RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 NISCHQ9Y2I1 1504 aa44.76■■■■■ 4.76
DDX54-209ENST00000551912 CCDC180Q9P1Z9 1646 aa39.65■■■■□ 3.94
DDX54-209ENST00000551912 ABCC9O60706 1549 aa38.56■■■■□ 3.76
DDX54-209ENST00000551912 ZCCHC6Q5VYS8 1495 aaKnown RBP37.35■■■■□ 3.57
DDX54-209ENST00000551912 DCAF8L2P0C7V8 631 aa37.33■■■■□ 3.57
DDX54-209ENST00000551912 NACADO15069 1562 aa37.24■■■■□ 3.55
DDX54-209ENST00000551912 RB1CC1Q8TDY2 1594 aa37.21■■■■□ 3.55
DDX54-209ENST00000551912 MYO15BQ96JP2 1530 aa37.1■■■■□ 3.53
DDX54-209ENST00000551912 DCAF1Q9Y4B6 1507 aa37.05■■■■□ 3.52
DDX54-209ENST00000551912 UNC13AQ9UPW8 1703 aa36.34■■■■□ 3.41
DDX54-209ENST00000551912 SCRIBQ14160 1630 aa36.23■■■■□ 3.39
DDX54-209ENST00000551912 PABPN1Q86U42 306 aaKnown RBP eCLIP36.09■■■■□ 3.37
DDX54-209ENST00000551912 BICRAQ9NZM4 1560 aa36.05■■■■□ 3.36
DDX54-209ENST00000551912 SHROOM4Q9ULL8 1493 aa35.73■■■■□ 3.31
DDX54-209ENST00000551912 DNAJC5BQ9UF47 199 aa35.11■■■■□ 3.21
DDX54-209ENST00000551912 EIF4G1Q04637 1599 aaKnown RBP35.1■■■■□ 3.21
DDX54-209ENST00000551912 CC2D2AQ9P2K1 1620 aa34.88■■■■□ 3.17
DDX54-209ENST00000551912 CECR2Q9BXF3 1484 aa34.84■■■■□ 3.17
DDX54-209ENST00000551912 BAZ1AQ9NRL2 1556 aaPredicted RBP34.69■■■■□ 3.14
DDX54-209ENST00000551912 SMARCA4P51532 1647 aa34.67■■■■□ 3.14
DDX54-209ENST00000551912 MROH2BQ7Z745 1585 aa34.5■■■■□ 3.11
DDX54-209ENST00000551912 ATAD2BQ9ULI0 1458 aa34.42■■■■□ 3.1
DDX54-209ENST00000551912 SMARCA2P51531 1590 aa34.4■■■■□ 3.1
DDX54-209ENST00000551912 NCAPD3P42695 1498 aa34.36■■■■□ 3.09
DDX54-209ENST00000551912 PEG3Q9GZU2 1588 aa34.32■■■■□ 3.09
DDX54-209ENST00000551912 RSF1Q96T23 1441 aaPredicted RBP34.22■■■■□ 3.07
DDX54-209ENST00000551912 HMGXB3Q12766 1538 aa34.21■■■■□ 3.07
DDX54-209ENST00000551912 BAZ1BQ9UIG0 1483 aaKnown RBP34.17■■■■□ 3.06
DDX54-209ENST00000551912 WIZO95785 1651 aa34.14■■■■□ 3.06
DDX54-209ENST00000551912 TOP2AP11388 1531 aaKnown RBP33.8■■■■□ 3
DDX54-209ENST00000551912 SUPT5HO00267 1087 aaKnown RBP33.6■■■□□ 2.97
DDX54-209ENST00000551912 NESP48681 1621 aa33.44■■■□□ 2.94
DDX54-209ENST00000551912 CCDC88BA6NC98 1476 aa33.41■■■□□ 2.94
DDX54-209ENST00000551912 LAMC3Q9Y6N6 1575 aa33.41■■■□□ 2.94
DDX54-209ENST00000551912 CADPSQ9ULU8 1353 aa33.39■■■□□ 2.94
DDX54-209ENST00000551912 CFTRP13569 1480 aa33.24■■■□□ 2.91
DDX54-209ENST00000551912 ERCC6Q03468 1493 aa33.23■■■□□ 2.91
DDX54-209ENST00000551912 PDS5BQ9NTI5 1447 aa33.19■■■□□ 2.9
DDX54-209ENST00000551912 KIF21AQ7Z4S6 1674 aa33.04■■■□□ 2.88
DDX54-209ENST00000551912 FANCD2Q9BXW9 1451 aa33■■■□□ 2.87
DDX54-209ENST00000551912 PRDM2Q13029 1718 aa32.98■■■□□ 2.87
DDX54-209ENST00000551912 CEP164Q9UPV0 1460 aa32.93■■■□□ 2.86
DDX54-209ENST00000551912 THOC2Q8NI27 1593 aaKnown RBP32.86■■■□□ 2.85
DDX54-209ENST00000551912 MRC2Q9UBG0 1479 aa32.82■■■□□ 2.84
DDX54-209ENST00000551912 CUX2O14529 1486 aa32.76■■■□□ 2.84
DDX54-209ENST00000551912 WDR62O43379 1518 aa32.69■■■□□ 2.82
DDX54-209ENST00000551912 URB2Q14146 1524 aaKnown RBP32.64■■■□□ 2.82
DDX54-209ENST00000551912 ABCC8Q09428 1581 aa32.53■■■□□ 2.8
DDX54-209ENST00000551912 TOPBP1Q92547 1522 aa32.5■■■□□ 2.79
DDX54-209ENST00000551912 DNMBPQ6XZF7 1577 aa32.49■■■□□ 2.79
DDX54-209ENST00000551912 CUX1P39880 1505 aa32.36■■■□□ 2.77
DDX54-209ENST00000551912 WRNQ14191 1432 aaPredicted RBP eCLIP32.27■■■□□ 2.76
DDX54-209ENST00000551912 POLA1P09884 1462 aaPredicted RBP32.24■■■□□ 2.75
DDX54-209ENST00000551912 IFT140Q96RY7 1462 aa32.23■■■□□ 2.75
DDX54-209ENST00000551912 FGD5Q6ZNL6 1462 aa32.21■■■□□ 2.75
DDX54-209ENST00000551912 SYNJ1O43426 1573 aa32.15■■■□□ 2.74
DDX54-209ENST00000551912 TOP2BQ02880 1626 aa32.15■■■□□ 2.74
DDX54-209ENST00000551912 BIVM-ERCC5R4GMW8 1640 aa32.14■■■□□ 2.74
DDX54-209ENST00000551912 SOGA1O94964 1423 aa32.13■■■□□ 2.73
DDX54-209ENST00000551912 TARBP1Q13395 1621 aaKnown RBP32.11■■■□□ 2.73
DDX54-209ENST00000551912 RAD54L2Q9Y4B4 1467 aa32.1■■■□□ 2.73
DDX54-209ENST00000551912 ZNF608Q9ULD9 1512 aaPredicted RBP32.05■■■□□ 2.72
DDX54-209ENST00000551912 EIF4G3O43432 1585 aaKnown RBP31.93■■■□□ 2.7
DDX54-209ENST00000551912 AQRO60306 1485 aaKnown RBP eCLIP31.91■■■□□ 2.7
DDX54-209ENST00000551912 ABCA10Q8WWZ4 1543 aa31.91■■■□□ 2.7
DDX54-209ENST00000551912 TDRD9Q8NDG6 1382 aaKnown RBP31.91■■■□□ 2.7
DDX54-209ENST00000551912 WDR97A6NE52 1622 aa31.89■■■□□ 2.7
DDX54-209ENST00000551912 GAPVD1Q14C86 1478 aa31.77■■■□□ 2.68
DDX54-209ENST00000551912 ABCA5Q8WWZ7 1642 aa31.74■■■□□ 2.67
DDX54-209ENST00000551912 TRIM41Q8WV44 630 aa31.73■■■□□ 2.67
DDX54-209ENST00000551912 GRIN2BQ13224 1484 aa31.72■■■□□ 2.67
DDX54-209ENST00000551912 PBRM1Q86U86 1689 aa31.64■■■□□ 2.66
DDX54-209ENST00000551912 SNAPC4Q5SXM2 1469 aa31.63■■■□□ 2.65
DDX54-209ENST00000551912 MAGI1Q96QZ7 1491 aaPredicted RBP31.6■■■□□ 2.65
DDX54-209ENST00000551912 KIF27Q86VH2 1401 aa31.58■■■□□ 2.65
DDX54-209ENST00000551912 ERICH3Q5RHP9 1530 aa31.54■■■□□ 2.64
DDX54-209ENST00000551912 CHIC1Q5VXU3 224 aa31.51■■■□□ 2.63
DDX54-209ENST00000551912 FBLN2P98095 1184 aa31.5■■■□□ 2.63
DDX54-209ENST00000551912 OSCARQ8IYS5 282 aa31.48■■■□□ 2.63
DDX54-209ENST00000551912 SYNJ2O15056 1496 aa31.47■■■□□ 2.63
DDX54-209ENST00000551912 CHMP7Q8WUX9 453 aaPredicted RBP31.46■■■□□ 2.63
DDX54-209ENST00000551912 CHD1O14646 1710 aa31.46■■■□□ 2.63
DDX54-209ENST00000551912 ADAMTS12P58397 1594 aa31.43■■■□□ 2.62
DDX54-209ENST00000551912 DNAJC5Q9H3Z4 198 aa31.42■■■□□ 2.62
DDX54-209ENST00000551912 IGF1RP08069 1367 aa31.41■■■□□ 2.62
DDX54-209ENST00000551912 FHAD1B1AJZ9 1412 aa31.41■■■□□ 2.62
DDX54-209ENST00000551912 RUSC2Q8N2Y8 1516 aa31.35■■■□□ 2.61
DDX54-209ENST00000551912 GRIN2AQ12879 1464 aa31.31■■■□□ 2.6
DDX54-209ENST00000551912 CUL7Q14999 1698 aa31.3■■■□□ 2.6
DDX54-209ENST00000551912 CARMIL1Q5VZK9 1371 aa31.24■■■□□ 2.59
DDX54-209ENST00000551912 EEA1Q15075 1411 aa31.17■■■□□ 2.58
DDX54-209ENST00000551912 NUP160Q12769 1436 aa31.15■■■□□ 2.58
DDX54-209ENST00000551912 CLASP1Q7Z460 1538 aa31.14■■■□□ 2.57
DDX54-209ENST00000551912 CEP170Q5SW79 1584 aa31.12■■■□□ 2.57
DDX54-209ENST00000551912 CSRNP3Q8WYN3 585 aa31.09■■■□□ 2.57
DDX54-209ENST00000551912 RAPGEF2Q9Y4G8 1499 aa31.08■■■□□ 2.57
DDX54-209ENST00000551912 FAM9AQ8IZU1 332 aaPredicted RBP31.05■■■□□ 2.56
DDX54-209ENST00000551912 PRXQ9BXM0 1461 aa31.03■■■□□ 2.56
DDX54-209ENST00000551912 ARHGEF11O15085 1522 aa30.94■■■□□ 2.54
DDX54-209ENST00000551912 KIAA0586Q9BVV6 1533 aa30.93■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms