RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 FLG2Q5D862 2391 aaPredicted RBP10.18□□□□□ -0.78
SCARB1-205ENST00000538291 Q75L30 129 aa10.18□□□□□ -0.78
SCARB1-205ENST00000538291 R4GN34 69 aa10.17□□□□□ -0.78
SCARB1-205ENST00000538291 LINC01558Q9Y6Z2 57 aa10.16□□□□□ -0.78
SCARB1-205ENST00000538291 KRTAP10-1P60331 282 aa10.15□□□□□ -0.79
SCARB1-205ENST00000538291 CENPEQ02224 2701 aa10.15□□□□□ -0.79
SCARB1-205ENST00000538291 TEP1Q99973 2627 aaKnown RBP10.14□□□□□ -0.79
SCARB1-205ENST00000538291 KRTAP10-2P60368 255 aa10.1□□□□□ -0.79
SCARB1-205ENST00000538291 GOLGB1Q14789 3259 aaKnown RBP10.09□□□□□ -0.79
SCARB1-205ENST00000538291 AKAP13Q12802 2813 aa10.09□□□□□ -0.79
SCARB1-205ENST00000538291 KRTAP26-1Q6PEX3 210 aa10.07□□□□□ -0.8
SCARB1-205ENST00000538291 TEX15Q9BXT5 2789 aa10.07□□□□□ -0.8
SCARB1-205ENST00000538291 NBEAL1Q6ZS30 2694 aa10.07□□□□□ -0.8
SCARB1-205ENST00000538291 FP248Q71RG6 208 aaPredicted RBP10.03□□□□□ -0.8
SCARB1-205ENST00000538291 CHD6Q8TD26 2715 aa10.01□□□□□ -0.81
SCARB1-205ENST00000538291 COL6A5A8TX70 2615 aa10.01□□□□□ -0.81
SCARB1-205ENST00000538291 CEP350Q5VT06 3117 aa10□□□□□ -0.81
SCARB1-205ENST00000538291 OXTP01178 125 aa9.98□□□□□ -0.81
SCARB1-205ENST00000538291 M0QZ58 72 aa9.95□□□□□ -0.82
SCARB1-205ENST00000538291 RPL37P61927 97 aaKnown RBP9.94□□□□□ -0.82
SCARB1-205ENST00000538291 UNC79Q9P2D8 2635 aa9.93□□□□□ -0.82
SCARB1-205ENST00000538291 Q6ZR54 194 aa9.93□□□□□ -0.82
SCARB1-205ENST00000538291 DNAH12Q6ZR08 3092 aa9.91□□□□□ -0.82
SCARB1-205ENST00000538291 Q5VV11 94 aa9.89□□□□□ -0.83
SCARB1-205ENST00000538291 PANO1I0J062 215 aa9.88□□□□□ -0.83
SCARB1-205ENST00000538291 PLAC4Q8WY50 150 aa9.88□□□□□ -0.83
SCARB1-205ENST00000538291 PRAC1Q96KF2 57 aa9.87□□□□□ -0.83
SCARB1-205ENST00000538291 NOTCH1P46531 2555 aa9.87□□□□□ -0.83
SCARB1-205ENST00000538291 H1FX-AS1Q4G0G2 97 aa9.84□□□□□ -0.83
SCARB1-205ENST00000538291 CYSTM1Q9H1C7 97 aa9.84□□□□□ -0.83
SCARB1-205ENST00000538291 DMBT1Q9UGM3 2413 aaPredicted RBP9.84□□□□□ -0.83
SCARB1-205ENST00000538291 KRTAP4-16G5E9R7 235 aaPredicted RBP9.84□□□□□ -0.83
SCARB1-205ENST00000538291 ROMO1P60602 79 aa9.83□□□□□ -0.84
SCARB1-205ENST00000538291 Q5XG85 94 aa9.82□□□□□ -0.84
SCARB1-205ENST00000538291 A0A087X002 238 aa9.82□□□□□ -0.84
SCARB1-205ENST00000538291 A0A0A0MQY5 61 aa9.81□□□□□ -0.84
SCARB1-205ENST00000538291 ADM2Q7Z4H4 148 aa9.8□□□□□ -0.84
SCARB1-205ENST00000538291 C5orf42Q9H799 3197 aa9.8□□□□□ -0.84
SCARB1-205ENST00000538291 STAB2Q8WWQ8 2551 aa9.78□□□□□ -0.84
SCARB1-205ENST00000538291 GCN1Q92616 2671 aaKnown RBP9.77□□□□□ -0.84
SCARB1-205ENST00000538291 BAHCC1Q9P281 2608 aa9.77□□□□□ -0.85
SCARB1-205ENST00000538291 CHD7Q9P2D1 2997 aa9.75□□□□□ -0.85
SCARB1-205ENST00000538291 ZNF292O60281 2723 aa9.72□□□□□ -0.85
SCARB1-205ENST00000538291 KRTAP29-1A8MX34 341 aaPredicted RBP9.72□□□□□ -0.85
SCARB1-205ENST00000538291 RPS29P62273 56 aaKnown RBP9.69□□□□□ -0.86
SCARB1-205ENST00000538291 SPATA8Q6RVD6 105 aa9.68□□□□□ -0.86
SCARB1-205ENST00000538291 ASB16-AS1Q495Z4 193 aa9.66□□□□□ -0.86
SCARB1-205ENST00000538291 MGAQ8IWI9 3026 aa9.64□□□□□ -0.87
SCARB1-205ENST00000538291 Q6ZRN7 208 aaPredicted RBP9.64□□□□□ -0.87
SCARB1-205ENST00000538291 NOTCH2NLQ7Z3S9 236 aa9.61□□□□□ -0.87
SCARB1-205ENST00000538291 UBR5O95071 2799 aaPredicted RBP9.61□□□□□ -0.87
SCARB1-205ENST00000538291 CHD9Q3L8U1 2897 aa9.59□□□□□ -0.87
SCARB1-205ENST00000538291 KRTAP11-1Q8IUC1 163 aa9.58□□□□□ -0.88
SCARB1-205ENST00000538291 NSD1Q96L73 2696 aaPredicted RBP9.56□□□□□ -0.88
SCARB1-205ENST00000538291 IGSF10Q6WRI0 2623 aa9.56□□□□□ -0.88
SCARB1-205ENST00000538291 MAP1AP78559 2803 aaPredicted RBP9.55□□□□□ -0.88
SCARB1-205ENST00000538291 NBEAL2Q6ZNJ1 2754 aa9.55□□□□□ -0.88
SCARB1-205ENST00000538291 KRTAP21-3Q3LHN1 58 aa9.54□□□□□ -0.88
SCARB1-205ENST00000538291 PCNTO95613 3336 aa9.52□□□□□ -0.89
SCARB1-205ENST00000538291 A8MUU9 505 aa9.52□□□□□ -0.89
SCARB1-205ENST00000538291 KRTAP13-2Q52LG2 175 aa9.49□□□□□ -0.89
SCARB1-205ENST00000538291 UTRNP46939 3433 aa9.48□□□□□ -0.89
SCARB1-205ENST00000538291 C20orf166-AS1Q96NR2 134 aa9.47□□□□□ -0.89
SCARB1-205ENST00000538291 H3BS24 57 aa9.46□□□□□ -0.9
SCARB1-205ENST00000538291 CFAP54Q96N23 3096 aa9.46□□□□□ -0.9
SCARB1-205ENST00000538291 ITPR2Q14571 2701 aa9.45□□□□□ -0.9
SCARB1-205ENST00000538291 KRTAP7-1Q8IUC3 87 aa9.45□□□□□ -0.9
SCARB1-205ENST00000538291 DSPP15924 2871 aaKnown RBP9.45□□□□□ -0.9
SCARB1-205ENST00000538291 A0A0C4DFX4 3053 aa9.42□□□□□ -0.9
SCARB1-205ENST00000538291 KRTAP13-1Q8IUC0 172 aa9.42□□□□□ -0.9
SCARB1-205ENST00000538291 RANBP2P49792 3224 aaKnown RBP9.38□□□□□ -0.91
SCARB1-205ENST00000538291 A8MU10 97 aa9.36□□□□□ -0.91
SCARB1-205ENST00000538291 FRYQ5TBA9 3013 aa9.33□□□□□ -0.92
SCARB1-205ENST00000538291 TRANK1O15050 2925 aa9.33□□□□□ -0.92
SCARB1-205ENST00000538291 WDFY4Q6ZS81 3184 aa9.3□□□□□ -0.92
SCARB1-205ENST00000538291 ITPR1Q14643 2758 aa9.3□□□□□ -0.92
SCARB1-205ENST00000538291 HTTP42858 3142 aa9.25□□□□□ -0.93
SCARB1-205ENST00000538291 KRTAP25-1Q3LHN0 102 aa9.25□□□□□ -0.93
SCARB1-205ENST00000538291 TNP1P09430 55 aa9.24□□□□□ -0.93
SCARB1-205ENST00000538291 KMT2BQ9UMN6 2715 aaPredicted RBP9.2□□□□□ -0.94
SCARB1-205ENST00000538291 TENM4Q6N022 2769 aa9.18□□□□□ -0.94
SCARB1-205ENST00000538291 PRUNE2Q8WUY3 3088 aa9.17□□□□□ -0.94
SCARB1-205ENST00000538291 A6NN06 94 aa9.15□□□□□ -0.95
SCARB1-205ENST00000538291 HIVEP1P15822 2718 aa9.15□□□□□ -0.95
SCARB1-205ENST00000538291 LAMA3Q16787 3333 aa9.12□□□□□ -0.95
SCARB1-205ENST00000538291 UTP20O75691 2785 aaKnown RBP9.09□□□□□ -0.95
SCARB1-205ENST00000538291 KRTAP16-1A8MUX0 517 aa9.08□□□□□ -0.96
SCARB1-205ENST00000538291 TACC2O95359 2948 aa9.08□□□□□ -0.96
SCARB1-205ENST00000538291 REV3LO60673 3130 aa9.07□□□□□ -0.96
SCARB1-205ENST00000538291 FLNCQ14315 2725 aa9.07□□□□□ -0.96
SCARB1-205ENST00000538291 XP32Q5T750 250 aa9.05□□□□□ -0.96
SCARB1-205ENST00000538291 TRIOO75962 3097 aa9.04□□□□□ -0.96
SCARB1-205ENST00000538291 LAMA2P24043 3122 aaKnown RBP9.04□□□□□ -0.96
SCARB1-205ENST00000538291 APCP25054 2843 aa9.02□□□□□ -0.97
SCARB1-205ENST00000538291 KRTAP1-4P0C5Y4 121 aa9□□□□□ -0.97
SCARB1-205ENST00000538291 KRTAP10-8P60410 259 aa9□□□□□ -0.97
SCARB1-205ENST00000538291 MKI67P46013 3256 aaKnown RBP8.99□□□□□ -0.97
SCARB1-205ENST00000538291 C10orf95Q9H7T3 257 aa8.99□□□□□ -0.97
SCARB1-205ENST00000538291 NIPBLQ6KC79 2804 aaeCLIP8.96□□□□□ -0.98
SCARB1-205ENST00000538291 A0A1B0GVY2 172 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms