RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 CFAP54Q96N23 3096 aa4.46□□□□□ -1.69
SRGAP1-206ENST00000543397 A0A1W2PNN7 141 aa4.46□□□□□ -1.7
SRGAP1-206ENST00000543397 Q1T7F1 81 aa4.46□□□□□ -1.7
SRGAP1-206ENST00000543397 LAMA5O15230 3695 aa4.45□□□□□ -1.7
SRGAP1-206ENST00000543397 PRO0461Q9UI25 63 aa4.45□□□□□ -1.7
SRGAP1-206ENST00000543397 IGFL1Q6UW32 110 aa4.44□□□□□ -1.7
SRGAP1-206ENST00000543397 ANAPC11Q9NYG5 84 aa4.44□□□□□ -1.7
SRGAP1-206ENST00000543397 SMCPP49901 116 aaPredicted RBP4.44□□□□□ -1.7
SRGAP1-206ENST00000543397 H7BZZ5 65 aa4.44□□□□□ -1.7
SRGAP1-206ENST00000543397 LAMA2P24043 3122 aaKnown RBP4.44□□□□□ -1.7
SRGAP1-206ENST00000543397 MRPL34Q9BQ48 92 aaKnown RBP4.44□□□□□ -1.7
SRGAP1-206ENST00000543397 CSAG1Q6PB30 78 aa4.43□□□□□ -1.7
SRGAP1-206ENST00000543397 ADM2Q7Z4H4 148 aa4.43□□□□□ -1.7
SRGAP1-206ENST00000543397 C9orf92A6NGG3 77 aa4.43□□□□□ -1.7
SRGAP1-206ENST00000543397 A0A1B0GU69 56 aa4.43□□□□□ -1.7
SRGAP1-206ENST00000543397 OBSCN-AS1Q96MR7 158 aa4.43□□□□□ -1.7
SRGAP1-206ENST00000543397 DMAC1Q96GE9 116 aa4.42□□□□□ -1.7
SRGAP1-206ENST00000543397 SPRR4Q96PI1 79 aa4.42□□□□□ -1.7
SRGAP1-206ENST00000543397 Q8N377 158 aa4.42□□□□□ -1.7
SRGAP1-206ENST00000543397 DSCR10P59022 87 aa4.41□□□□□ -1.7
SRGAP1-206ENST00000543397 KLKP1Q107X0 134 aa4.41□□□□□ -1.7
SRGAP1-206ENST00000543397 XIRP2A4UGR9 3374 aa4.41□□□□□ -1.7
SRGAP1-206ENST00000543397 K7EQZ3 153 aa4.41□□□□□ -1.7
SRGAP1-206ENST00000543397 NSD1Q96L73 2696 aaPredicted RBP4.4□□□□□ -1.7
SRGAP1-206ENST00000543397 UQCR11O14957 56 aa4.4□□□□□ -1.71
SRGAP1-206ENST00000543397 KRTAP23-1A1A580 65 aa4.39□□□□□ -1.71
SRGAP1-206ENST00000543397 A0A1B0GVX0 72 aa4.39□□□□□ -1.71
SRGAP1-206ENST00000543397 STAB2Q8WWQ8 2551 aa4.39□□□□□ -1.71
SRGAP1-206ENST00000543397 A0A0G2JQZ4 141 aa4.38□□□□□ -1.71
SRGAP1-206ENST00000543397 FLNCQ14315 2725 aa4.38□□□□□ -1.71
SRGAP1-206ENST00000543397 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.38□□□□□ -1.71
SRGAP1-206ENST00000543397 ITPR2Q14571 2701 aa4.37□□□□□ -1.71
SRGAP1-206ENST00000543397 FRYQ5TBA9 3013 aa4.36□□□□□ -1.71
SRGAP1-206ENST00000543397 LCE6AA0A183 80 aa4.36□□□□□ -1.71
SRGAP1-206ENST00000543397 REV3LO60673 3130 aa4.36□□□□□ -1.71
SRGAP1-206ENST00000543397 VPS13AQ96RL7 3174 aa4.36□□□□□ -1.71
SRGAP1-206ENST00000543397 NBPF19A0A087WUL8 3843 aa4.36□□□□□ -1.71
SRGAP1-206ENST00000543397 NOTCH2NLQ7Z3S9 236 aa4.35□□□□□ -1.71
SRGAP1-206ENST00000543397 ASB16-AS1Q495Z4 193 aa4.35□□□□□ -1.71
SRGAP1-206ENST00000543397 ITPR1Q14643 2758 aa4.34□□□□□ -1.71
SRGAP1-206ENST00000543397 DMBT1Q9UGM3 2413 aaPredicted RBP4.34□□□□□ -1.71
SRGAP1-206ENST00000543397 FAM104AQ969W3 186 aa4.33□□□□□ -1.72
SRGAP1-206ENST00000543397 FLG2Q5D862 2391 aaPredicted RBP4.33□□□□□ -1.72
SRGAP1-206ENST00000543397 ROMO1P60602 79 aa4.32□□□□□ -1.72
SRGAP1-206ENST00000543397 PLAC8Q9NZF1 115 aa4.32□□□□□ -1.72
SRGAP1-206ENST00000543397 A6NN06 94 aa4.32□□□□□ -1.72
SRGAP1-206ENST00000543397 A0A1W2PNM2 257 aa4.32□□□□□ -1.72
SRGAP1-206ENST00000543397 Q6ZSA8 131 aa4.32□□□□□ -1.72
SRGAP1-206ENST00000543397 FRYLO94915 3013 aa4.31□□□□□ -1.72
SRGAP1-206ENST00000543397 NBEAL2Q6ZNJ1 2754 aa4.31□□□□□ -1.72
SRGAP1-206ENST00000543397 CDH23Q9H251 3354 aa4.31□□□□□ -1.72
SRGAP1-206ENST00000543397 TACC2O95359 2948 aa4.31□□□□□ -1.72
SRGAP1-206ENST00000543397 LINC00483Q53H64 154 aa4.3□□□□□ -1.72
SRGAP1-206ENST00000543397 IGLV5-48A0A075B6I7 105 aa4.3□□□□□ -1.72
SRGAP1-206ENST00000543397 EYSQ5T1H1 3165 aa4.3□□□□□ -1.72
SRGAP1-206ENST00000543397 KRTAP1-5Q9BYS1 174 aa4.29□□□□□ -1.72
SRGAP1-206ENST00000543397 COL12A1Q99715 3063 aa4.29□□□□□ -1.72
SRGAP1-206ENST00000543397 HIVEP1P15822 2718 aa4.28□□□□□ -1.72
SRGAP1-206ENST00000543397 LINC01600Q96MT4 127 aa4.28□□□□□ -1.72
SRGAP1-206ENST00000543397 TENM4Q6N022 2769 aa4.28□□□□□ -1.72
SRGAP1-206ENST00000543397 Q5VSD8 79 aa4.28□□□□□ -1.72
SRGAP1-206ENST00000543397 ATMQ13315 3056 aa4.27□□□□□ -1.73
SRGAP1-206ENST00000543397 Q5VV11 94 aa4.27□□□□□ -1.73
SRGAP1-206ENST00000543397 CRIPTQ9P021 101 aa4.27□□□□□ -1.73
SRGAP1-206ENST00000543397 CSMD2Q7Z408 3487 aa4.27□□□□□ -1.73
SRGAP1-206ENST00000543397 COA5Q86WW8 74 aa4.26□□□□□ -1.73
SRGAP1-206ENST00000543397 M0R2T5 61 aa4.26□□□□□ -1.73
SRGAP1-206ENST00000543397 CYSTM1Q9H1C7 97 aa4.25□□□□□ -1.73
SRGAP1-206ENST00000543397 KRTAP25-1Q3LHN0 102 aa4.25□□□□□ -1.73
SRGAP1-206ENST00000543397 C20orf166-AS1Q96NR2 134 aa4.25□□□□□ -1.73
SRGAP1-206ENST00000543397 KRTAP10-1P60331 282 aa4.24□□□□□ -1.73
SRGAP1-206ENST00000543397 KRTAP10-2P60368 255 aa4.24□□□□□ -1.73
SRGAP1-206ENST00000543397 KMT2BQ9UMN6 2715 aaPredicted RBP4.24□□□□□ -1.73
SRGAP1-206ENST00000543397 Q8N1X5 172 aa4.24□□□□□ -1.73
SRGAP1-206ENST00000543397 KRTAP21-3Q3LHN1 58 aa4.23□□□□□ -1.73
SRGAP1-206ENST00000543397 LAMA1P25391 3075 aa4.23□□□□□ -1.73
SRGAP1-206ENST00000543397 SZT2Q5T011 3432 aa4.23□□□□□ -1.73
SRGAP1-206ENST00000543397 SPRR1AP35321 89 aa4.22□□□□□ -1.73
SRGAP1-206ENST00000543397 MYO15AQ9UKN7 3530 aa4.22□□□□□ -1.73
SRGAP1-206ENST00000543397 RELNP78509 3460 aa4.22□□□□□ -1.73
SRGAP1-206ENST00000543397 Q6ZR54 194 aa4.21□□□□□ -1.74
SRGAP1-206ENST00000543397 UTP20O75691 2785 aaKnown RBP4.21□□□□□ -1.74
SRGAP1-206ENST00000543397 DMXL2Q8TDJ6 3036 aa4.21□□□□□ -1.74
SRGAP1-206ENST00000543397 KRTAP26-1Q6PEX3 210 aa4.19□□□□□ -1.74
SRGAP1-206ENST00000543397 LINC01558Q9Y6Z2 57 aa4.19□□□□□ -1.74
SRGAP1-206ENST00000543397 COL6A3P12111 3177 aa4.19□□□□□ -1.74
SRGAP1-206ENST00000543397 Q8NDZ9 215 aa4.18□□□□□ -1.74
SRGAP1-206ENST00000543397 CSMD1Q96PZ7 3565 aa4.18□□□□□ -1.74
SRGAP1-206ENST00000543397 CELSR3Q9NYQ7 3312 aa4.18□□□□□ -1.74
SRGAP1-206ENST00000543397 BOD1L1Q8NFC6 3051 aa4.18□□□□□ -1.74
SRGAP1-206ENST00000543397 DMDP11532 3685 aa4.18□□□□□ -1.74
SRGAP1-206ENST00000543397 SPRR1BP22528 89 aa4.18□□□□□ -1.74
SRGAP1-206ENST00000543397 NIPBLQ6KC79 2804 aaeCLIP4.18□□□□□ -1.74
SRGAP1-206ENST00000543397 APCP25054 2843 aa4.17□□□□□ -1.74
SRGAP1-206ENST00000543397 Q8N9P0 234 aaPredicted RBP4.17□□□□□ -1.74
SRGAP1-206ENST00000543397 CRYBG3Q68DQ2 2970 aa4.16□□□□□ -1.74
SRGAP1-206ENST00000543397 ZCCHC13Q8WW36 166 aaKnown RBP4.16□□□□□ -1.74
SRGAP1-206ENST00000543397 ZZEF1O43149 2961 aa4.16□□□□□ -1.74
SRGAP1-206ENST00000543397 A8MUU9 505 aa4.16□□□□□ -1.74
SRGAP1-206ENST00000543397 ADGRG4Q8IZF6 3080 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms