RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 LRRC7Q96NW7 1537 aa-2.15□□□□□ -2.75
DEPDC4-205ENST00000548313 ACACBO00763 2458 aa-2.16□□□□□ -2.75
DEPDC4-205ENST00000548313 C5orf42Q9H799 3197 aa-2.16□□□□□ -2.76
DEPDC4-205ENST00000548313 EYSQ5T1H1 3165 aa-2.17□□□□□ -2.76
DEPDC4-205ENST00000548313 FAUP35544 74 aaKnown RBP-2.18□□□□□ -2.76
DEPDC4-205ENST00000548313 CFAP46Q8IYW2 2715 aa-2.19□□□□□ -2.76
DEPDC4-205ENST00000548313 KRTAP19-5Q3LI72 72 aa-2.19□□□□□ -2.76
DEPDC4-205ENST00000548313 RGPD1P0DJD0 1748 aa-2.2□□□□□ -2.76
DEPDC4-205ENST00000548313 S100PP25815 95 aa-2.2□□□□□ -2.76
DEPDC4-205ENST00000548313 DPY30Q9C005 99 aa-2.2□□□□□ -2.76
DEPDC4-205ENST00000548313 SRCAPQ6ZRS2 3230 aa-2.2□□□□□ -2.76
DEPDC4-205ENST00000548313 SUPT6HQ7KZ85 1726 aaKnown RBP-2.2□□□□□ -2.76
DEPDC4-205ENST00000548313 CSMD1Q96PZ7 3565 aa-2.2□□□□□ -2.76
DEPDC4-205ENST00000548313 ATP7BP35670 1465 aa-2.21□□□□□ -2.76
DEPDC4-205ENST00000548313 PLXNC1O60486 1568 aa-2.22□□□□□ -2.76
DEPDC4-205ENST00000548313 A0A1B0GUT8 65 aa-2.22□□□□□ -2.76
DEPDC4-205ENST00000548313 C14orf144Q96I85 54 aa-2.22□□□□□ -2.76
DEPDC4-205ENST00000548313 GAFA1Q96PS6 74 aa-2.22□□□□□ -2.76
DEPDC4-205ENST00000548313 TCEAL7Q9BRU2 100 aa-2.23□□□□□ -2.77
DEPDC4-205ENST00000548313 TRRAPQ9Y4A5 3859 aa-2.23□□□□□ -2.77
DEPDC4-205ENST00000548313 MYO9AB2RTY4 2548 aa-2.23□□□□□ -2.77
DEPDC4-205ENST00000548313 MAP3K1Q13233 1512 aa-2.23□□□□□ -2.77
DEPDC4-205ENST00000548313 ATP10BO94823 1461 aa-2.24□□□□□ -2.77
DEPDC4-205ENST00000548313 PLGLAQ15195 96 aa-2.24□□□□□ -2.77
DEPDC4-205ENST00000548313 LRBAP50851 2863 aa-2.25□□□□□ -2.77
DEPDC4-205ENST00000548313 IQCF6A8MYZ5 107 aa-2.25□□□□□ -2.77
DEPDC4-205ENST00000548313 HMGN2P05204 90 aaKnown RBP-2.25□□□□□ -2.77
DEPDC4-205ENST00000548313 C3orf79P0CE67 100 aa-2.25□□□□□ -2.77
DEPDC4-205ENST00000548313 CNTLNQ9NXG0 1405 aa-2.25□□□□□ -2.77
DEPDC4-205ENST00000548313 SMG1Q96Q15 3661 aaKnown RBP-2.26□□□□□ -2.77
DEPDC4-205ENST00000548313 RGPD3A6NKT7 1758 aaPredicted RBP-2.26□□□□□ -2.77
DEPDC4-205ENST00000548313 RGPD4Q7Z3J3 1758 aa-2.26□□□□□ -2.77
DEPDC4-205ENST00000548313 DNAH17Q9UFH2 4485 aa-2.26□□□□□ -2.77
DEPDC4-205ENST00000548313 RANBP2P49792 3224 aaKnown RBP-2.27□□□□□ -2.77
DEPDC4-205ENST00000548313 MT1EP04732 61 aa-2.27□□□□□ -2.77
DEPDC4-205ENST00000548313 DNAH5Q8TE73 4624 aa-2.27□□□□□ -2.77
DEPDC4-205ENST00000548313 MYO3AQ8NEV4 1616 aa-2.28□□□□□ -2.77
DEPDC4-205ENST00000548313 USP32Q8NFA0 1604 aa-2.28□□□□□ -2.77
DEPDC4-205ENST00000548313 POLR1AO95602 1720 aaPredicted RBP-2.28□□□□□ -2.77
DEPDC4-205ENST00000548313 SCN11AQ9UI33 1791 aa-2.28□□□□□ -2.77
DEPDC4-205ENST00000548313 PRO3102Q9H379 93 aa-2.28□□□□□ -2.77
DEPDC4-205ENST00000548313 NESP48681 1621 aa-2.28□□□□□ -2.77
DEPDC4-205ENST00000548313 CYB5AP00167 134 aa-2.29□□□□□ -2.78
DEPDC4-205ENST00000548313 SMIM11AP58511 58 aa-2.29□□□□□ -2.78
DEPDC4-205ENST00000548313 CLPSL2Q6UWE3 100 aa-2.29□□□□□ -2.78
DEPDC4-205ENST00000548313 ACBD7Q8N6N7 88 aa-2.29□□□□□ -2.78
DEPDC4-205ENST00000548313 DYNC2H1Q8NCM8 4307 aaKnown RBP-2.29□□□□□ -2.78
DEPDC4-205ENST00000548313 ITPR2Q14571 2701 aa-2.29□□□□□ -2.78
DEPDC4-205ENST00000548313 WIZO95785 1651 aa-2.31□□□□□ -2.78
DEPDC4-205ENST00000548313 TLN2Q9Y4G6 2542 aa-2.31□□□□□ -2.78
DEPDC4-205ENST00000548313 BPTFQ12830 3046 aa-2.31□□□□□ -2.78
DEPDC4-205ENST00000548313 MT1LQ93083 61 aa-2.31□□□□□ -2.78
DEPDC4-205ENST00000548313 LTN1O94822 1766 aa-2.31□□□□□ -2.78
DEPDC4-205ENST00000548313 NWD1Q149M9 1564 aa-2.32□□□□□ -2.78
DEPDC4-205ENST00000548313 BAZ1AQ9NRL2 1556 aaPredicted RBP-2.32□□□□□ -2.78
DEPDC4-205ENST00000548313 MT1GP13640 62 aa-2.32□□□□□ -2.78
DEPDC4-205ENST00000548313 RBP2P50120 134 aa-2.32□□□□□ -2.78
DEPDC4-205ENST00000548313 KRTAP20-1Q3LI63 56 aa-2.32□□□□□ -2.78
DEPDC4-205ENST00000548313 UBR1Q8IWV7 1749 aa-2.33□□□□□ -2.78
DEPDC4-205ENST00000548313 LINC00158P58513 81 aa-2.33□□□□□ -2.78
DEPDC4-205ENST00000548313 PRLHP81277 87 aa-2.33□□□□□ -2.78
DEPDC4-205ENST00000548313 MT1MQ8N339 61 aa-2.33□□□□□ -2.78
DEPDC4-205ENST00000548313 PEA15Q15121 130 aa-2.34□□□□□ -2.78
DEPDC4-205ENST00000548313 TRAV21A0A0B4J279 112 aa-2.35□□□□□ -2.79
DEPDC4-205ENST00000548313 ATP6V1G2-DDX39BF2Z307 99 aa-2.35□□□□□ -2.79
DEPDC4-205ENST00000548313 MT2AP02795 61 aa-2.35□□□□□ -2.79
DEPDC4-205ENST00000548313 SMR3BP02814 79 aaPredicted RBP-2.35□□□□□ -2.79
DEPDC4-205ENST00000548313 MT1BP07438 61 aa-2.35□□□□□ -2.79
DEPDC4-205ENST00000548313 DEPDC5O75140 1603 aa-2.36□□□□□ -2.79
DEPDC4-205ENST00000548313 DNAH10Q8IVF4 4471 aa-2.36□□□□□ -2.79
DEPDC4-205ENST00000548313 ANKRD26Q9UPS8 1709 aa-2.37□□□□□ -2.79
DEPDC4-205ENST00000548313 NEXMIFQ5QGS0 1516 aa-2.37□□□□□ -2.79
DEPDC4-205ENST00000548313 GYPAP02724 150 aa-2.37□□□□□ -2.79
DEPDC4-205ENST00000548313 WFDC9Q8NEX5 89 aa-2.37□□□□□ -2.79
DEPDC4-205ENST00000548313 CEP170BQ9Y4F5 1589 aaPredicted RBP-2.37□□□□□ -2.79
DEPDC4-205ENST00000548313 TLN1Q9Y490 2541 aaKnown RBP-2.38□□□□□ -2.79
DEPDC4-205ENST00000548313 NCMAPQ5T1S8 102 aa-2.39□□□□□ -2.79
DEPDC4-205ENST00000548313 DOT1LQ8TEK3 1739 aa-2.39□□□□□ -2.79
DEPDC4-205ENST00000548313 CEP162Q5TB80 1403 aa-2.4□□□□□ -2.79
DEPDC4-205ENST00000548313 SPTAN1Q13813 2472 aaKnown RBP-2.4□□□□□ -2.79
DEPDC4-205ENST00000548313 DMXL2Q8TDJ6 3036 aa-2.41□□□□□ -2.79
DEPDC4-205ENST00000548313 MAGI3Q5TCQ9 1506 aa-2.42□□□□□ -2.8
DEPDC4-205ENST00000548313 SPTBN5Q9NRC6 3674 aaKnown RBP-2.43□□□□□ -2.8
DEPDC4-205ENST00000548313 M0R143 59 aa-2.43□□□□□ -2.8
DEPDC4-205ENST00000548313 NDUFB1O75438 58 aa-2.43□□□□□ -2.8
DEPDC4-205ENST00000548313 C20orf78Q9BR46 151 aa-2.43□□□□□ -2.8
DEPDC4-205ENST00000548313 CDC42BPGQ6DT37 1551 aa-2.44□□□□□ -2.8
DEPDC4-205ENST00000548313 PLIN4Q96Q06 1357 aa-2.45□□□□□ -2.8
DEPDC4-205ENST00000548313 SPENQ96T58 3664 aaKnown RBP-2.45□□□□□ -2.8
DEPDC4-205ENST00000548313 LCE6AA0A183 80 aa-2.45□□□□□ -2.8
DEPDC4-205ENST00000548313 ABCC10Q5T3U5 1492 aa-2.45□□□□□ -2.8
DEPDC4-205ENST00000548313 MYMXA0A1B0GTQ4 84 aa-2.46□□□□□ -2.8
DEPDC4-205ENST00000548313 PEG3Q9GZU2 1588 aa-2.46□□□□□ -2.8
DEPDC4-205ENST00000548313 AKAP12Q02952 1782 aa-2.46□□□□□ -2.8
DEPDC4-205ENST00000548313 LYNX1G3V0Z9 82 aa-2.47□□□□□ -2.8
DEPDC4-205ENST00000548313 TNP1P09430 55 aa-2.47□□□□□ -2.8
DEPDC4-205ENST00000548313 TMEM131LA2VDJ0 1609 aa-2.48□□□□□ -2.81
DEPDC4-205ENST00000548313 DEFB106AQ8N104 65 aa-2.48□□□□□ -2.81
DEPDC4-205ENST00000548313 ATMQ13315 3056 aa-2.48□□□□□ -2.81
DEPDC4-205ENST00000548313 VPS8Q8N3P4 1428 aa-2.51□□□□□ -2.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms