RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 MT1HL1P0DM35 61 aa9.72□□□□□ -0.85
SPTLC2-203ENST00000554901 Q8N377 158 aa9.72□□□□□ -0.85
SPTLC2-203ENST00000554901 NAA38Q9BRA0 125 aaKnown RBP9.72□□□□□ -0.85
SPTLC2-203ENST00000554901 LAMTOR3Q9UHA4 124 aa9.72□□□□□ -0.85
SPTLC2-203ENST00000554901 H3BQ85 93 aa9.71□□□□□ -0.86
SPTLC2-203ENST00000554901 KRTAP13-2Q52LG2 175 aa9.71□□□□□ -0.86
SPTLC2-203ENST00000554901 TRBV20-1A0A075B6N2 111 aa9.7□□□□□ -0.86
SPTLC2-203ENST00000554901 J3QL48 77 aa9.7□□□□□ -0.86
SPTLC2-203ENST00000554901 TYMSOSQ8TAI1 123 aa9.7□□□□□ -0.86
SPTLC2-203ENST00000554901 GTF2H5Q6ZYL4 71 aa9.69□□□□□ -0.86
SPTLC2-203ENST00000554901 A0A1W2PPM0 123 aa9.68□□□□□ -0.86
SPTLC2-203ENST00000554901 ATXN8Q156A1 80 aa9.68□□□□□ -0.86
SPTLC2-203ENST00000554901 SMIM29Q86T20 159 aa9.67□□□□□ -0.86
SPTLC2-203ENST00000554901 C3orf22Q8N5N4 141 aa9.67□□□□□ -0.86
SPTLC2-203ENST00000554901 ORMDL1Q9P0S3 153 aa9.67□□□□□ -0.86
SPTLC2-203ENST00000554901 DMBT1Q9UGM3 2413 aaPredicted RBP9.67□□□□□ -0.86
SPTLC2-203ENST00000554901 TCL1BO95988 128 aa9.66□□□□□ -0.86
SPTLC2-203ENST00000554901 FABP2P12104 132 aa9.66□□□□□ -0.86
SPTLC2-203ENST00000554901 SSBP3-AS1Q7Z2R9 100 aa9.66□□□□□ -0.86
SPTLC2-203ENST00000554901 IGLV9-49A0A0B4J1Y8 123 aa9.66□□□□□ -0.86
SPTLC2-203ENST00000554901 Q8NBF4 154 aa9.65□□□□□ -0.86
SPTLC2-203ENST00000554901 K7ERU9 68 aa9.64□□□□□ -0.87
SPTLC2-203ENST00000554901 MOBPQ13875 183 aa9.64□□□□□ -0.87
SPTLC2-203ENST00000554901 LCE2DQ5TA82 110 aaPredicted RBP9.64□□□□□ -0.87
SPTLC2-203ENST00000554901 F8WEM9 126 aa9.63□□□□□ -0.87
SPTLC2-203ENST00000554901 TMEM256-PLSCR3K7ERE1 68 aa9.63□□□□□ -0.87
SPTLC2-203ENST00000554901 PCP4P48539 62 aa9.63□□□□□ -0.87
SPTLC2-203ENST00000554901 C9orf153Q5TBE3 101 aa9.63□□□□□ -0.87
SPTLC2-203ENST00000554901 TNXBP22105 4242 aa9.6□□□□□ -0.87
SPTLC2-203ENST00000554901 IGLV8-61A0A075B6I0 122 aa9.6□□□□□ -0.87
SPTLC2-203ENST00000554901 SPAG11AQ6PDA7 123 aa9.6□□□□□ -0.87
SPTLC2-203ENST00000554901 NDUFV3P56181 108 aaKnown RBP9.59□□□□□ -0.87
SPTLC2-203ENST00000554901 LINC00304Q8N9R0 145 aa9.59□□□□□ -0.87
SPTLC2-203ENST00000554901 K7EP34 96 aa9.58□□□□□ -0.88
SPTLC2-203ENST00000554901 SPCS1Q9Y6A9 102 aa9.58□□□□□ -0.88
SPTLC2-203ENST00000554901 BAALC-AS2P0C853 105 aa9.57□□□□□ -0.88
SPTLC2-203ENST00000554901 Q6JHZ5 121 aa9.57□□□□□ -0.88
SPTLC2-203ENST00000554901 VPS25Q9BRG1 176 aa9.57□□□□□ -0.88
SPTLC2-203ENST00000554901 C4orf48Q5BLP8 95 aa9.56□□□□□ -0.88
SPTLC2-203ENST00000554901 C9JAW5 83 aa9.54□□□□□ -0.88
SPTLC2-203ENST00000554901 H3BMG7 143 aa9.54□□□□□ -0.88
SPTLC2-203ENST00000554901 SPINK1P00995 79 aa9.54□□□□□ -0.88
SPTLC2-203ENST00000554901 CD164Q04900 197 aa9.53□□□□□ -0.88
SPTLC2-203ENST00000554901 RPS29P62273 56 aaKnown RBP9.52□□□□□ -0.88
SPTLC2-203ENST00000554901 ANKRD29Q8N6D5 301 aa9.52□□□□□ -0.88
SPTLC2-203ENST00000554901 H3BT86 120 aa9.51□□□□□ -0.89
SPTLC2-203ENST00000554901 IGFL1Q6UW32 110 aa9.49□□□□□ -0.89
SPTLC2-203ENST00000554901 C21orf62-AS1Q17RA5 79 aa9.48□□□□□ -0.89
SPTLC2-203ENST00000554901 JMJD7-PLA2G4BH0Y9G9 81 aa9.47□□□□□ -0.89
SPTLC2-203ENST00000554901 J3QR89 54 aa9.46□□□□□ -0.89
SPTLC2-203ENST00000554901 RBM3P98179 157 aaKnown RBP9.46□□□□□ -0.89
SPTLC2-203ENST00000554901 Q6Q795 121 aa9.45□□□□□ -0.9
SPTLC2-203ENST00000554901 F8W1H4 67 aa9.44□□□□□ -0.9
SPTLC2-203ENST00000554901 LIMD2Q9BT23 127 aa9.44□□□□□ -0.9
SPTLC2-203ENST00000554901 A0A0G2JQZ4 141 aa9.43□□□□□ -0.9
SPTLC2-203ENST00000554901 TRBV7-4A0A0J9YYF1 115 aa9.43□□□□□ -0.9
SPTLC2-203ENST00000554901 Q5XG85 94 aa9.43□□□□□ -0.9
SPTLC2-203ENST00000554901 TEN1Q86WV5 123 aa9.43□□□□□ -0.9
SPTLC2-203ENST00000554901 DSCR8Q96T75 97 aa9.43□□□□□ -0.9
SPTLC2-203ENST00000554901 HRCT1Q6UXD1 115 aa9.42□□□□□ -0.9
SPTLC2-203ENST00000554901 MTURNQ8N3F0 131 aa9.41□□□□□ -0.9
SPTLC2-203ENST00000554901 OBSCN-AS1Q96MR7 158 aa9.41□□□□□ -0.9
SPTLC2-203ENST00000554901 PRO0461Q9UI25 63 aa9.41□□□□□ -0.9
SPTLC2-203ENST00000554901 TRBV7-7A0A0K0K1E9 115 aa9.4□□□□□ -0.91
SPTLC2-203ENST00000554901 A0A1B0GV72 72 aa9.4□□□□□ -0.91
SPTLC2-203ENST00000554901 PDE6GP18545 87 aa9.4□□□□□ -0.91
SPTLC2-203ENST00000554901 HERC1Q15751 4861 aa9.4□□□□□ -0.91
SPTLC2-203ENST00000554901 SMCPP49901 116 aaPredicted RBP9.38□□□□□ -0.91
SPTLC2-203ENST00000554901 LOC110117498A0A087WWA1 95 aa9.37□□□□□ -0.91
SPTLC2-203ENST00000554901 A0A1W2PNM2 257 aa9.37□□□□□ -0.91
SPTLC2-203ENST00000554901 SCGB1A1P11684 91 aa9.37□□□□□ -0.91
SPTLC2-203ENST00000554901 CCKP06307 115 aa9.36□□□□□ -0.91
SPTLC2-203ENST00000554901 ASB16-AS1Q495Z4 193 aa9.35□□□□□ -0.91
SPTLC2-203ENST00000554901 SS18L2Q9UHA2 77 aa9.35□□□□□ -0.91
SPTLC2-203ENST00000554901 A0A1B0GW54 56 aa9.34□□□□□ -0.91
SPTLC2-203ENST00000554901 Q6ZQT0 140 aa9.34□□□□□ -0.91
SPTLC2-203ENST00000554901 FP248Q71RG6 208 aaPredicted RBP9.33□□□□□ -0.92
SPTLC2-203ENST00000554901 C14orf132Q9NPU4 83 aa9.33□□□□□ -0.92
SPTLC2-203ENST00000554901 SIGMAR1Q99720 223 aa9.31□□□□□ -0.92
SPTLC2-203ENST00000554901 A0A087WSZ3 146 aa9.31□□□□□ -0.92
SPTLC2-203ENST00000554901 RETNLBQ9BQ08 111 aa9.3□□□□□ -0.92
SPTLC2-203ENST00000554901 PRR4Q16378 134 aa9.28□□□□□ -0.92
SPTLC2-203ENST00000554901 C1orf195Q5TG92 126 aa9.26□□□□□ -0.93
SPTLC2-203ENST00000554901 ETDBQ3ZM63 59 aa9.25□□□□□ -0.93
SPTLC2-203ENST00000554901 IGLV7-46A0A075B6I9 117 aa9.24□□□□□ -0.93
SPTLC2-203ENST00000554901 HMCN2Q8NDA2 5059 aa9.21□□□□□ -0.94
SPTLC2-203ENST00000554901 TPRXLQ17RH7 258 aa9.2□□□□□ -0.94
SPTLC2-203ENST00000554901 Q96NJ1 140 aa9.18□□□□□ -0.94
SPTLC2-203ENST00000554901 LINC00472Q9H8W2 130 aa9.17□□□□□ -0.94
SPTLC2-203ENST00000554901 KRTAP13-3Q3SY46 172 aa9.14□□□□□ -0.95
SPTLC2-203ENST00000554901 J3KT08 172 aa9.13□□□□□ -0.95
SPTLC2-203ENST00000554901 NREPQ16612 68 aa9.13□□□□□ -0.95
SPTLC2-203ENST00000554901 IGKV4-1P06312 121 aa9.1□□□□□ -0.95
SPTLC2-203ENST00000554901 CDIP1Q9H305 208 aa9.07□□□□□ -0.96
SPTLC2-203ENST00000554901 ACYP1P07311 99 aa9.06□□□□□ -0.96
SPTLC2-203ENST00000554901 DEFB116Q30KQ4 102 aa9.06□□□□□ -0.96
SPTLC2-203ENST00000554901 UBL5Q9BZL1 73 aa9.06□□□□□ -0.96
SPTLC2-203ENST00000554901 LINC00846Q9NV44 126 aa9.06□□□□□ -0.96
SPTLC2-203ENST00000554901 FAM240AA0A1B0GVK7 77 aa9.05□□□□□ -0.96
SPTLC2-203ENST00000554901 Q6ZVQ6 151 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms