP1-201ENST00000555221 Q6ZUT4 128 aa1.66□□□□□ -2.14
CKS1BP1-201ENST00000555221 COX7B2Q8TF08 81 aa1.66□□□□□ -2.14
CKS1BP1-201ENST00000555221 TOMM7Q9P0U1 55 aa1.66□□□□□ -2.14
CKS1BP1-201ENST00000555221 CRCT1Q9UGL9 99 aa1.66□□□□□ -2.14
CKS1BP1-201ENST00000555221 SSPOA2VEC9 5147 aa1.65□□□□□ -2.14
CKS1BP1-201ENST00000555221 IGKCP01834 107 aa1.65□□□□□ -2.15
CKS1BP1-201ENST00000555221 IGLC3P0DOY3 106 aa1.65□□□□□ -2.15
CKS1BP1-201ENST00000555221 COX6A2Q02221 97 aa1.65□□□□□ -2.15
CKS1BP1-201ENST00000555221 PMCHL1Q16048 86 aa1.65□□□□□ -2.15
CKS1BP1-201ENST00000555221 MEIG1Q5JSS6 88 aa1.65□□□□□ -2.15
CKS1BP1-201ENST00000555221 LCA10Q71F78 164 aa1.65□□□□□ -2.15
CKS1BP1-201ENST00000555221 PLAC8Q9NZF1 115 aa1.65□□□□□ -2.15
CKS1BP1-201ENST00000555221 CDKN2A-AS1Q9UH64 79 aa1.65□□□□□ -2.15
CKS1BP1-201ENST00000555221 STARD9Q9P2P6 4700 aa1.65□□□□□ -2.15
CKS1BP1-201ENST00000555221 IGKV2D-26A0A0A0MRZ7 120 aa1.64□□□□□ -2.15
CKS1BP1-201ENST00000555221 NUPR1O60356 82 aa1.64□□□□□ -2.15
CKS1BP1-201ENST00000555221 FABP4P15090 132 aa1.64□□□□□ -2.15
CKS1BP1-201ENST00000555221 LINC00158P58513 81 aa1.64□□□□□ -2.15
CKS1BP1-201ENST00000555221 CTAG1AP78358 180 aa1.64□□□□□ -2.15
CKS1BP1-201ENST00000555221 LYRM7Q5U5X0 104 aa1.64□□□□□ -2.15
CKS1BP1-201ENST00000555221 LINC00526Q96FQ7 95 aa1.64□□□□□ -2.15
CKS1BP1-201ENST00000555221 HIST1H2BLQ99880 126 aa1.64□□□□□ -2.15
CKS1BP1-201ENST00000555221 ALMS1Q8TCU4 4167 aa1.64□□□□□ -2.15
CKS1BP1-201ENST00000555221 VPS13DQ5THJ4 4388 aa1.63□□□□□ -2.15
CKS1BP1-201ENST00000555221 SYS1-DBNDD2H3BUS1 97 aa1.63□□□□□ -2.15
CKS1BP1-201ENST00000555221 HIST1H2BKO60814 126 aa1.63□□□□□ -2.15
CKS1BP1-201ENST00000555221 HIST1H2BJP06899 126 aa1.63□□□□□ -2.15
CKS1BP1-201ENST00000555221 RPL37AP61513 92 aaKnown RBP1.63□□□□□ -2.15
CKS1BP1-201ENST00000555221 UBE2BP63146 152 aa1.63□□□□□ -2.15
CKS1BP1-201ENST00000555221 LINC01545Q5VT33 79 aa1.63□□□□□ -2.15
CKS1BP1-201ENST00000555221 SPINK6Q6UWN8 80 aa1.63□□□□□ -2.15
CKS1BP1-201ENST00000555221 FAM19A2Q8N3H0 131 aa1.63□□□□□ -2.15
CKS1BP1-201ENST00000555221 DIRC1Q969H9 104 aa1.63□□□□□ -2.15
CKS1BP1-201ENST00000555221 NDUFA12Q9UI09 145 aa1.63□□□□□ -2.15
CKS1BP1-201ENST00000555221 FAT1Q14517 4588 aa1.63□□□□□ -2.15
CKS1BP1-201ENST00000555221 TMEM238C9JI98 176 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms