RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 C1orf137Q5JT78 98 aa12.05□□□□□ -0.48
SSH1-209ENST00000551165 A0A0G2JQZ4 141 aa12.05□□□□□ -0.48
SSH1-209ENST00000551165 Q6ZSA8 131 aa12.05□□□□□ -0.48
SSH1-209ENST00000551165 PDE6GP18545 87 aa12.03□□□□□ -0.48
SSH1-209ENST00000551165 LINC00643Q86TS7 51 aa12.03□□□□□ -0.48
SSH1-209ENST00000551165 LRP1BQ9NZR2 4599 aa12.03□□□□□ -0.48
SSH1-209ENST00000551165 IGKV3D-7A0A0C4DH55 119 aa11.98□□□□□ -0.49
SSH1-209ENST00000551165 A0A1W2PNM2 257 aa11.98□□□□□ -0.49
SSH1-209ENST00000551165 SPRR1BP22528 89 aa11.97□□□□□ -0.49
SSH1-209ENST00000551165 ZNF861PO60384 105 aa11.95□□□□□ -0.5
SSH1-209ENST00000551165 F8WEM9 126 aa11.94□□□□□ -0.5
SSH1-209ENST00000551165 TRBV7-7A0A0K0K1E9 115 aa11.93□□□□□ -0.5
SSH1-209ENST00000551165 IGFL1Q6UW32 110 aa11.93□□□□□ -0.5
SSH1-209ENST00000551165 Q6ZVQ6 151 aa11.93□□□□□ -0.5
SSH1-209ENST00000551165 UBL5Q9BZL1 73 aa11.93□□□□□ -0.5
SSH1-209ENST00000551165 LINC00336Q6ZUF6 198 aa11.93□□□□□ -0.5
SSH1-209ENST00000551165 SPRR4Q96PI1 79 aa11.93□□□□□ -0.5
SSH1-209ENST00000551165 ANAPC11Q9NYG5 84 aa11.93□□□□□ -0.5
SSH1-209ENST00000551165 A0A1B0GVY2 172 aa11.92□□□□□ -0.5
SSH1-209ENST00000551165 IGLV7-43P04211 117 aa11.92□□□□□ -0.5
SSH1-209ENST00000551165 Q6JHZ5 121 aa11.92□□□□□ -0.5
SSH1-209ENST00000551165 DYNC1H1Q14204 4646 aaKnown RBP11.91□□□□□ -0.5
SSH1-209ENST00000551165 IGLV8-61A0A075B6I0 122 aa11.9□□□□□ -0.51
SSH1-209ENST00000551165 Q8NBF4 154 aa11.9□□□□□ -0.51
SSH1-209ENST00000551165 SCGB1A1P11684 91 aa11.89□□□□□ -0.51
SSH1-209ENST00000551165 Q6Q795 121 aa11.88□□□□□ -0.51
SSH1-209ENST00000551165 LINC00483Q53H64 154 aa11.85□□□□□ -0.51
SSH1-209ENST00000551165 VPS13BQ7Z7G8 4022 aa11.85□□□□□ -0.51
SSH1-209ENST00000551165 IGLV9-49A0A0B4J1Y8 123 aa11.85□□□□□ -0.51
SSH1-209ENST00000551165 A0A087WVE0 104 aa11.84□□□□□ -0.51
SSH1-209ENST00000551165 RYR3Q15413 4870 aa11.83□□□□□ -0.51
SSH1-209ENST00000551165 IMUPQ9GZP8 106 aa11.83□□□□□ -0.52
SSH1-209ENST00000551165 CRYGAP11844 174 aa11.82□□□□□ -0.52
SSH1-209ENST00000551165 NREPQ16612 68 aa11.81□□□□□ -0.52
SSH1-209ENST00000551165 ZNF706Q9Y5V0 76 aaPredicted RBP11.81□□□□□ -0.52
SSH1-209ENST00000551165 HIST1H4AP62805 103 aaKnown RBP11.79□□□□□ -0.52
SSH1-209ENST00000551165 C9orf153Q5TBE3 101 aa11.79□□□□□ -0.52
SSH1-209ENST00000551165 FAM236AA0A1B0GUQ0 79 aa11.78□□□□□ -0.52
SSH1-209ENST00000551165 FAM236BA0A1B0GV22 79 aa11.78□□□□□ -0.52
SSH1-209ENST00000551165 ATP5EP2Q5VTU8 51 aa11.78□□□□□ -0.52
SSH1-209ENST00000551165 A0A087WSZ3 146 aa11.76□□□□□ -0.53
SSH1-209ENST00000551165 APOBP04114 4563 aaKnown RBP11.76□□□□□ -0.53
SSH1-209ENST00000551165 MOBPQ13875 183 aa11.75□□□□□ -0.53
SSH1-209ENST00000551165 A0A1B0GW54 56 aa11.74□□□□□ -0.53
SSH1-209ENST00000551165 SMR3BP02814 79 aaPredicted RBP11.74□□□□□ -0.53
SSH1-209ENST00000551165 Q8N9L7 120 aa11.74□□□□□ -0.53
SSH1-209ENST00000551165 CXCL6P80162 114 aa11.73□□□□□ -0.53
SSH1-209ENST00000551165 HRCT1Q6UXD1 115 aa11.71□□□□□ -0.54
SSH1-209ENST00000551165 DEFB116Q30KQ4 102 aa11.7□□□□□ -0.54
SSH1-209ENST00000551165 BPY2O14599 106 aa11.69□□□□□ -0.54
SSH1-209ENST00000551165 FAT1Q14517 4588 aa11.68□□□□□ -0.54
SSH1-209ENST00000551165 ANAPC13Q9BS18 74 aa11.67□□□□□ -0.54
SSH1-209ENST00000551165 A0A087X002 238 aa11.66□□□□□ -0.54
SSH1-209ENST00000551165 RPL37AP61513 92 aaKnown RBP11.64□□□□□ -0.55
SSH1-209ENST00000551165 IGKV4-1P06312 121 aa11.63□□□□□ -0.55
SSH1-209ENST00000551165 DSCR10P59022 87 aa11.63□□□□□ -0.55
SSH1-209ENST00000551165 KRTAP1-4P0C5Y4 121 aa11.63□□□□□ -0.55
SSH1-209ENST00000551165 KRTAP13-2Q52LG2 175 aa11.61□□□□□ -0.55
SSH1-209ENST00000551165 K7EQZ3 153 aa11.57□□□□□ -0.56
SSH1-209ENST00000551165 LINC00472Q9H8W2 130 aa11.57□□□□□ -0.56
SSH1-209ENST00000551165 KRTAP10-4P60372 401 aaPredicted RBP11.56□□□□□ -0.56
SSH1-209ENST00000551165 SS18L2Q9UHA2 77 aa11.56□□□□□ -0.56
SSH1-209ENST00000551165 Q96NJ1 140 aa11.53□□□□□ -0.56
SSH1-209ENST00000551165 ATOX1O00244 68 aa11.52□□□□□ -0.57
SSH1-209ENST00000551165 PLA2G1BP04054 148 aaKnown RBP11.52□□□□□ -0.57
SSH1-209ENST00000551165 CCDC179H3BU77 68 aa11.52□□□□□ -0.57
SSH1-209ENST00000551165 FAM229BQ4G0N7 80 aa11.52□□□□□ -0.57
SSH1-209ENST00000551165 SSBP3-AS1Q7Z2R9 100 aa11.52□□□□□ -0.57
SSH1-209ENST00000551165 SPINK6Q6UWN8 80 aa11.51□□□□□ -0.57
SSH1-209ENST00000551165 HSPG2P98160 4391 aa11.46□□□□□ -0.57
SSH1-209ENST00000551165 SMIM20Q8N5G0 67 aa11.46□□□□□ -0.57
SSH1-209ENST00000551165 C5orf47Q569G3 176 aa11.46□□□□□ -0.58
SSH1-209ENST00000551165 PRR26Q8N8Z3 221 aa11.43□□□□□ -0.58
SSH1-209ENST00000551165 EPPK1P58107 5090 aaKnown RBP11.42□□□□□ -0.58
SSH1-209ENST00000551165 CD164Q04900 197 aa11.42□□□□□ -0.58
SSH1-209ENST00000551165 A8MWP4 228 aa11.41□□□□□ -0.58
SSH1-209ENST00000551165 SERP2Q8N6R1 65 aa11.41□□□□□ -0.58
SSH1-209ENST00000551165 COX7CP15954 63 aa11.4□□□□□ -0.58
SSH1-209ENST00000551165 PRR15Q8IV56 129 aa11.4□□□□□ -0.58
SSH1-209ENST00000551165 TYMSOSQ8TAI1 123 aa11.4□□□□□ -0.58
SSH1-209ENST00000551165 KRTAP17-1Q9BYP8 105 aa11.4□□□□□ -0.58
SSH1-209ENST00000551165 RYR1P21817 5038 aa11.38□□□□□ -0.59
SSH1-209ENST00000551165 WFDC13Q8IUB5 93 aa11.38□□□□□ -0.59
SSH1-209ENST00000551165 HCG22E2RYF7 251 aa11.37□□□□□ -0.59
SSH1-209ENST00000551165 KIAA1109Q2LD37 5005 aa11.37□□□□□ -0.59
SSH1-209ENST00000551165 J3KT08 172 aa11.36□□□□□ -0.59
SSH1-209ENST00000551165 UQCRQO14949 82 aa11.35□□□□□ -0.59
SSH1-209ENST00000551165 CDK2AP2O75956 126 aa11.33□□□□□ -0.6
SSH1-209ENST00000551165 TRAV7A0A075B6U4 112 aa11.33□□□□□ -0.6
SSH1-209ENST00000551165 OCR1Q9BZK8 76 aa11.32□□□□□ -0.6
SSH1-209ENST00000551165 KRTAP29-1A8MX34 341 aaPredicted RBP11.31□□□□□ -0.6
SSH1-209ENST00000551165 FAM229AH3BQW9 127 aa11.31□□□□□ -0.6
SSH1-209ENST00000551165 CYSTM1Q9H1C7 97 aa11.31□□□□□ -0.6
SSH1-209ENST00000551165 Q5VSD8 79 aa11.31□□□□□ -0.6
SSH1-209ENST00000551165 IGHV6-1A0A0B4J1U7 121 aa11.3□□□□□ -0.6
SSH1-209ENST00000551165 MMP24-AS1A0A0U1RRL7 71 aa11.3□□□□□ -0.6
SSH1-209ENST00000551165 NDUFB1O75438 58 aa11.3□□□□□ -0.6
SSH1-209ENST00000551165 NOTCH2NLQ7Z3S9 236 aa11.3□□□□□ -0.6
SSH1-209ENST00000551165 PKHD1L1Q86WI1 4243 aa11.29□□□□□ -0.6
SSH1-209ENST00000551165 ASB16-AS1Q495Z4 193 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms