RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 GAGE2AQ6NT46 116 aa7.65□□□□□ -1.18
SHMT2-214ENST00000554604 FAM19A5Q7Z5A7 132 aaPredicted RBP7.65□□□□□ -1.18
SHMT2-214ENST00000554604 MRPL55Q7Z7F7 128 aaKnown RBP7.65□□□□□ -1.18
SHMT2-214ENST00000554604 PSORS1C2Q9UIG4 136 aa7.65□□□□□ -1.18
SHMT2-214ENST00000554604 KRTAP4-16G5E9R7 235 aaPredicted RBP7.64□□□□□ -1.19
SHMT2-214ENST00000554604 CCKP06307 115 aa7.63□□□□□ -1.19
SHMT2-214ENST00000554604 C1orf137Q5JT78 98 aa7.63□□□□□ -1.19
SHMT2-214ENST00000554604 LINC00643Q86TS7 51 aa7.62□□□□□ -1.19
SHMT2-214ENST00000554604 LOC110117498A0A087WWA1 95 aa7.61□□□□□ -1.19
SHMT2-214ENST00000554604 RPL37AP8A6NKH3 93 aa7.61□□□□□ -1.19
SHMT2-214ENST00000554604 B5MCH6 92 aa7.61□□□□□ -1.19
SHMT2-214ENST00000554604 RBM3P98179 157 aaKnown RBP7.61□□□□□ -1.19
SHMT2-214ENST00000554604 Q6Q795 121 aa7.61□□□□□ -1.19
SHMT2-214ENST00000554604 Q6ZRX8 168 aa7.61□□□□□ -1.19
SHMT2-214ENST00000554604 DHRS4-AS1Q9P1J3 65 aa7.61□□□□□ -1.19
SHMT2-214ENST00000554604 LAMTOR3Q9UHA4 124 aa7.61□□□□□ -1.19
SHMT2-214ENST00000554604 ETDCA0A1B0GVM5 59 aa7.6□□□□□ -1.19
SHMT2-214ENST00000554604 PDE6GP18545 87 aa7.6□□□□□ -1.19
SHMT2-214ENST00000554604 UBE2BP63146 152 aa7.6□□□□□ -1.19
SHMT2-214ENST00000554604 C21orf62-AS1Q17RA5 79 aa7.59□□□□□ -1.19
SHMT2-214ENST00000554604 SMCR5Q8TEV8 140 aa7.59□□□□□ -1.19
SHMT2-214ENST00000554604 TRBV7-7A0A0K0K1E9 115 aa7.58□□□□□ -1.2
SHMT2-214ENST00000554604 Q6ZQT0 140 aa7.58□□□□□ -1.2
SHMT2-214ENST00000554604 A0A1B0GV72 72 aa7.57□□□□□ -1.2
SHMT2-214ENST00000554604 IGLV7-43P04211 117 aa7.57□□□□□ -1.2
SHMT2-214ENST00000554604 NDUFV3P56181 108 aaKnown RBP7.57□□□□□ -1.2
SHMT2-214ENST00000554604 KRTAP11-1Q8IUC1 163 aa7.57□□□□□ -1.2
SHMT2-214ENST00000554604 IMUPQ9GZP8 106 aa7.57□□□□□ -1.2
SHMT2-214ENST00000554604 DSCR8Q96T75 97 aa7.56□□□□□ -1.2
SHMT2-214ENST00000554604 Q9BRP9 147 aa7.56□□□□□ -1.2
SHMT2-214ENST00000554604 LINC00846Q9NV44 126 aa7.56□□□□□ -1.2
SHMT2-214ENST00000554604 TNXBP22105 4242 aa7.56□□□□□ -1.2
SHMT2-214ENST00000554604 TRBV7-4A0A0J9YYF1 115 aa7.55□□□□□ -1.2
SHMT2-214ENST00000554604 KRTAP10-8P60410 259 aa7.54□□□□□ -1.2
SHMT2-214ENST00000554604 Q6JHZ5 121 aa7.54□□□□□ -1.2
SHMT2-214ENST00000554604 IGLV5-48A0A075B6I7 105 aa7.53□□□□□ -1.2
SHMT2-214ENST00000554604 LINC01547P58512 204 aaPredicted RBP7.53□□□□□ -1.2
SHMT2-214ENST00000554604 Q8N377 158 aa7.53□□□□□ -1.2
SHMT2-214ENST00000554604 H0Y9J4 135 aa7.52□□□□□ -1.21
SHMT2-214ENST00000554604 HMCN2Q8NDA2 5059 aa7.51□□□□□ -1.21
SHMT2-214ENST00000554604 ATP5EP2Q5VTU8 51 aa7.49□□□□□ -1.21
SHMT2-214ENST00000554604 FAM19A1Q7Z5A9 133 aa7.49□□□□□ -1.21
SHMT2-214ENST00000554604 DEFB105AQ8NG35 78 aa7.49□□□□□ -1.21
SHMT2-214ENST00000554604 UBL5Q9BZL1 73 aa7.49□□□□□ -1.21
SHMT2-214ENST00000554604 ERC2-IT1O76042 136 aa7.48□□□□□ -1.21
SHMT2-214ENST00000554604 PRR26Q8N8Z3 221 aa7.47□□□□□ -1.21
SHMT2-214ENST00000554604 ST20-AS1Q8NBB2 130 aa7.47□□□□□ -1.21
SHMT2-214ENST00000554604 ZNF861PO60384 105 aa7.46□□□□□ -1.22
SHMT2-214ENST00000554604 PRLHP81277 87 aa7.45□□□□□ -1.22
SHMT2-214ENST00000554604 IGKV3D-7A0A0C4DH55 119 aa7.44□□□□□ -1.22
SHMT2-214ENST00000554604 A0A1B0GW54 56 aa7.44□□□□□ -1.22
SHMT2-214ENST00000554604 BCE1O60756 84 aa7.44□□□□□ -1.22
SHMT2-214ENST00000554604 KRTAP1-4P0C5Y4 121 aa7.43□□□□□ -1.22
SHMT2-214ENST00000554604 Q6ZVQ6 151 aa7.43□□□□□ -1.22
SHMT2-214ENST00000554604 ANAPC13Q9BS18 74 aa7.43□□□□□ -1.22
SHMT2-214ENST00000554604 SPRR1BP22528 89 aa7.42□□□□□ -1.22
SHMT2-214ENST00000554604 SMIM29Q86T20 159 aa7.42□□□□□ -1.22
SHMT2-214ENST00000554604 C3orf22Q8N5N4 141 aa7.42□□□□□ -1.22
SHMT2-214ENST00000554604 HIGD2AQ9BW72 106 aa7.42□□□□□ -1.22
SHMT2-214ENST00000554604 FAM236AA0A1B0GUQ0 79 aa7.41□□□□□ -1.22
SHMT2-214ENST00000554604 FAM236BA0A1B0GV22 79 aa7.41□□□□□ -1.22
SHMT2-214ENST00000554604 KRTAP13-1Q8IUC0 172 aa7.41□□□□□ -1.22
SHMT2-214ENST00000554604 UBR4Q5T4S7 5183 aa7.41□□□□□ -1.22
SHMT2-214ENST00000554604 F8WEM9 126 aa7.4□□□□□ -1.22
SHMT2-214ENST00000554604 UBE2AP49459 152 aa7.4□□□□□ -1.22
SHMT2-214ENST00000554604 HIST1H4AP62805 103 aaKnown RBP7.4□□□□□ -1.22
SHMT2-214ENST00000554604 IGLV8-61A0A075B6I0 122 aa7.39□□□□□ -1.23
SHMT2-214ENST00000554604 CXCL6P80162 114 aa7.39□□□□□ -1.23
SHMT2-214ENST00000554604 Q8NBF4 154 aa7.38□□□□□ -1.23
SHMT2-214ENST00000554604 A0A1W2PNM2 257 aa7.37□□□□□ -1.23
SHMT2-214ENST00000554604 SPRR4Q96PI1 79 aa7.37□□□□□ -1.23
SHMT2-214ENST00000554604 LRP2P98164 4655 aa7.36□□□□□ -1.23
SHMT2-214ENST00000554604 ATOX1O00244 68 aa7.35□□□□□ -1.23
SHMT2-214ENST00000554604 CRYGAP11844 174 aa7.35□□□□□ -1.23
SHMT2-214ENST00000554604 NREPQ16612 68 aa7.34□□□□□ -1.23
SHMT2-214ENST00000554604 A0A087WVE0 104 aa7.33□□□□□ -1.24
SHMT2-214ENST00000554604 IGFL1Q6UW32 110 aa7.33□□□□□ -1.24
SHMT2-214ENST00000554604 TYMSOSQ8TAI1 123 aa7.33□□□□□ -1.24
SHMT2-214ENST00000554604 ANAPC11Q9NYG5 84 aa7.33□□□□□ -1.24
SHMT2-214ENST00000554604 A0A087X002 238 aa7.32□□□□□ -1.24
SHMT2-214ENST00000554604 PRR4Q16378 134 aa7.3□□□□□ -1.24
SHMT2-214ENST00000554604 ZNF706Q9Y5V0 76 aaPredicted RBP7.3□□□□□ -1.24
SHMT2-214ENST00000554604 FAM229BQ4G0N7 80 aa7.29□□□□□ -1.24
SHMT2-214ENST00000554604 LINC00483Q53H64 154 aa7.29□□□□□ -1.24
SHMT2-214ENST00000554604 BPY2O14599 106 aa7.28□□□□□ -1.24
SHMT2-214ENST00000554604 CCDC179H3BU77 68 aa7.26□□□□□ -1.25
SHMT2-214ENST00000554604 UQCRQO14949 82 aa7.26□□□□□ -1.25
SHMT2-214ENST00000554604 KRTAP13-2Q52LG2 175 aa7.26□□□□□ -1.25
SHMT2-214ENST00000554604 COX7CP15954 63 aa7.25□□□□□ -1.25
SHMT2-214ENST00000554604 SERP2Q8N6R1 65 aa7.25□□□□□ -1.25
SHMT2-214ENST00000554604 IGKV4-1P06312 121 aa7.24□□□□□ -1.25
SHMT2-214ENST00000554604 LINC00304Q8N9R0 145 aa7.24□□□□□ -1.25
SHMT2-214ENST00000554604 LPAP08519 4548 aa7.23□□□□□ -1.25
SHMT2-214ENST00000554604 A0A0G2JQZ4 141 aa7.23□□□□□ -1.25
SHMT2-214ENST00000554604 RNF213Q63HN8 5207 aa7.22□□□□□ -1.25
SHMT2-214ENST00000554604 SMIM20Q8N5G0 67 aa7.22□□□□□ -1.25
SHMT2-214ENST00000554604 A0A087WSZ3 146 aa7.21□□□□□ -1.26
SHMT2-214ENST00000554604 DSCR10P59022 87 aa7.19□□□□□ -1.26
SHMT2-214ENST00000554604 C9orf153Q5TBE3 101 aa7.19□□□□□ -1.26
SHMT2-214ENST00000554604 TRAV7A0A075B6U4 112 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms