RNA–Protein interactions for RNA: ENST00000550309.1

AL355112.1-201, humanhuman

TSL 1 (best) BASIC

Gene AL355112.1, Length 1,236 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355112.1-201ENST00000550309 IGKV2-40A0A087WW87 121 aaPredicted RBP2.94□□□□□ -1.94
AL355112.1-201ENST00000550309 TRBV27A0A0K0K1C4 114 aa2.94□□□□□ -1.94
AL355112.1-201ENST00000550309 NDUFC1O43677 76 aa2.94□□□□□ -1.94
AL355112.1-201ENST00000550309 IGKV2D-40P01614 121 aaPredicted RBP2.94□□□□□ -1.94
AL355112.1-201ENST00000550309 FUSP35637 526 aaKnown RBP eCLIP2.94□□□□□ -1.94
AL355112.1-201ENST00000550309 ZNF56Q15929 161 aa2.94□□□□□ -1.94
AL355112.1-201ENST00000550309 Q6ZQT0 140 aa2.94□□□□□ -1.94
AL355112.1-201ENST00000550309 PHF5AQ7RTV0 110 aaKnown RBP2.94□□□□□ -1.94
AL355112.1-201ENST00000550309 HUWE1Q7Z6Z7 4374 aaKnown RBP2.93□□□□□ -1.94
AL355112.1-201ENST00000550309 TGP01266 2768 aa2.93□□□□□ -1.94
AL355112.1-201ENST00000550309 IGKV3-7A0A075B6H7 116 aa2.93□□□□□ -1.94
AL355112.1-201ENST00000550309 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.93□□□□□ -1.94
AL355112.1-201ENST00000550309 IBA57-AS1B1ANH7 110 aa2.93□□□□□ -1.94
AL355112.1-201ENST00000550309 H3BVH4 76 aa2.93□□□□□ -1.94
AL355112.1-201ENST00000550309 Q6ZTI0 123 aa2.93□□□□□ -1.94
AL355112.1-201ENST00000550309 RHPN1-AS1Q9BWJ2 59 aa2.93□□□□□ -1.94
AL355112.1-201ENST00000550309 WFDC10AQ9H1F0 79 aa2.93□□□□□ -1.94
AL355112.1-201ENST00000550309 TEX49A0A1B0GTD5 131 aa2.92□□□□□ -1.94
AL355112.1-201ENST00000550309 NUPR2A6NF83 97 aa2.92□□□□□ -1.94
AL355112.1-201ENST00000550309 IGIPA6NJ69 53 aa2.92□□□□□ -1.94
AL355112.1-201ENST00000550309 PPP1R17O96001 155 aa2.92□□□□□ -1.94
AL355112.1-201ENST00000550309 SNRPD3P62318 126 aaKnown RBP2.92□□□□□ -1.94
AL355112.1-201ENST00000550309 DEFB135Q30KP9 77 aa2.92□□□□□ -1.94
AL355112.1-201ENST00000550309 Q8TAT8 98 aa2.92□□□□□ -1.94
AL355112.1-201ENST00000550309 TMEM141Q96I45 108 aa2.92□□□□□ -1.94
AL355112.1-201ENST00000550309 KLKP1Q107X0 134 aa2.91□□□□□ -1.94
AL355112.1-201ENST00000550309 SFTA2Q6UW10 78 aa2.91□□□□□ -1.94
AL355112.1-201ENST00000550309 CYSTM1Q9H1C7 97 aa2.91□□□□□ -1.94
AL355112.1-201ENST00000550309 LENEPQ9Y5L5 61 aa2.91□□□□□ -1.94
AL355112.1-201ENST00000550309 COL7A1Q02388 2944 aa2.91□□□□□ -1.94
AL355112.1-201ENST00000550309 DNAH7Q8WXX0 4024 aa2.9□□□□□ -1.94
AL355112.1-201ENST00000550309 A0A0G2JQZ4 141 aa2.9□□□□□ -1.95
AL355112.1-201ENST00000550309 TRBV6-5A0A0K0K1A5 114 aa2.9□□□□□ -1.95
AL355112.1-201ENST00000550309 LCE6AA0A183 80 aa2.9□□□□□ -1.95
AL355112.1-201ENST00000550309 TIMM17BO60830 172 aa2.9□□□□□ -1.95
AL355112.1-201ENST00000550309 CCKP06307 115 aa2.9□□□□□ -1.95
AL355112.1-201ENST00000550309 POLR2KP53803 58 aaKnown RBP2.9□□□□□ -1.95
AL355112.1-201ENST00000550309 DEFB131AP59861 70 aa2.9□□□□□ -1.95
AL355112.1-201ENST00000550309 C2orf82Q6UX34 121 aa2.9□□□□□ -1.95
AL355112.1-201ENST00000550309 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.9□□□□□ -1.95
AL355112.1-201ENST00000550309 TIMM21Q9BVV7 248 aa2.9□□□□□ -1.95
AL355112.1-201ENST00000550309 H7BZZ5 65 aa2.89□□□□□ -1.95
AL355112.1-201ENST00000550309 MIFP14174 115 aa2.89□□□□□ -1.95
AL355112.1-201ENST00000550309 SPANXN1Q5VSR9 72 aa2.89□□□□□ -1.95
AL355112.1-201ENST00000550309 Q6JHZ5 121 aa2.89□□□□□ -1.95
AL355112.1-201ENST00000550309 MUSTN1Q8IVN3 82 aa2.89□□□□□ -1.95
AL355112.1-201ENST00000550309 RPL39LQ96EH5 51 aaKnown RBP2.89□□□□□ -1.95
AL355112.1-201ENST00000550309 TRGV4A0A0C4DH28 118 aa2.88□□□□□ -1.95
AL355112.1-201ENST00000550309 RHOHQ15669 191 aa2.88□□□□□ -1.95
AL355112.1-201ENST00000550309 Q1T7F1 81 aa2.88□□□□□ -1.95
AL355112.1-201ENST00000550309 ESRGQ1W209 222 aa2.88□□□□□ -1.95
AL355112.1-201ENST00000550309 TRAV13-2A0A0B4J235 113 aa2.87□□□□□ -1.95
AL355112.1-201ENST00000550309 LY6G6CO95867 125 aa2.87□□□□□ -1.95
AL355112.1-201ENST00000550309 COX6CP09669 75 aa2.87□□□□□ -1.95
AL355112.1-201ENST00000550309 PRB4P10163 310 aaPredicted RBP2.87□□□□□ -1.95
AL355112.1-201ENST00000550309 ATP5EP2Q5VTU8 51 aa2.87□□□□□ -1.95
AL355112.1-201ENST00000550309 C22orf24Q9Y442 160 aa2.87□□□□□ -1.95
AL355112.1-201ENST00000550309 STARD9Q9P2P6 4700 aa2.87□□□□□ -1.95
AL355112.1-201ENST00000550309 LYSTQ99698 3801 aa2.86□□□□□ -1.95
AL355112.1-201ENST00000550309 ALMS1Q8TCU4 4167 aa2.86□□□□□ -1.95
AL355112.1-201ENST00000550309 TRAV10A0A0B4J240 114 aa2.86□□□□□ -1.95
AL355112.1-201ENST00000550309 TRAV21A0A0B4J279 112 aa2.86□□□□□ -1.95
AL355112.1-201ENST00000550309 TRBV10-3A0A0K0K1G6 114 aa2.86□□□□□ -1.95
AL355112.1-201ENST00000550309 I3L3M4 83 aa2.86□□□□□ -1.95
AL355112.1-201ENST00000550309 IGKV4-1P06312 121 aa2.86□□□□□ -1.95
AL355112.1-201ENST00000550309 RNASE3P12724 160 aaKnown RBP2.86□□□□□ -1.95
AL355112.1-201ENST00000550309 TPRXLQ17RH7 258 aa2.86□□□□□ -1.95
AL355112.1-201ENST00000550309 LYPD5Q6UWN5 251 aa2.86□□□□□ -1.95
AL355112.1-201ENST00000550309 C7orf65Q6ZTY9 151 aa2.86□□□□□ -1.95
AL355112.1-201ENST00000550309 LINC00467Q9BRT7 94 aa2.86□□□□□ -1.95
AL355112.1-201ENST00000550309 KMT2CQ8NEZ4 4911 aaKnown RBP2.86□□□□□ -1.95
AL355112.1-201ENST00000550309 DYNC2H1Q8NCM8 4307 aaKnown RBP2.85□□□□□ -1.95
AL355112.1-201ENST00000550309 SPART-AS1P0CW21 52 aa2.85□□□□□ -1.95
AL355112.1-201ENST00000550309 RPL39P62891 51 aaKnown RBP2.85□□□□□ -1.95
AL355112.1-201ENST00000550309 ATP11AUNQ6ZP68 121 aa2.85□□□□□ -1.95
AL355112.1-201ENST00000550309 CLEC2BQ92478 149 aa2.85□□□□□ -1.95
AL355112.1-201ENST00000550309 DIRC1Q969H9 104 aa2.85□□□□□ -1.95
AL355112.1-201ENST00000550309 OBSCN-AS1Q96MR7 158 aa2.85□□□□□ -1.95
AL355112.1-201ENST00000550309 DEFB131BA0A096LNP1 70 aa2.84□□□□□ -1.95
AL355112.1-201ENST00000550309 DEFB4AO15263 64 aa2.84□□□□□ -1.95
AL355112.1-201ENST00000550309 MGPP08493 103 aa2.84□□□□□ -1.95
AL355112.1-201ENST00000550309 RBM3P98179 157 aaKnown RBP2.84□□□□□ -1.95
AL355112.1-201ENST00000550309 UBE2DNLQ8IWF7 75 aa2.84□□□□□ -1.95
AL355112.1-201ENST00000550309 C9orf163Q8N9P6 203 aa2.84□□□□□ -1.95
AL355112.1-201ENST00000550309 UBE2D4Q9Y2X8 147 aa2.84□□□□□ -1.95
AL355112.1-201ENST00000550309 SACSQ9NZJ4 4579 aa2.84□□□□□ -1.96
AL355112.1-201ENST00000550309 RYR3Q15413 4870 aa2.84□□□□□ -1.96
AL355112.1-201ENST00000550309 CSMD3Q7Z407 3707 aa2.83□□□□□ -1.96
AL355112.1-201ENST00000550309 MUC4Q99102 2169 aa2.83□□□□□ -1.96
AL355112.1-201ENST00000550309 M0QY20 66 aa2.83□□□□□ -1.96
AL355112.1-201ENST00000550309 NDUFA1O15239 70 aa2.83□□□□□ -1.96
AL355112.1-201ENST00000550309 ERC2-IT1O76042 136 aa2.83□□□□□ -1.96
AL355112.1-201ENST00000550309 BAALC-AS2P0C853 105 aa2.83□□□□□ -1.96
AL355112.1-201ENST00000550309 SPINK13Q1W4C9 94 aa2.83□□□□□ -1.96
AL355112.1-201ENST00000550309 ASB16-AS1Q495Z4 193 aa2.83□□□□□ -1.96
AL355112.1-201ENST00000550309 S100A7L2Q5SY68 101 aa2.83□□□□□ -1.96
AL355112.1-201ENST00000550309 LINC00474Q9P2X8 69 aa2.83□□□□□ -1.96
AL355112.1-201ENST00000550309 NDUFA12Q9UI09 145 aa2.83□□□□□ -1.96
AL355112.1-201ENST00000550309 RYR2Q92736 4967 aa2.83□□□□□ -1.96
AL355112.1-201ENST00000550309 A6NN06 94 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms