RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 IGLV9-49A0A0B4J1Y8 123 aa7.19□□□□□ -1.26
SHMT2-209ENST00000553949 LST1O00453 97 aa7.19□□□□□ -1.26
SHMT2-209ENST00000553949 SMIM29Q86T20 159 aa7.19□□□□□ -1.26
SHMT2-209ENST00000553949 DNAL4O96015 105 aa7.18□□□□□ -1.26
SHMT2-209ENST00000553949 TRACP01848 142 aa7.18□□□□□ -1.26
SHMT2-209ENST00000553949 OCIAD2Q56VL3 154 aa7.18□□□□□ -1.26
SHMT2-209ENST00000553949 MOBPQ13875 183 aa7.17□□□□□ -1.26
SHMT2-209ENST00000553949 LYRM7Q5U5X0 104 aa7.17□□□□□ -1.26
SHMT2-209ENST00000553949 PPDPFLQ8WWR9 84 aa7.17□□□□□ -1.26
SHMT2-209ENST00000553949 TCL1BO95988 128 aa7.16□□□□□ -1.26
SHMT2-209ENST00000553949 ATXN8Q156A1 80 aa7.16□□□□□ -1.26
SHMT2-209ENST00000553949 C9orf153Q5TBE3 101 aa7.16□□□□□ -1.26
SHMT2-209ENST00000553949 HERC1Q15751 4861 aa7.15□□□□□ -1.26
SHMT2-209ENST00000553949 A0A1W2PPM0 123 aa7.15□□□□□ -1.26
SHMT2-209ENST00000553949 GHRHP01286 108 aa7.15□□□□□ -1.26
SHMT2-209ENST00000553949 Q8NBF4 154 aa7.15□□□□□ -1.26
SHMT2-209ENST00000553949 ORMDL1Q9P0S3 153 aa7.15□□□□□ -1.26
SHMT2-209ENST00000553949 DMBT1Q9UGM3 2413 aaPredicted RBP7.15□□□□□ -1.27
SHMT2-209ENST00000553949 SSBP3-AS1Q7Z2R9 100 aa7.14□□□□□ -1.27
SHMT2-209ENST00000553949 TRBV20-1A0A075B6N2 111 aa7.13□□□□□ -1.27
SHMT2-209ENST00000553949 F8WEM9 126 aa7.13□□□□□ -1.27
SHMT2-209ENST00000553949 FABP2P12104 132 aa7.13□□□□□ -1.27
SHMT2-209ENST00000553949 LINC00304Q8N9R0 145 aa7.13□□□□□ -1.27
SHMT2-209ENST00000553949 H3BQ85 93 aa7.12□□□□□ -1.27
SHMT2-209ENST00000553949 TMEM256-PLSCR3K7ERE1 68 aa7.11□□□□□ -1.27
SHMT2-209ENST00000553949 NDUFV3P56181 108 aaKnown RBP7.1□□□□□ -1.27
SHMT2-209ENST00000553949 IGLV8-61A0A075B6I0 122 aa7.09□□□□□ -1.27
SHMT2-209ENST00000553949 C4orf48Q5BLP8 95 aa7.09□□□□□ -1.27
SHMT2-209ENST00000553949 SPAG11AQ6PDA7 123 aa7.09□□□□□ -1.27
SHMT2-209ENST00000553949 SPCS1Q9Y6A9 102 aa7.09□□□□□ -1.27
SHMT2-209ENST00000553949 BAALC-AS2P0C853 105 aa7.08□□□□□ -1.28
SHMT2-209ENST00000553949 UBE2V1Q13404 147 aa7.07□□□□□ -1.28
SHMT2-209ENST00000553949 A0A0G2JQZ4 141 aa7.06□□□□□ -1.28
SHMT2-209ENST00000553949 C9JAW5 83 aa7.06□□□□□ -1.28
SHMT2-209ENST00000553949 H3BMG7 143 aa7.06□□□□□ -1.28
SHMT2-209ENST00000553949 SPINK1P00995 79 aa7.06□□□□□ -1.28
SHMT2-209ENST00000553949 Q6JHZ5 121 aa7.06□□□□□ -1.28
SHMT2-209ENST00000553949 IGFL1Q6UW32 110 aa7.05□□□□□ -1.28
SHMT2-209ENST00000553949 ANKRD29Q8N6D5 301 aa7.05□□□□□ -1.28
SHMT2-209ENST00000553949 K7EP34 96 aa7.04□□□□□ -1.28
SHMT2-209ENST00000553949 CD164Q04900 197 aa7.04□□□□□ -1.28
SHMT2-209ENST00000553949 HRCT1Q6UXD1 115 aa7.04□□□□□ -1.28
SHMT2-209ENST00000553949 A0A1B0GV72 72 aa7.03□□□□□ -1.28
SHMT2-209ENST00000553949 RPS29P62273 56 aaKnown RBP7.02□□□□□ -1.29
SHMT2-209ENST00000553949 HMCN2Q8NDA2 5059 aa7.02□□□□□ -1.29
SHMT2-209ENST00000553949 MTURNQ8N3F0 131 aa7.01□□□□□ -1.29
SHMT2-209ENST00000553949 H3BT86 120 aa7□□□□□ -1.29
SHMT2-209ENST00000553949 RBM3P98179 157 aaKnown RBP6.99□□□□□ -1.29
SHMT2-209ENST00000553949 GTF2H5Q6ZYL4 71 aa6.99□□□□□ -1.29
SHMT2-209ENST00000553949 LIMD2Q9BT23 127 aa6.98□□□□□ -1.29
SHMT2-209ENST00000553949 TRBV7-4A0A0J9YYF1 115 aa6.97□□□□□ -1.29
SHMT2-209ENST00000553949 TRBV7-7A0A0K0K1E9 115 aa6.97□□□□□ -1.29
SHMT2-209ENST00000553949 JMJD7-PLA2G4BH0Y9G9 81 aa6.97□□□□□ -1.29
SHMT2-209ENST00000553949 Q6Q795 121 aa6.97□□□□□ -1.29
SHMT2-209ENST00000553949 DSCR8Q96T75 97 aa6.97□□□□□ -1.29
SHMT2-209ENST00000553949 RETNLBQ9BQ08 111 aa6.97□□□□□ -1.29
SHMT2-209ENST00000553949 A0A1W2PNM2 257 aa6.96□□□□□ -1.3
SHMT2-209ENST00000553949 SMCPP49901 116 aaPredicted RBP6.96□□□□□ -1.3
SHMT2-209ENST00000553949 TEN1Q86WV5 123 aa6.96□□□□□ -1.3
SHMT2-209ENST00000553949 PRO0461Q9UI25 63 aa6.96□□□□□ -1.3
SHMT2-209ENST00000553949 Q5XG85 94 aa6.95□□□□□ -1.3
SHMT2-209ENST00000553949 OBSCN-AS1Q96MR7 158 aa6.95□□□□□ -1.3
SHMT2-209ENST00000553949 CCKP06307 115 aa6.94□□□□□ -1.3
SHMT2-209ENST00000553949 PRR4Q16378 134 aa6.93□□□□□ -1.3
SHMT2-209ENST00000553949 LOC110117498A0A087WWA1 95 aa6.92□□□□□ -1.3
SHMT2-209ENST00000553949 C14orf132Q9NPU4 83 aa6.92□□□□□ -1.3
SHMT2-209ENST00000553949 A0A087WSZ3 146 aa6.91□□□□□ -1.3
SHMT2-209ENST00000553949 F8W1H4 67 aa6.91□□□□□ -1.3
SHMT2-209ENST00000553949 Q6ZQT0 140 aa6.91□□□□□ -1.3
SHMT2-209ENST00000553949 VPS25Q9BRG1 176 aa6.91□□□□□ -1.3
SHMT2-209ENST00000553949 A0A1B0GV90 55 aa6.9□□□□□ -1.3
SHMT2-209ENST00000553949 PDE6GP18545 87 aa6.9□□□□□ -1.3
SHMT2-209ENST00000553949 FP248Q71RG6 208 aaPredicted RBP6.9□□□□□ -1.3
SHMT2-209ENST00000553949 ASB16-AS1Q495Z4 193 aa6.89□□□□□ -1.31
SHMT2-209ENST00000553949 SS18L2Q9UHA2 77 aa6.89□□□□□ -1.31
SHMT2-209ENST00000553949 IGLV7-46A0A075B6I9 117 aa6.88□□□□□ -1.31
SHMT2-209ENST00000553949 C1orf195Q5TG92 126 aa6.88□□□□□ -1.31
SHMT2-209ENST00000553949 LPAP08519 4548 aa6.86□□□□□ -1.31
SHMT2-209ENST00000553949 C21orf62-AS1Q17RA5 79 aa6.85□□□□□ -1.31
SHMT2-209ENST00000553949 A0A1B0GW54 56 aa6.84□□□□□ -1.31
SHMT2-209ENST00000553949 ETDBQ3ZM63 59 aa6.83□□□□□ -1.32
SHMT2-209ENST00000553949 LRP2P98164 4655 aa6.83□□□□□ -1.32
SHMT2-209ENST00000553949 Q96NJ1 140 aa6.82□□□□□ -1.32
SHMT2-209ENST00000553949 TPRXLQ17RH7 258 aa6.81□□□□□ -1.32
SHMT2-209ENST00000553949 LINC00472Q9H8W2 130 aa6.8□□□□□ -1.32
SHMT2-209ENST00000553949 KRTAP13-3Q3SY46 172 aa6.79□□□□□ -1.32
SHMT2-209ENST00000553949 DEFB116Q30KQ4 102 aa6.77□□□□□ -1.33
SHMT2-209ENST00000553949 IGKV4-1P06312 121 aa6.76□□□□□ -1.33
SHMT2-209ENST00000553949 CDIP1Q9H305 208 aa6.76□□□□□ -1.33
SHMT2-209ENST00000553949 SIGMAR1Q99720 223 aa6.75□□□□□ -1.33
SHMT2-209ENST00000553949 C9orf92A6NGG3 77 aa6.74□□□□□ -1.33
SHMT2-209ENST00000553949 NREPQ16612 68 aa6.74□□□□□ -1.33
SHMT2-209ENST00000553949 J3KT08 172 aa6.73□□□□□ -1.33
SHMT2-209ENST00000553949 UBR4Q5T4S7 5183 aa6.72□□□□□ -1.33
SHMT2-209ENST00000553949 LINC00846Q9NV44 126 aa6.71□□□□□ -1.34
SHMT2-209ENST00000553949 XP32Q5T750 250 aa6.7□□□□□ -1.34
SHMT2-209ENST00000553949 Q6ZVQ6 151 aa6.7□□□□□ -1.34
SHMT2-209ENST00000553949 UBL5Q9BZL1 73 aa6.68□□□□□ -1.34
SHMT2-209ENST00000553949 A8MWP4 228 aa6.67□□□□□ -1.34
SHMT2-209ENST00000553949 MUC17Q685J3 4493 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms