RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 COX6CP09669 75 aa10.79□□□□□ -0.68
DDX54-209ENST00000551912 A0A1B0GX51 115 aa10.78□□□□□ -0.68
DDX54-209ENST00000551912 SPINK1P00995 79 aa10.76□□□□□ -0.69
DDX54-209ENST00000551912 PPDPFLQ8WWR9 84 aa10.76□□□□□ -0.69
DDX54-209ENST00000551912 OCIAD2Q56VL3 154 aa10.75□□□□□ -0.69
DDX54-209ENST00000551912 CLEC2BQ92478 149 aa10.75□□□□□ -0.69
DDX54-209ENST00000551912 F8WEM9 126 aa10.73□□□□□ -0.69
DDX54-209ENST00000551912 SCGB1C2P0DMR2 95 aa10.72□□□□□ -0.69
DDX54-209ENST00000551912 BATFQ16520 125 aa10.71□□□□□ -0.69
DDX54-209ENST00000551912 SNHG12Q9BXW3 62 aa10.71□□□□□ -0.69
DDX54-209ENST00000551912 DNAL4O96015 105 aa10.7□□□□□ -0.7
DDX54-209ENST00000551912 GHRHP01286 108 aa10.7□□□□□ -0.7
DDX54-209ENST00000551912 PRR4Q16378 134 aa10.7□□□□□ -0.7
DDX54-209ENST00000551912 RPS29P62273 56 aaKnown RBP10.69□□□□□ -0.7
DDX54-209ENST00000551912 RETNLBQ9BQ08 111 aa10.68□□□□□ -0.7
DDX54-209ENST00000551912 HRCT1Q6UXD1 115 aa10.66□□□□□ -0.7
DDX54-209ENST00000551912 IGLV8-61A0A075B6I0 122 aa10.65□□□□□ -0.7
DDX54-209ENST00000551912 CD164Q04900 197 aa10.65□□□□□ -0.7
DDX54-209ENST00000551912 LST1O00453 97 aa10.64□□□□□ -0.71
DDX54-209ENST00000551912 Q6JHZ5 121 aa10.64□□□□□ -0.71
DDX54-209ENST00000551912 NAA38Q9BRA0 125 aaKnown RBP10.64□□□□□ -0.71
DDX54-209ENST00000551912 ORMDL1Q9P0S3 153 aa10.64□□□□□ -0.71
DDX54-209ENST00000551912 A0A0G2JQZ4 141 aa10.63□□□□□ -0.71
DDX54-209ENST00000551912 TRACP01848 142 aa10.63□□□□□ -0.71
DDX54-209ENST00000551912 FABP2P12104 132 aa10.63□□□□□ -0.71
DDX54-209ENST00000551912 NDUFV3P56181 108 aaKnown RBP10.63□□□□□ -0.71
DDX54-209ENST00000551912 H3BQ85 93 aa10.62□□□□□ -0.71
DDX54-209ENST00000551912 LIMD2Q9BT23 127 aa10.61□□□□□ -0.71
DDX54-209ENST00000551912 LRP2P98164 4655 aa10.6□□□□□ -0.71
DDX54-209ENST00000551912 H3BUT2 72 aa10.59□□□□□ -0.71
DDX54-209ENST00000551912 IGFL1Q6UW32 110 aa10.59□□□□□ -0.71
DDX54-209ENST00000551912 TMEM256-PLSCR3K7ERE1 68 aa10.58□□□□□ -0.72
DDX54-209ENST00000551912 LYRM7Q5U5X0 104 aa10.58□□□□□ -0.72
DDX54-209ENST00000551912 ATXN8Q156A1 80 aa10.57□□□□□ -0.72
DDX54-209ENST00000551912 FP248Q71RG6 208 aaPredicted RBP10.57□□□□□ -0.72
DDX54-209ENST00000551912 LPAP08519 4548 aa10.56□□□□□ -0.72
DDX54-209ENST00000551912 IGLV7-46A0A075B6I9 117 aa10.56□□□□□ -0.72
DDX54-209ENST00000551912 H3BMG7 143 aa10.56□□□□□ -0.72
DDX54-209ENST00000551912 TCL1BO95988 128 aa10.56□□□□□ -0.72
DDX54-209ENST00000551912 C9orf118A6NHY6 69 aa10.55□□□□□ -0.72
DDX54-209ENST00000551912 TAX1BP3O14907 124 aa10.55□□□□□ -0.72
DDX54-209ENST00000551912 Q5XG85 94 aa10.53□□□□□ -0.72
DDX54-209ENST00000551912 UBE2V1Q13404 147 aa10.52□□□□□ -0.73
DDX54-209ENST00000551912 TRBV20-1A0A075B6N2 111 aa10.51□□□□□ -0.73
DDX54-209ENST00000551912 TRBV7-7A0A0K0K1E9 115 aa10.5□□□□□ -0.73
DDX54-209ENST00000551912 PCP4L1A6NKN8 68 aa10.5□□□□□ -0.73
DDX54-209ENST00000551912 BAALC-AS2P0C853 105 aa10.5□□□□□ -0.73
DDX54-209ENST00000551912 A0A1B0GV72 72 aa10.48□□□□□ -0.73
DDX54-209ENST00000551912 A0A1W2PPM0 123 aa10.48□□□□□ -0.73
DDX54-209ENST00000551912 TPRXLQ17RH7 258 aa10.48□□□□□ -0.73
DDX54-209ENST00000551912 COL5A1-AS1Q5SY13 56 aa10.48□□□□□ -0.73
DDX54-209ENST00000551912 Q6Q795 121 aa10.47□□□□□ -0.73
DDX54-209ENST00000551912 ANKRD29Q8N6D5 301 aa10.47□□□□□ -0.73
DDX54-209ENST00000551912 UBR4Q5T4S7 5183 aa10.47□□□□□ -0.73
DDX54-209ENST00000551912 TEN1Q86WV5 123 aa10.46□□□□□ -0.73
DDX54-209ENST00000551912 C1orf195Q5TG92 126 aa10.43□□□□□ -0.74
DDX54-209ENST00000551912 C9JAW5 83 aa10.42□□□□□ -0.74
DDX54-209ENST00000551912 CDIP1Q9H305 208 aa10.42□□□□□ -0.74
DDX54-209ENST00000551912 RBM3P98179 157 aaKnown RBP10.41□□□□□ -0.74
DDX54-209ENST00000551912 ASB16-AS1Q495Z4 193 aa10.41□□□□□ -0.74
DDX54-209ENST00000551912 A0A1W2PNM2 257 aa10.4□□□□□ -0.74
DDX54-209ENST00000551912 KRTAP13-3Q3SY46 172 aa10.4□□□□□ -0.74
DDX54-209ENST00000551912 DSCR8Q96T75 97 aa10.39□□□□□ -0.75
DDX54-209ENST00000551912 SS18L2Q9UHA2 77 aa10.39□□□□□ -0.75
DDX54-209ENST00000551912 TRBV7-4A0A0J9YYF1 115 aa10.38□□□□□ -0.75
DDX54-209ENST00000551912 A0A087WSZ3 146 aa10.37□□□□□ -0.75
DDX54-209ENST00000551912 SPCS1Q9Y6A9 102 aa10.37□□□□□ -0.75
DDX54-209ENST00000551912 JMJD7-PLA2G4BH0Y9G9 81 aa10.36□□□□□ -0.75
DDX54-209ENST00000551912 CCKP06307 115 aa10.36□□□□□ -0.75
DDX54-209ENST00000551912 H3BT86 120 aa10.33□□□□□ -0.76
DDX54-209ENST00000551912 VPS25Q9BRG1 176 aa10.32□□□□□ -0.76
DDX54-209ENST00000551912 MTURNQ8N3F0 131 aa10.31□□□□□ -0.76
DDX54-209ENST00000551912 OBSCN-AS1Q96MR7 158 aa10.28□□□□□ -0.76
DDX54-209ENST00000551912 LOC110117498A0A087WWA1 95 aa10.27□□□□□ -0.77
DDX54-209ENST00000551912 C9orf92A6NGG3 77 aa10.27□□□□□ -0.77
DDX54-209ENST00000551912 K7EP34 96 aa10.27□□□□□ -0.77
DDX54-209ENST00000551912 PDE6GP18545 87 aa10.27□□□□□ -0.77
DDX54-209ENST00000551912 Q6ZQT0 140 aa10.26□□□□□ -0.77
DDX54-209ENST00000551912 C14orf132Q9NPU4 83 aa10.26□□□□□ -0.77
DDX54-209ENST00000551912 XP32Q5T750 250 aa10.24□□□□□ -0.77
DDX54-209ENST00000551912 Q96NJ1 140 aa10.24□□□□□ -0.77
DDX54-209ENST00000551912 C21orf62-AS1Q17RA5 79 aa10.23□□□□□ -0.77
DDX54-209ENST00000551912 RNF213Q63HN8 5207 aa10.22□□□□□ -0.77
DDX54-209ENST00000551912 GTF2H5Q6ZYL4 71 aa10.21□□□□□ -0.77
DDX54-209ENST00000551912 MUC17Q685J3 4493 aa10.19□□□□□ -0.78
DDX54-209ENST00000551912 A0A1B0GW54 56 aa10.19□□□□□ -0.78
DDX54-209ENST00000551912 SMCPP49901 116 aaPredicted RBP10.19□□□□□ -0.78
DDX54-209ENST00000551912 LINC00472Q9H8W2 130 aa10.18□□□□□ -0.78
DDX54-209ENST00000551912 PRO0461Q9UI25 63 aa10.18□□□□□ -0.78
DDX54-209ENST00000551912 SIGMAR1Q99720 223 aa10.17□□□□□ -0.78
DDX54-209ENST00000551912 IGKV4-1P06312 121 aa10.16□□□□□ -0.78
DDX54-209ENST00000551912 SEC61BP60468 96 aaKnown RBP10.15□□□□□ -0.78
DDX54-209ENST00000551912 DEFB116Q30KQ4 102 aa10.14□□□□□ -0.79
DDX54-209ENST00000551912 F8W1H4 67 aa10.1□□□□□ -0.79
DDX54-209ENST00000551912 J3KT08 172 aa10.08□□□□□ -0.8
DDX54-209ENST00000551912 MUC2Q02817 5179 aa10.08□□□□□ -0.8
DDX54-209ENST00000551912 RPL37P61927 97 aaKnown RBP10.06□□□□□ -0.8
DDX54-209ENST00000551912 NREPQ16612 68 aa10.05□□□□□ -0.8
DDX54-209ENST00000551912 DSCR10P59022 87 aa10.04□□□□□ -0.8
DDX54-209ENST00000551912 LINC00313P59037 77 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms