RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 LINC00474Q9P2X8 69 aa5.6□□□□□ -1.51
TDP1-210ENST00000554976 C3orf84H3BNL1 204 aa5.59□□□□□ -1.51
TDP1-210ENST00000554976 NDUFC1O43677 76 aa5.59□□□□□ -1.51
TDP1-210ENST00000554976 CHTF8P0CG12 524 aa5.59□□□□□ -1.51
TDP1-210ENST00000554976 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.59□□□□□ -1.51
TDP1-210ENST00000554976 Q6ZRX8 168 aa5.59□□□□□ -1.51
TDP1-210ENST00000554976 SPACA4Q8TDM5 124 aa5.59□□□□□ -1.51
TDP1-210ENST00000554976 RPL37AP8A6NKH3 93 aa5.59□□□□□ -1.51
TDP1-210ENST00000554976 TMEM256-PLSCR3K7ERE1 68 aa5.59□□□□□ -1.51
TDP1-210ENST00000554976 C14orf132Q9NPU4 83 aa5.59□□□□□ -1.51
TDP1-210ENST00000554976 KRTAP3-3Q9BYR6 98 aa5.58□□□□□ -1.52
TDP1-210ENST00000554976 KRTAP3-2Q9BYR7 98 aa5.58□□□□□ -1.52
TDP1-210ENST00000554976 Q6ZQY7 126 aa5.58□□□□□ -1.52
TDP1-210ENST00000554976 RBM3P98179 157 aaKnown RBP5.57□□□□□ -1.52
TDP1-210ENST00000554976 C1orf134Q5TEV5 83 aa5.57□□□□□ -1.52
TDP1-210ENST00000554976 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.57□□□□□ -1.52
TDP1-210ENST00000554976 F8WEM9 126 aa5.56□□□□□ -1.52
TDP1-210ENST00000554976 H3BQ85 93 aa5.56□□□□□ -1.52
TDP1-210ENST00000554976 RTL8CO15255 209 aa5.56□□□□□ -1.52
TDP1-210ENST00000554976 IGKV2-24A0A0C4DH68 120 aa5.56□□□□□ -1.52
TDP1-210ENST00000554976 LY6G6CO95867 125 aa5.56□□□□□ -1.52
TDP1-210ENST00000554976 REG3GQ6UW15 175 aa5.56□□□□□ -1.52
TDP1-210ENST00000554976 IGLV5-48A0A075B6I7 105 aa5.55□□□□□ -1.52
TDP1-210ENST00000554976 LOC110117498A0A087WWA1 95 aa5.55□□□□□ -1.52
TDP1-210ENST00000554976 FUSP35637 526 aaKnown RBP eCLIP5.55□□□□□ -1.52
TDP1-210ENST00000554976 PHF5AQ7RTV0 110 aaKnown RBP5.55□□□□□ -1.52
TDP1-210ENST00000554976 JMJD7-PLA2G4BH0Y9G9 81 aa5.55□□□□□ -1.52
TDP1-210ENST00000554976 TNP2Q05952 138 aa5.54□□□□□ -1.52
TDP1-210ENST00000554976 KRTAP13-1Q8IUC0 172 aa5.54□□□□□ -1.52
TDP1-210ENST00000554976 DHRS4-AS1Q9P1J3 65 aa5.54□□□□□ -1.52
TDP1-210ENST00000554976 Q8N377 158 aa5.54□□□□□ -1.52
TDP1-210ENST00000554976 ERC2-IT1O76042 136 aa5.53□□□□□ -1.52
TDP1-210ENST00000554976 Q6ZQT0 140 aa5.53□□□□□ -1.52
TDP1-210ENST00000554976 TRBV7-4A0A0J9YYF1 115 aa5.53□□□□□ -1.52
TDP1-210ENST00000554976 H0Y9J4 135 aa5.53□□□□□ -1.52
TDP1-210ENST00000554976 TGP01266 2768 aa5.53□□□□□ -1.52
TDP1-210ENST00000554976 PLAC8Q9NZF1 115 aa5.53□□□□□ -1.52
TDP1-210ENST00000554976 RYR2Q92736 4967 aa5.52□□□□□ -1.53
TDP1-210ENST00000554976 SNURFQ9Y675 71 aa5.51□□□□□ -1.53
TDP1-210ENST00000554976 ETDCA0A1B0GVM5 59 aa5.51□□□□□ -1.53
TDP1-210ENST00000554976 KRTAP10-2P60368 255 aa5.5□□□□□ -1.53
TDP1-210ENST00000554976 FAM229BQ4G0N7 80 aa5.5□□□□□ -1.53
TDP1-210ENST00000554976 SMIM29Q86T20 159 aa5.5□□□□□ -1.53
TDP1-210ENST00000554976 ST20-AS1Q8NBB2 130 aa5.5□□□□□ -1.53
TDP1-210ENST00000554976 MPLKIPQ8TAP9 179 aa5.5□□□□□ -1.53
TDP1-210ENST00000554976 IGLV5-52A0A0A0MRZ9 124 aa5.49□□□□□ -1.53
TDP1-210ENST00000554976 UBL5Q9BZL1 73 aa5.49□□□□□ -1.53
TDP1-210ENST00000554976 Q6ZSA8 131 aa5.49□□□□□ -1.53
TDP1-210ENST00000554976 PRLHP81277 87 aa5.48□□□□□ -1.53
TDP1-210ENST00000554976 SPRR1BP22528 89 aa5.47□□□□□ -1.53
TDP1-210ENST00000554976 IGLV8-61A0A075B6I0 122 aa5.45□□□□□ -1.54
TDP1-210ENST00000554976 FAM30AQ9NZY2 134 aa5.45□□□□□ -1.54
TDP1-210ENST00000554976 LCE6AA0A183 80 aa5.45□□□□□ -1.54
TDP1-210ENST00000554976 PDE6GP18545 87 aa5.45□□□□□ -1.54
TDP1-210ENST00000554976 UBE2BP63146 152 aa5.45□□□□□ -1.54
TDP1-210ENST00000554976 Q1T7F1 81 aa5.45□□□□□ -1.54
TDP1-210ENST00000554976 PKHD1P08F94 4074 aa5.44□□□□□ -1.54
TDP1-210ENST00000554976 KRTAP10-1P60331 282 aa5.43□□□□□ -1.54
TDP1-210ENST00000554976 DEFB105AQ8NG35 78 aa5.43□□□□□ -1.54
TDP1-210ENST00000554976 TMEM254Q8TBM7 123 aa5.43□□□□□ -1.54
TDP1-210ENST00000554976 LRP1BQ9NZR2 4599 aa5.43□□□□□ -1.54
TDP1-210ENST00000554976 CXCL6P80162 114 aa5.43□□□□□ -1.54
TDP1-210ENST00000554976 PSORS1C2Q9UIG4 136 aa5.43□□□□□ -1.54
TDP1-210ENST00000554976 A0A1B0GVY2 172 aa5.42□□□□□ -1.54
TDP1-210ENST00000554976 LINC00483Q53H64 154 aa5.42□□□□□ -1.54
TDP1-210ENST00000554976 KMT2CQ8NEZ4 4911 aaKnown RBP5.42□□□□□ -1.54
TDP1-210ENST00000554976 RBM12B-AS1Q9P1G2 102 aa5.42□□□□□ -1.54
TDP1-210ENST00000554976 A0A1W2PNM2 257 aa5.41□□□□□ -1.54
TDP1-210ENST00000554976 KTN1-AS1Q86SY8 53 aa5.41□□□□□ -1.54
TDP1-210ENST00000554976 NREPQ16612 68 aa5.41□□□□□ -1.54
TDP1-210ENST00000554976 CIRBP-AS1Q8TBR5 109 aa5.41□□□□□ -1.54
TDP1-210ENST00000554976 SPRR4Q96PI1 79 aa5.41□□□□□ -1.54
TDP1-210ENST00000554976 DYNC1H1Q14204 4646 aaKnown RBP5.4□□□□□ -1.54
TDP1-210ENST00000554976 PKHD1L1Q86WI1 4243 aa5.4□□□□□ -1.55
TDP1-210ENST00000554976 HIGD2AQ9BW72 106 aa5.4□□□□□ -1.55
TDP1-210ENST00000554976 hDV103S1A0JD37 113 aa5.39□□□□□ -1.55
TDP1-210ENST00000554976 VPS13BQ7Z7G8 4022 aa5.39□□□□□ -1.55
TDP1-210ENST00000554976 UBE2AP49459 152 aa5.39□□□□□ -1.55
TDP1-210ENST00000554976 Q6ZVQ6 151 aa5.39□□□□□ -1.55
TDP1-210ENST00000554976 SCXQ7RTU7 201 aa5.39□□□□□ -1.55
TDP1-210ENST00000554976 APOBP04114 4563 aaKnown RBP5.39□□□□□ -1.55
TDP1-210ENST00000554976 A0A1B0GW54 56 aa5.38□□□□□ -1.55
TDP1-210ENST00000554976 C1orf137Q5JT78 98 aa5.38□□□□□ -1.55
TDP1-210ENST00000554976 IGFL1Q6UW32 110 aa5.38□□□□□ -1.55
TDP1-210ENST00000554976 Q8NBF4 154 aa5.38□□□□□ -1.55
TDP1-210ENST00000554976 ZNF861PO60384 105 aa5.37□□□□□ -1.55
TDP1-210ENST00000554976 IGLV7-43P04211 117 aa5.36□□□□□ -1.55
TDP1-210ENST00000554976 HAMPP81172 84 aa5.36□□□□□ -1.55
TDP1-210ENST00000554976 SRRM2Q9UQ35 2752 aaKnown RBP5.36□□□□□ -1.55
TDP1-210ENST00000554976 J3QL48 77 aa5.36□□□□□ -1.55
TDP1-210ENST00000554976 A0A0G2JQZ4 141 aa5.35□□□□□ -1.55
TDP1-210ENST00000554976 BPY2O14599 106 aa5.35□□□□□ -1.55
TDP1-210ENST00000554976 NDUFS5O43920 106 aa5.34□□□□□ -1.55
TDP1-210ENST00000554976 RYR3Q15413 4870 aa5.34□□□□□ -1.55
TDP1-210ENST00000554976 TRAV22A0A0B4J277 110 aa5.34□□□□□ -1.56
TDP1-210ENST00000554976 OCR1Q9BZK8 76 aa5.34□□□□□ -1.56
TDP1-210ENST00000554976 PSPHP1O15172 72 aa5.31□□□□□ -1.56
TDP1-210ENST00000554976 ZNF706Q9Y5V0 76 aaPredicted RBP5.31□□□□□ -1.56
TDP1-210ENST00000554976 RPL37AP61513 92 aaKnown RBP5.31□□□□□ -1.56
TDP1-210ENST00000554976 C1orf64Q8NEQ6 169 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 177.9 ms